FFCP PHASE1:Hg19::chr16:82661826..82661829,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:82661826..82661829,-
|short_description=p@chr16:82661826..82661829,-
|description=CAGE_peak_at_chr16:82661826..82661829,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:82661826..82661829,- | |||
|description=CAGE_peak_at_chr16:82661826..82661829,- | |||
|id=chr16:82661826..82661829,- | |||
|ontology_enrichment_celltype=CL:0000066!2.22e-18!254;CL:0000220!1.11e-15!246;CL:0002321!2.25e-15!248;CL:0000076!9.36e-14!62;CL:0002076!8.99e-11!43;CL:0002368!1.14e-10!13;CL:0000071!5.85e-09!18;CL:0002546!5.85e-09!18;CL:1000413!1.40e-07!9;CL:0000548!1.66e-07!679;CL:0000004!1.66e-07!679;CL:0000255!1.66e-07!679;CL:0000012!2.57e-07!682;CL:0000222!2.99e-07!119;CL:0000213!5.08e-07!57;CL:0000215!5.08e-07!57;CL:0002139!5.95e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002202;8.78e-31;9!CL:0002632;8.78e-31;9!CL:0000307;2.96e-24;3!CL:0002328;6.74e-24;3!CL:0002368;3.43e-21;13!CL:1000746;2.49e-10;7!CL:1000612;2.49e-10;7!CL:0002594;1.57e-08;4!CL:0002076;2.24e-07;42!CL:0000312;3.85e-07;5!CL:0002188;5.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,6.65e-31,9;CL:0002632,6.65e-31,9;CL:0000068,3.62e-24,3;CL:0000069,3.62e-24,3;CL:0002328,3.62e-24,3;CL:0000307,3.62e-24,3;CL:0000377,3.62e-24,3;CL:0002368,2.83e-21,13;CL:0002076,1.06e-13,42;CL:1000746,2.92e-10,7;CL:1000612,2.92e-10,7;CL:0000223,1.52e-09,58;CL:0000066,1.39e-08,253;CL:0002594,1.77e-08,4;CL:0000312,4.43e-07,5;CL:0002188,5.31e-07,5;CL:0000082,9.37e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000377;2.96e-24;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.88e-09;1!DOID:3149;1.88e-09;1!DOID:4362;5.47e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.89e-09,1;DOID:3149,1.89e-09,1;DOID:4362,5.00e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001986!5.85e-09!18;UBERON:0004638!5.85e-09!18;UBERON:0004852!5.85e-09!18;UBERON:0001981!1.06e-08!60;UBERON:0007500!1.06e-08!60;UBERON:0004537!1.06e-08!60;UBERON:0006965!1.06e-08!60;UBERON:0000483!2.14e-08!309;UBERON:0001637!2.23e-08!42;UBERON:0003509!2.23e-08!42;UBERON:0004572!2.23e-08!42;UBERON:0003914!3.40e-08!118;UBERON:0000119!3.94e-08!312;UBERON:0004872!6.56e-08!84;UBERON:0003915!1.40e-07!9;UBERON:0004700!1.40e-07!9;UBERON:0001917!1.40e-07!9;UBERON:0000055!2.58e-07!69;UBERON:0002185!5.73e-07!4;UBERON:0002049!8.61e-07!79;UBERON:0007798!8.61e-07!79;UBERON:0000487!8.95e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.74e-24;3!UBERON:0002031;6.74e-24;3!UBERON:0007196;2.62e-18;15!UBERON:0001558;2.62e-18;15!UBERON:0002185;1.39e-14;5!UBERON:0003126;1.01e-10;7!UBERON:0001005;1.01e-10;7!UBERON:0000485;1.43e-10;7!UBERON:0000074;2.49e-10;7!UBERON:0001229;2.49e-10;7!UBERON:0005178;6.68e-10;34!UBERON:0002224;6.68e-10;34!UBERON:0005181;1.79e-09;35!UBERON:0000072;7.58e-09;37!UBERON:0004807;1.34e-08;22!UBERON:0001310;1.57e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.62e-24,3;UBERON:0002031,3.62e-24,3;UBERON:0007196,2.22e-18,15;UBERON:0001558,2.22e-18,15;UBERON:0002185,9.58e-15,5;UBERON:0003126,1.10e-10,7;UBERON:0001005,1.10e-10,7;UBERON:0005178,1.72e-10,34;UBERON:0002224,1.72e-10,34;UBERON:0010532,2.92e-10,7;UBERON:0000074,2.92e-10,7;UBERON:0001229,2.92e-10,7;UBERON:0001230,2.92e-10,7;UBERON:0003220,2.92e-10,7;UBERON:0005749,2.92e-10,7;UBERON:0004199,2.92e-10,7;UBERON:0004209,2.92e-10,7;UBERON:0004198,2.92e-10,7;UBERON:0005181,3.62e-10,35;UBERON:0008947,2.66e-09,38;UBERON:0003258,2.66e-09,38;UBERON:0005103,4.85e-09,8;UBERON:0000083,4.85e-09,8;UBERON:0009201,4.85e-09,8;UBERON:0006553,4.85e-09,8;UBERON:0003074,4.85e-09,8;UBERON:0003060,4.85e-09,8;UBERON:0001310,1.77e-08,4;UBERON:0000485,2.04e-08,9;UBERON:0000080,4.33e-08,9;UBERON:0002120,4.33e-08,9;UBERON:0004875,4.33e-08,9;UBERON:0005721,4.33e-08,9;UBERON:0005754,4.33e-08,9;UBERON:0007297,4.33e-08,9;UBERON:0000072,2.30e-07,47;UBERON:0001004,3.60e-07,74;UBERON:0004807,9.24e-07,28;UBERON:0004802,9.37e-07,19;UBERON:0000115,9.37e-07,19 | |||
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| ||
|short_description=p@chr16:82661826..82661829,- | |||
}} | }} |
Latest revision as of 12:47, 25 July 2015
Short description: | p@chr16:82661826..82661829, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:82661826..82661829, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 6.65e-31 | 9 |
epithelial cell of lower respiratory tract | 6.65e-31 | 9 |
duct epithelial cell | 3.62e-24 | 3 |
branched duct epithelial cell | 3.62e-24 | 3 |
bronchial epithelial cell | 3.62e-24 | 3 |
tracheal epithelial cell | 3.62e-24 | 3 |
tracheoblast | 3.62e-24 | 3 |
respiratory epithelial cell | 2.83e-21 | 13 |
endo-epithelial cell | 1.06e-13 | 42 |
glomerular cell | 2.92e-10 | 7 |
kidney corpuscule cell | 2.92e-10 | 7 |
endodermal cell | 1.52e-09 | 58 |
epithelial cell | 1.39e-08 | 253 |
smooth muscle cell of the umbilical artery | 1.77e-08 | 4 |
keratinocyte | 4.43e-07 | 5 |
glomerular endothelial cell | 5.31e-07 | 5 |
epithelial cell of lung | 9.37e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.89e-09 | 1 |
keratoacanthoma | 1.89e-09 | 1 |
cervical cancer | 5.00e-07 | 5 |