FFCP PHASE1:Hg19::chr14:34124560..34124564,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:34124560..34124564,+
|short_description=p@chr14:34124560..34124564,+
|description=CAGE_peak_at_chr14:34124560..34124564,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:34124560..34124564,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr14:34124560..34124564,+ | |||
|id=chr14:34124560..34124564,+ | |||
|ontology_enrichment_celltype=CL:0002605!3.64e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;7.49e-43;3!CL:0000128;8.27e-19;7!CL:0000126;8.27e-19;7!CL:0000127;8.27e-19;7!CL:0002591;1.66e-15;1!CL:0002535;2.07e-08;2!CL:0000243;4.26e-08;15!CL:0000125;4.26e-08;15!CL:0000095;2.68e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.24e-42,3;CL:0000128,1.03e-18,7;CL:0000126,1.03e-18,7;CL:0000127,1.03e-18,7;CL:0002453,1.03e-18,7;CL:0002591,2.38e-15,1;CL:0002535,3.08e-08,2;CL:0000243,4.64e-08,15;CL:0000125,4.64e-08,15;CL:0000030,4.64e-08,15;CL:0000339,4.64e-08,15;CL:0000095,2.89e-07,17;CL:0000123,2.89e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.66e-15;1!CL:0000339;4.26e-08;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.97e-42!57;UBERON:0005068!3.97e-42!57;UBERON:0006241!3.97e-42!57;UBERON:0007135!3.97e-42!57;UBERON:0001017!3.69e-38!82;UBERON:0002346!3.82e-36!90;UBERON:0005743!8.04e-36!86;UBERON:0000073!4.86e-35!94;UBERON:0001016!4.86e-35!94;UBERON:0003075!1.29e-34!86;UBERON:0007284!1.29e-34!86;UBERON:0002020!2.78e-33!34;UBERON:0003528!2.78e-33!34;UBERON:0002616!3.54e-33!59;UBERON:0001893!1.00e-32!34;UBERON:0000955!3.56e-32!69;UBERON:0006238!3.56e-32!69;UBERON:0002791!2.44e-31!33;UBERON:0002780!5.61e-31!41;UBERON:0001890!5.61e-31!41;UBERON:0006240!5.61e-31!41;UBERON:0003080!4.61e-30!42;UBERON:0001869!3.87e-29!32;UBERON:0000956!3.58e-23!25;UBERON:0000203!3.58e-23!25;UBERON:0000924!2.30e-22!173;UBERON:0006601!2.30e-22!173;UBERON:0003056!1.54e-21!61;UBERON:0007023!3.56e-21!115;UBERON:0004121!4.89e-21!169;UBERON:0000033!7.04e-18!123;UBERON:0002619!1.10e-17!22;UBERON:0000153!1.12e-17!129;UBERON:0007811!1.12e-17!129;UBERON:0001950!3.04e-14!20;UBERON:0002298!2.32e-13!8;UBERON:0003076!6.03e-13!15;UBERON:0003057!6.03e-13!15;UBERON:0002420!5.85e-12!9;UBERON:0007245!5.85e-12!9;UBERON:0010009!5.85e-12!9;UBERON:0010011!5.85e-12!9;UBERON:0000454!5.85e-12!9;UBERON:0002308!1.31e-11!9;UBERON:0000125!1.31e-11!9;UBERON:0004732!6.13e-10!13;UBERON:0001871!7.17e-10!7;UBERON:0000025!5.92e-09!194;UBERON:0000483!1.27e-08!309;UBERON:0000119!2.07e-08!312;UBERON:0000064!2.46e-08!219;UBERON:0000349!2.92e-08!5;UBERON:0004733!3.16e-08!12;UBERON:0002028!3.16e-08!12;UBERON:0007277!3.16e-08!12;UBERON:0000200!3.21e-08!6;UBERON:0009663!5.89e-08!7;UBERON:0006331!8.42e-08!3;UBERON:0001896!9.00e-08!3;UBERON:0005290!9.00e-08!3;UBERON:0010096!9.00e-08!3;UBERON:0002240!2.68e-07!3;UBERON:0000988!3.39e-07!3;UBERON:0002771!3.62e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001876;1.33e-29;2!UBERON:0000349;2.79e-26;5!UBERON:0002791;8.00e-20;32!UBERON:0000956;2.07e-19;25!UBERON:0000203;2.07e-19;25!UBERON:0003528;1.80e-17;34!UBERON:0002020;1.80e-17;34!UBERON:0001893;4.50e-17;34!UBERON:0002038;1.66e-15;1!UBERON:0000941;1.66e-15;1!UBERON:0001785;1.66e-15;1!UBERON:0002464;1.66e-15;1!UBERON:0004904;1.66e-15;1!UBERON:0001021;1.66e-15;1!UBERON:0009661;1.66e-15;1!UBERON:0002950;1.66e-15;1!UBERON:0001891;1.66e-15;1!UBERON:0001869;2.08e-15;32!UBERON:0002420;6.52e-15;9!UBERON:0007245;6.52e-15;9!UBERON:0010009;6.52e-15;9!UBERON:0010011;6.52e-15;9!UBERON:0000454;6.52e-15;9!UBERON:0002780;8.26e-13;41!UBERON:0001890;8.26e-13;41!UBERON:0000073;1.59e-09;53!UBERON:0002616;1.59e-09;53!UBERON:0001871;3.65e-09;6!UBERON:0001954;2.07e-08;2!UBERON:0003714;2.07e-08;2!UBERON:0005162;2.07e-08;2!UBERON:0000122;2.07e-08;2!UBERON:0000078;2.07e-08;2!UBERON:0003022;2.07e-08;2!UBERON:0006955;2.07e-08;2!UBERON:0004801;2.07e-08;2!UBERON:0002012;2.07e-08;2!UBERON:0002421;2.07e-08;2!UBERON:0002600;2.07e-08;2!UBERON:0008886;2.07e-08;2!UBERON:0000955;2.68e-08;68!UBERON:0001016;6.86e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,9.31e-30,2;UBERON:0000349,1.53e-26,5;UBERON:0002791,1.29e-20,32;UBERON:0000956,1.85e-19,25;UBERON:0000203,1.85e-19,25;UBERON:0003528,2.06e-19,34;UBERON:0002020,2.06e-19,34;UBERON:0001893,2.06e-19,34;UBERON:0002780,4.16e-16,41;UBERON:0001890,4.16e-16,41;UBERON:0003080,4.16e-16,41;UBERON:0006240,4.16e-16,41;UBERON:0000941,9.99e-16,1;UBERON:0001785,9.99e-16,1;UBERON:0002464,9.99e-16,1;UBERON:0004904,9.99e-16,1;UBERON:0001021,9.99e-16,1;UBERON:0003902,9.99e-16,1;UBERON:0005425,9.99e-16,1;UBERON:0002038,1.78