FFCP PHASE1:Hg19::chr17:46719983..46720028,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:46719983..46720028,+ | |||
|coexpression_cluster_id=C165 | |coexpression_cluster_id=C165 | ||
|description=CAGE_peak_at_chr17:46719983..46720028,+ | |description=CAGE_peak_at_chr17:46719983..46720028,+ | ||
|id=chr17:46719983..46720028,+ | |id=chr17:46719983..46720028,+ | ||
|ontology_enrichment_celltype=CL:1000507!3.43e-26!12;CL:1000494!3.43e-26!12;CL:1000449!1.02e-22!16;CL:1000497!7.44e-20!18;CL:0002518!7.44e-20!18;CL:0000136!2.79e-16!15;CL:0002681!1.35e-15!13;CL:0002584!1.35e-15!13;CL:0002334!2.02e-10!12;CL:0002579!1.34e-09!3;CL:0002615!2.33e-09!3;CL:0002580!7.50e-09!3;CL:0000650!1.01e-08!3;CL:1000618!1.01e-08!3;CL:1001318!1.01e-08!3;CL:0002173!1.01e-08!3;CL:1000500!1.01e-08!3;CL:0000239!1.31e-08!3;CL:1000615!1.31e-08!3;CL:0002306!1.31e-08!3;CL:0000325!3.25e-07!39 | |ontology_enrichment_celltype=CL:1000507!3.43e-26!12;CL:1000494!3.43e-26!12;CL:1000449!1.02e-22!16;CL:1000497!7.44e-20!18;CL:0002518!7.44e-20!18;CL:0000136!2.79e-16!15;CL:0002681!1.35e-15!13;CL:0002584!1.35e-15!13;CL:0002334!2.02e-10!12;CL:0002579!1.34e-09!3;CL:0002615!2.33e-09!3;CL:0002580!7.50e-09!3;CL:0000650!1.01e-08!3;CL:1000618!1.01e-08!3;CL:1001318!1.01e-08!3;CL:0002173!1.01e-08!3;CL:1000500!1.01e-08!3;CL:0000239!1.31e-08!3;CL:1000615!1.31e-08!3;CL:0002306!1.31e-08!3;CL:0000325!3.25e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:1000507;4.71e-36;10!CL:1000494;4.71e-36;10!CL:1000449;9.31e-30;15!CL:1000497;4.38e-26;17!CL:0002518;4.38e-26;17!CL:0002579;2.29e-18;3!CL:0002615;6.54e-18;3!CL:0002681;1.12e-16;12!CL:0002584;1.12e-16;12!CL:0000650;2.10e-12;2!CL:1000500;2.10e-12;2!CL:1000618;2.10e-12;2!CL:1001318;2.10e-12;2!CL:0002173;2.10e-12;2!CL:0002334;4.36e-08;12!CL:1000746;7.88e-08;7!CL:1000612;7.88e-08;7!CL:0000136;3.34e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.30e-36,10;CL:1000494,4.30e-36,10;CL:1000449,8.27e-30,15;CL:1000497,3.95e-26,17;CL:0002518,3.95e-26,17;CL:0002579,2.22e-18,3;CL:0002615,7.13e-18,3;CL:0002681,9.99e-17,12;CL:0002584,9.99e-17,12;CL:0000650,2.29e-12,2;CL:1000500,2.29e-12,2;CL:1000618,2.29e-12,2;CL:1001318,2.29e-12,2;CL:0002173,2.29e-12,2;CL:0000136,3.11e-09,15;CL:0002334,4.32e-08,12;CL:1000746,7.88e-08,7;CL:1000612,7.88e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.44e-07;1 | |||
|ontology_enrichment_disease=DOID:3350!6.87e-07!2 | |ontology_enrichment_disease=DOID:3350!6.87e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3350;8.74e-13;2!DOID:6193;1.46e-07;1!DOID:3111;4.31e-07;1!DOID:3603;4.31e-07;1!DOID:3571;6.68e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,1.01e-12,2;DOID:6193,1.46e-07,1;DOID:3111,4.31e-07,1;DOID:3603,4.31e-07,1;DOID:3571,7.73e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0009773!3.43e-26!12;UBERON:0001231!3.43e-26!12;UBERON:0004810!3.43e-26!12;UBERON:0006555!1.09e-24!17;UBERON:0005103!1.09e-24!17;UBERON:0000083!1.09e-24!17;UBERON:0009201!1.09e-24!17;UBERON:0004819!1.09e-24!17;UBERON:0006553!1.09e-24!17;UBERON:0003074!1.09e-24!17;UBERON:0003060!1.09e-24!17;UBERON:0000080!3.95e-23!18;UBERON:0002120!3.95e-23!18;UBERON:0004875!3.95e-23!18;UBERON:0005721!3.95e-23!18;UBERON:0005754!3.95e-23!18;UBERON:0007297!3.95e-23!18;UBERON:0004211!1.02e-22!16;UBERON:0001285!1.02e-22!16;UBERON:0007684!1.02e-22!16;UBERON:0003220!1.02e-22!16;UBERON:0004208!1.02e-22!16;UBERON:0003886!2.10e-22!63;UBERON:0004876!1.76e-20!20;UBERON:0002553!1.96e-19!70;UBERON:0003887!2.40e-19!21;UBERON:0003688!2.97e-17!6;UBERON:0002358!2.97e-17!6;UBERON:0003684!2.97e-17!6;UBERON:0001178!2.97e-17!6;UBERON:0002113!1.56e-16!27;UBERON:0003918!1.56e-16!27;UBERON:0005095!1.56e-16!27;UBERON:0007687!1.56e-16!27;UBERON:0002417!4.03e-16!61;UBERON:0000916!4.03e-16!61;UBERON:0001225!1.35e-15!13;UBERON:0008987!1.35e-15!13;UBERON:0000058!5.43e-15!26;UBERON:0000353!2.98e-14!17;UBERON:0000489!2.14e-13!32;UBERON:0000464!5.93e-13!104;UBERON:0009569!1.63e-12!113;UBERON:0001851!2.55e-12!16;UBERON:0006554!7.97e-12!44;UBERON:0001008!1.79e-11!45;UBERON:0000466!2.33e-11!126;UBERON:0003064!1.35e-09!37;UBERON:0000059!3.19e-09!11;UBERON:0003567!1.01e-08!3;UBERON:0003838!1.01e-08!3;UBERON:0005169!1.01e-08!3;UBERON:0002321!1.01e-08!3;UBERON:0005215!1.01e-08!3;UBERON:0002303!1.01e-08!3;UBERON:0002319!1.01e-08!3;UBERON:0005172!1.03e-08!55;UBERON:0005173!1.03e-08!55;UBERON:0006853!1.31e-08!3;UBERON:0007685!1.31e-08!3;UBERON:0004134!1.31e-08!3;UBERON:0004457!3.40e-08!12;UBERON:0000042!3.40e-08!12;UBERON:0002323!4.89e-07!46 | |ontology_enrichment_uberon=UBERON:0009773!3.43e-26!12;UBERON:0001231!3.43e-26!12;UBERON:0004810!3.43e-26!12;UBERON:0006555!1.09e-24!17;UBERON:0005103!1.09e-24!17;UBERON:0000083!1.09e-24!17;UBERON:0009201!1.09e-24!17;UBERON:0004819!1.09e-24!17;UBERON:0006553!1.09e-24!17;UBERON:0003074!1.09e-24!17;UBERON:0003060!1.09e-24!17;UBERON:0000080!3.95e-23!18;UBERON:0002120!3.95e-23!18;UBERON:0004875!3.95e-23!18;UBERON:0005721!3.95e-23!18;UBERON:0005754!3.95e-23!18;UBERON:0007297!3.95e-23!18;UBERON:0004211!1.02e-22!16;UBERON:0001285!1.02e-22!16;UBERON:0007684!1.02e-22!16;UBERON:0003220!1.02e-22!16;UBERON:0004208!1.02e-22!16;UBERON:0003886!2.10e-22!63;UBERON:0004876!1.76e-20!20;UBERON:0002553!1.96e-19!70;UBERON:0003887!2.40e-19!21;UBERON:0003688!2.97e-17!6;UBERON:0002358!2.97e-17!6;UBERON:0003684!2.97e-17!6;UBERON:0001178!2.97e-17!6;UBERON:0002113!1.56e-16!27;UBERON:0003918!1.56e-16!27;UBERON:0005095!1.56e-16!27;UBERON:0007687!1.56e-16!27;UBERON:0002417!4.03e-16!61;UBERON:0000916!4.03e-16!61;UBERON:0001225!1.35e-15!13;UBERON:0008987!1.35e-15!13;UBERON:0000058!5.43e-15!26;UBERON:0000353!2.98e-14!17;UBERON:0000489!2.14e-13!32;UBERON:0000464!5.93e-13!104;UBERON:0009569!1.63e-12!113;UBERON:0001851!2.55e-12!16;UBERON:0006554!7.97e-12!44;UBERON:0001008!1.79e-11!45;UBERON:0000466!2.33e-11!126;UBERON:0003064!1.35