FFCP PHASE1:Hg19::chr17:46675608..46675618,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3216 | |EntrezGene=3216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5117 | |HGNC=5117 | ||
|TSSclassifier=strong | |||
|UniProt=P17509 | |UniProt=P17509 | ||
|association_with_transcript=462bp_to_uc002int.1_5end | |association_with_transcript=462bp_to_uc002int.1_5end | ||
|cluster_id=chr17:46675608..46675618,- | |||
|description=CAGE_peak_10_at_HOXB6_5end | |description=CAGE_peak_10_at_HOXB6_5end | ||
|id=chr17:46675608..46675618,- | |id=chr17:46675608..46675618,- | ||
|ontology_enrichment_celltype=CL:1000449!3.15e-20!16;CL:0002681!4.02e-19!13;CL:0002584!4.02e-19!13;CL:1000497!2.11e-17!18;CL:0002518!2.11e-17!18;CL:1000507!1.01e-14!12;CL:1000494!1.01e-14!12;CL:1000612!3.44e-11!7;CL:1000746!3.44e-11!7;CL:0002078!9.47e-08!44;CL:0000666!3.47e-07!4;CL:0002188!3.47e-07!4;CL:0000066!6.77e-07!254 | |ontology_enrichment_celltype=CL:1000449!3.15e-20!16;CL:0002681!4.02e-19!13;CL:0002584!4.02e-19!13;CL:1000497!2.11e-17!18;CL:0002518!2.11e-17!18;CL:1000507!1.01e-14!12;CL:1000494!1.01e-14!12;CL:1000612!3.44e-11!7;CL:1000746!3.44e-11!7;CL:0002078!9.47e-08!44;CL:0000666!3.47e-07!4;CL:0002188!3.47e-07!4;CL:0000066!6.77e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:1000449;4.34e-24;15!CL:0002681;2.40e-22;12!CL:0002584;2.40e-22;12!CL:1000497;3.63e-21;17!CL:0002518;3.63e-21;17!CL:1000746;1.67e-17;7!CL:1000612;1.67e-17;7!CL:0002188;2.38e-14;5!CL:1000507;2.06e-12;10!CL:1000494;2.06e-12;10!CL:0000239;2.80e-11;3!CL:1000615;2.80e-11;3!CL:0002306;2.80e-11;3!CL:0002553;4.34e-09;1!CL:0000167;1.13e-08;1!CL:0000164;1.13e-08;1!CL:0000502;1.13e-08;1!CL:0000172;1.13e-08;1!CL:0000173;1.13e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,7.58e-24,15;CL:0002681,4.78e-22,12;CL:0002584,4.78e-22,12;CL:1000497,5.93e-21,17;CL:0002518,5.93e-21,17;CL:1000746,3.52e-17,7;CL:1000612,3.52e-17,7;CL:0002188,3.50e-14,5;CL:1000507,2.58e-12,10;CL:1000494,2.58e-12,10;CL:0000239,2.96e-11,3;CL:1000615,2.96e-11,3;CL:0002306,2.96e-11,3;CL:0002553,4.19e-09,1;CL:0000167,1.22e-08,1;CL:0000164,1.22e-08,1;CL:0000502,1.22e-08,1;CL:0000172,1.22e-08,1;CL:0000173,1.22e-08,1;CL:0002351,1.22e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.13e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;1.13e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.22e-08,1 | |||
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| ||
|short_description=p10@HOXB6 | |short_description=p10@HOXB6 | ||
}} | }} |
Latest revision as of 07:23, 25 September 2015
Short description: | p10@HOXB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HOXB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 462bp_to_uc002int.1_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | P17509 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 7.58e-24 | 15 |
kidney cortical cell | 4.78e-22 | 12 |
renal cortical epithelial cell | 4.78e-22 | 12 |
kidney cell | 5.93e-21 | 17 |
kidney epithelial cell | 5.93e-21 | 17 |
glomerular cell | 3.52e-17 | 7 |
kidney corpuscule cell | 3.52e-17 | 7 |
glomerular endothelial cell | 3.50e-14 | 5 |
kidney tubule cell | 2.58e-12 | 10 |
nephron tubule epithelial cell | 2.58e-12 | 10 |
brush border epithelial cell | 2.96e-11 | 3 |
kidney cortex tubule cell | 2.96e-11 | 3 |
epithelial cell of proximal tubule | 2.96e-11 | 3 |
lung fibroblast | 4.19e-09 | 1 |
peptide hormone secreting cell | 1.22e-08 | 1 |
enteroendocrine cell | 1.22e-08 | 1 |
type D enteroendocrine cell | 1.22e-08 | 1 |
somatostatin secreting cell | 1.22e-08 | 1 |
pancreatic D cell | 1.22e-08 | 1 |
progenitor cell of endocrine pancreas | 1.22e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.22e-08 | 1 |