FFCP PHASE1:Hg19::chr16:82661826..82661829,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:82661826..82661829,- | |||
|description=CAGE_peak_at_chr16:82661826..82661829,- | |description=CAGE_peak_at_chr16:82661826..82661829,- | ||
|id=chr16:82661826..82661829,- | |id=chr16:82661826..82661829,- | ||
|ontology_enrichment_celltype=CL:0000066!2.22e-18!254;CL:0000220!1.11e-15!246;CL:0002321!2.25e-15!248;CL:0000076!9.36e-14!62;CL:0002076!8.99e-11!43;CL:0002368!1.14e-10!13;CL:0000071!5.85e-09!18;CL:0002546!5.85e-09!18;CL:1000413!1.40e-07!9;CL:0000548!1.66e-07!679;CL:0000004!1.66e-07!679;CL:0000255!1.66e-07!679;CL:0000012!2.57e-07!682;CL:0000222!2.99e-07!119;CL:0000213!5.08e-07!57;CL:0000215!5.08e-07!57;CL:0002139!5.95e-07!24 | |ontology_enrichment_celltype=CL:0000066!2.22e-18!254;CL:0000220!1.11e-15!246;CL:0002321!2.25e-15!248;CL:0000076!9.36e-14!62;CL:0002076!8.99e-11!43;CL:0002368!1.14e-10!13;CL:0000071!5.85e-09!18;CL:0002546!5.85e-09!18;CL:1000413!1.40e-07!9;CL:0000548!1.66e-07!679;CL:0000004!1.66e-07!679;CL:0000255!1.66e-07!679;CL:0000012!2.57e-07!682;CL:0000222!2.99e-07!119;CL:0000213!5.08e-07!57;CL:0000215!5.08e-07!57;CL:0002139!5.95e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002202;8.78e-31;9!CL:0002632;8.78e-31;9!CL:0000307;2.96e-24;3!CL:0002328;6.74e-24;3!CL:0002368;3.43e-21;13!CL:1000746;2.49e-10;7!CL:1000612;2.49e-10;7!CL:0002594;1.57e-08;4!CL:0002076;2.24e-07;42!CL:0000312;3.85e-07;5!CL:0002188;5.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,6.65e-31,9;CL:0002632,6.65e-31,9;CL:0000068,3.62e-24,3;CL:0000069,3.62e-24,3;CL:0002328,3.62e-24,3;CL:0000307,3.62e-24,3;CL:0000377,3.62e-24,3;CL:0002368,2.83e-21,13;CL:0002076,1.06e-13,42;CL:1000746,2.92e-10,7;CL:1000612,2.92e-10,7;CL:0000223,1.52e-09,58;CL:0000066,1.39e-08,253;CL:0002594,1.77e-08,4;CL:0000312,4.43e-07,5;CL:0002188,5.31e-07,5;CL:0000082,9.37e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000377;2.96e-24;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;1.88e-09;1!DOID:3149;1.88e-09;1!DOID:4362;5.47e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.89e-09,1;DOID:3149,1.89e-09,1;DOID:4362,5.00e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001986!5.85e-09!18;UBERON:0004638!5.85e-09!18;UBERON:0004852!5.85e-09!18;UBERON:0001981!1.06e-08!60;UBERON:0007500!1.06e-08!60;UBERON:0004537!1.06e-08!60;UBERON:0006965!1.06e-08!60;UBERON:0000483!2.14e-08!309;UBERON:0001637!2.23e-08!42;UBERON:0003509!2.23e-08!42;UBERON:0004572!2.23e-08!42;UBERON:0003914!3.40e-08!118;UBERON:0000119!3.94e-08!312;UBERON:0004872!6.56e-08!84;UBERON:0003915!1.40e-07!9;UBERON:0004700!1.40e-07!9;UBERON:0001917!1.40e-07!9;UBERON:0000055!2.58e-07!69;UBERON:0002185!5.73e-07!4;UBERON:0002049!8.61e-07!79;UBERON:0007798!8.61e-07!79;UBERON:0000487!8.95e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.74e-24;3!UBERON:0002031;6.74e-24;3!UBERON:0007196;2.62e-18;15!UBERON:0001558;2.62e-18;15!UBERON:0002185;1.39e-14;5!UBERON:0003126;1.01e-10;7!UBERON:0001005;1.01e-10;7!UBERON:0000485;1.43e-10;7!UBERON:0000074;2.49e-10;7!UBERON:0001229;2.49e-10;7!UBERON:0005178;6.68e-10;34!UBERON:0002224;6.68e-10;34!UBERON:0005181;1.79e-09;35!UBERON:0000072;7.58e-09;37!UBERON:0004807;1.34e-08;22!UBERON:0001310;1.57e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.62e-24,3;UBERON:0002031,3.62e-24,3;UBERON:0007196,2.22e-18,15;UBERON:0001558,2.22e-18,15;UBERON:0002185,9.58e-15,5;UBERON:0003126,1.10e-10,7;UBERON:0001005,1.10e-10,7;UBERON:0005178,1.72e-10,34;UBERON:0002224,1.72e-10,34;UBERON:0010532,2.92e-10,7;UBERON:0000074,2.92e-10,7;UBERON:0001229,2.92e-10,7;UBERON:0001230,2.92e-10,7;UBERON:0003220,2.92e-10,7;UBERON:0005749,2.92e-10,7;UBERON:0004199,2.92e-10,7;UBERON:0004209,2.92e-10,7;UBERON:0004198,2.92e-10,7;UBERON:0005181,3.62e-10,35;UBERON:0008947,2.66e-09,38;UBERON:0003258,2.66e-09,38;UBERON:0005103,4.85e-09,8;UBERON:0000083,4.85e-09,8;UBERON:0009201,4.85e-09,8;UBERON:0006553,4.85e-09,8;UBERON:0003074,4.85e-09,8;UBERON:0003060,4.85e-09,8;UBERON:0001310,1.77e-08,4;UBERON:0000485,2.04e-08,9;UBERON:0000080,4.33e-08,9;UBERON:0002120,4.33e-08,9;UBERON:0004875,4.33e-08,9;UBERON:0005721,4.33e-08,9;UBERON:0005754,4.33e-08,9;UBERON:0007297,4.33e-08,9;UBERON:0000072,2.30e-07,47;UBERON:0001004,3.60e-07,74;UBERON:0004807,9.24e-07,28;UBERON:0004802,9.37e-07,19;UBERON:0000115,9.37e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,8.27479102031034,1.8072355126695,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.263504357079378,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0.835979866147242,0,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0,0.529636723252875,0.860509862246441,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0.469737994575059,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,1.15956511897978,0.545492241181669,0,0,0,0,0,0,0,0,0,2.76269842704961,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,2.24803506515239,1.10581869