e-15,1;UBERON:0009661,1.78e-15,1;UBERON:0002950,1.78e-15,1;UBERON:0001891,1.78e-15,1;UBERON:0009616,1.78e-15,1;UBERON:0010286,1.78e-15,1;UBERON:0001869,2.74e-15,32;UBERON:0002420,5.94e-15,9;UBERON:0007245,5.94e-15,9;UBERON:0010009,5.94e-15,9;UBERON:0010011,5.94e-15,9;UBERON:0000454,5.94e-15,9;UBERON:0003056,5.24e-14,61;UBERON:0003075,5.36e-13,82;UBERON:0007284,5.36e-13,82;UBERON:0000073,2.01e-12,53;UBERON:0002616,2.01e-12,53;UBERON:0002346,2.33e-12,86;UBERON:0000955,2.43e-12,68;UBERON:0006238,2.43e-12,68;UBERON:0001049,9.61e-12,56;UBERON:0005068,9.61e-12,56;UBERON:0006241,9.61e-12,56;UBERON:0007135,9.61e-12,56;UBERON:0001016,1.10e-11,89;UBERON:0001017,2.70e-10,81;UBERON:0010371,4.39e-10,104;UBERON:0001871,3.30e-09,6;UBERON:0001954,1.50e-08,2;UBERON:0003022,1.50e-08,2;UBERON:0002421,1.50e-08,2;UBERON:0002600,1.50e-08,2;UBERON:0003714,1.61e-08,2;UBERON:0005162,1.61e-08,2;UBERON:0000122,1.61e-08,2;UBERON:0000078,2.48e-08,2;UBERON:0007497,2.48e-08,2;UBERON:0003643,2.48e-08,2;UBERON:0003504,2.48e-08,2;UBERON:0003469,2.48e-08,2;UBERON:0003496,2.48e-08,2;UBERON:0002012,2.48e-08,2;UBERON:0008886,2.48e-08,2;UBERON:0007303,2.48e-08,2;UBERON:0002061,2.48e-08,2;UBERON:0005432,2.48e-08,2;UBERON:0004363,2.48e-08,2;UBERON:0006955,3.08e-08,2;UBERON:0004801,3.08e-08,2;UBERON:0010314,9.24e-08,132;UBERON:0004121,4.01e-07,171;UBERON:0000924,4.01e-07,171;UBERON:0006601,4.01e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,1.23186982565596,1.12988375635323,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,2.98244294329889,1.26602474769461,0,0,10.9785212226557,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0.260427761085233,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.18608451472249,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,1.04135843001079,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0.514784993585894,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.775697738169303,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.610131324509816,0.1251909307065,0.573409195690071,0.887432412294818,0.620964029413834,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0.638535436228605,0,0.504143392443436,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.826747186004736,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0.111231401892069,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,1.14671666521161,0.315543124386369,0.339957450954573,0.872701380680755,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0.930896962757057,0,0.476128862927481,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,1.23186982565596,1.12988375635323,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,2.98244294329889,1.26602474769461,0,0,10.9785212226557,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0.260427761085233,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.18608451472249,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,1.04135843001079,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0.514784993585894,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.681017030557878,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.775697738169303,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.610131324509816,0.1251909307065,0.573409195690071,0.887432412294818,0.620964029413834,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0.638535436228605,0,0.504143392443436,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.826747186004736,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0.111231401892069,0.078493092850514,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,1.14671666521161,0.315543124386369,0.339957450954573,0.872701380680755,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0.930896962757057,0,0.476128862927481,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p@chr14:34124560..34124564,+ | |||
}} | }} |
Latest revision as of 20:14, 24 July 2015
Short description: | p@chr14:34124560..34124564, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:34124560..34124564, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.24e-42 | 3 |
oligodendrocyte | 1.03e-18 | 7 |
macroglial cell | 1.03e-18 | 7 |
astrocyte | 1.03e-18 | 7 |
oligodendrocyte precursor cell | 1.03e-18 | 7 |
smooth muscle cell of the pulmonary artery | 2.38e-15 | 1 |
epithelial cell of cervix | 3.08e-08 | 2 |
glial cell (sensu Vertebrata) | 4.64e-08 | 15 |
glial cell | 4.64e-08 | 15 |
glioblast | 4.64e-08 | 15 |
glioblast (sensu Vertebrata) | 4.64e-08 | 15 |
neuron associated cell | 2.89e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.89e-07 | 17 |