652794,0.925884451585296,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0.276242966807689,0.114814448164607,0.182091168006717,0,0,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,1.54227252690289,1.08378575017541,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0.495854746082934,0.384380134730212,0.255225424989168,0.4046311234222,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,1.01455188481352,1.54911749049875,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0.349934720244983,1.34710957815717,2.01090682660736,4.3556393944529,0,0.86101074534246,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81250867562184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,1.13176968554523,0,0.171986032471617,0,0.219267951258557,0.246346371159628,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,3.68978156359193,0,0,0,0.896436696664224,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.545545977607678,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0.521988583930423,0,0,1.46842022703881,0.537266523244462,0,0,0.176689145945881,0,0.337884881306145,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.979156554036111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,2.07377898544228,0,0,0.0852134047591577,0,0.22910686854405,0.62041277132864,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801652215796681,2.02168778976659,0,0,0,0,0,0,0.23806443146374,0,0,0.448527450322454,0,0,0,0,0,0,0,0.651226148887796,0.426909383510862,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,8.27479102031034,1.8072355126695,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.263504357079378,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,0,0.838998872419812,0.275118041940067,0.835979866147242,0,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0,0.529636723252875,0.860509862246441,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0.469737994575059,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,1.15956511897978,0.545492241181669,0,0,0,0,0,0,0,0,0,2.76269842704961,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,2.24803506515239,1.10581869652794,0.925884451585296,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,2.68367875415648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0.276242966807689,0.114814448164607,0.182091168006717,0,0,0.231046011313244,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0,1.54227252690289,1.08378575017541,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.178064071293475,0.495854746082934,0.384380134730212,0.255225424989168,0.4046311234222,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,1.01455188481352,1.54911749049875,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0.349934720244983,1.34710957815717,2.01090682660736,4.3556393944529,0,0.86101074534246,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81250867562184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,1.13176968554523,0,0.171986032471617,0,0.219267951258557,0.246346371159628,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,3.68978156359193,0,0,0,0.896436696664224,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.545545977607678,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0.521988583930423,0,0,1.46842022703881,0.537266523244462,0,0,0.176689145945881,0,0.337884881306145,0,0.345430341731199,0.607719912354764,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.979156554036111,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,2.07377898544228,0,0,0.0852134047591577,0,0.22910686854405,0.62041277132864,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801652215796681,2.02168778976659,0,0,0,0,0,0,0.23806443146374,0,0,0.448527450322454,0,0,0,0,0,0,0,0.651226148887796,0.426909383510862,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:82661826..82661829,- | |short_description=p@chr16:82661826..82661829,- | ||
}} | }} |
Latest revision as of 12:47, 25 July 2015
Short description: | p@chr16:82661826..82661829, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:82661826..82661829, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 6.65e-31 | 9 |
epithelial cell of lower respiratory tract | 6.65e-31 | 9 |
duct epithelial cell | 3.62e-24 | 3 |
branched duct epithelial cell | 3.62e-24 | 3 |
bronchial epithelial cell | 3.62e-24 | 3 |
tracheal epithelial cell | 3.62e-24 | 3 |
tracheoblast | 3.62e-24 | 3 |
respiratory epithelial cell | 2.83e-21 | 13 |
endo-epithelial cell | 1.06e-13 | 42 |
glomerular cell | 2.92e-10 | 7 |
kidney corpuscule cell | 2.92e-10 | 7 |
endodermal cell | 1.52e-09 | 58 |
epithelial cell | 1.39e-08 | 253 |
smooth muscle cell of the umbilical artery | 1.77e-08 | 4 |
keratinocyte | 4.43e-07 | 5 |
glomerular endothelial cell | 5.31e-07 | 5 |
epithelial cell of lung | 9.37e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.89e-09 | 1 |
keratoacanthoma | 1.89e-09 | 1 |
cervical cancer | 5.00e-07 | 5 |