e-09!37;UBERON:0000059!3.19e-09!11;UBERON:0003567!1.01e-08!3;UBERON:0003838!1.01e-08!3;UBERON:0005169!1.01e-08!3;UBERON:0002321!1.01e-08!3;UBERON:0005215!1.01e-08!3;UBERON:0002303!1.01e-08!3;UBERON:0002319!1.01e-08!3;UBERON:0005172!1.03e-08!55;UBERON:0005173!1.03e-08!55;UBERON:0006853!1.31e-08!3;UBERON:0007685!1.31e-08!3;UBERON:0004134!1.31e-08!3;UBERON:0004457!3.40e-08!12;UBERON:0000042!3.40e-08!12;UBERON:0002323!4.89e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.71e-36;10!UBERON:0009773;4.71e-36;10!UBERON:0001231;4.71e-36;10!UBERON:0004810;4.71e-36;10!UBERON:0003688;1.76e-34;6!UBERON:0002358;1.76e-34;6!UBERON:0003684;1.76e-34;6!UBERON:0001178;1.76e-34;6!UBERON:0006555;9.31e-30;15!UBERON:0004819;9.31e-30;15!UBERON:0001285;9.31e-30;15!UBERON:0007684;9.31e-30;15!UBERON:0004457;7.83e-23;9!UBERON:0000042;7.83e-23;9!UBERON:0000059;5.74e-19;11!UBERON:0002113;4.80e-18;24!UBERON:0011143;4.80e-18;24!UBERON:0006554;2.30e-17;30!UBERON:0001008;2.30e-17;30!UBERON:0001225;1.12e-16;12!UBERON:0008987;1.12e-16;12!UBERON:0000489;1.12e-14;29!UBERON:0001851;3.08e-13;15!UBERON:0000353;3.08e-13;15!UBERON:0002417;1.10e-12;58!UBERON:0000916;1.10e-12;58!UBERON:0003567;2.10e-12;2!UBERON:0003838;2.10e-12;2!UBERON:0003586;2.10e-12;2!UBERON:0005169;2.10e-12;2!UBERON:0002321;2.10e-12;2!UBERON:0005215;2.10e-12;2!UBERON:0002303;2.10e-12;2!UBERON:0002319;2.10e-12;2!UBERON:0000160;2.27e-11;17!UBERON:0004907;3.43e-11;5!UBERON:0001155;7.05e-11;9!UBERON:0005409;9.08e-09;22!UBERON:0000074;7.88e-08;7!UBERON:0001229;7.88e-08;7!UBERON:0001154;2.44e-07;1!UBERON:0001153;2.44e-07;1!UBERON:0009854;2.44e-07;1!UBERON:0002323;5.38e-07;45!UBERON:0001052;9.34e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.30e-36,10;UBERON:0003688,1.87e-34,6;UBERON:0002358,1.87e-34,6;UBERON:0003684,1.87e-34,6;UBERON:0001178,1.87e-34,6;UBERON:0004211,8.27e-30,15;UBERON:0009773,8.27e-30,15;UBERON:0001231,8.27e-30,15;UBERON:0001285,8.27e-30,15;UBERON:0007684,8.27e-30,15;UBERON:0004208,8.27e-30,15;UBERON:0006555,7.44e-28,16;UBERON:0004819,7.44e-28,16;UBERON:0002417,3.19e-21,60;UBERON:0000916,3.19e-21,60;UBERON:0000059,5.06e-19,11;UBERON:0004457,5.53e-17,12;UBERON:0000042,5.53e-17,12;UBERON:0001225,9.99e-17,12;UBERON:0008987,9.99e-17,12;UBERON:0002113,1.43e-16,26;UBERON:0003918,1.43e-16,26;UBERON:0011143,1.43e-16,26;UBERON:0005095,1.43e-16,26;UBERON:0007687,1.43e-16,26;UBERON:0000489,1.17e-13,31;UBERON:0001851,2.82e-13,15;UBERON:0000353,2.82e-13,15;UBERON:0003886,7.71e-13,54;UBERON:0003567,2.29e-12,2;UBERON:0003838,2.29e-12,2;UBERON:0003586,2.29e-12,2;UBERON:0005169,2.29e-12,2;UBERON:0002321,2.29e-12,2;UBERON:0005215,2.29e-12,2;UBERON:0002303,2.29e-12,2;UBERON:0002319,2.29e-12,2;UBERON:0000160,2.11e-11,17;UBERON:0009569,2.65e-11,112;UBERON:0004907,3.09e-11,5;UBERON:0002553,4.21e-11,61;UBERON:0001155,6.78e-11,9;UBERON:0006554,1.83e-10,47;UBERON:0001008,3.29e-10,48;UBERON:0005172,6.81e-09,54;UBERON:0005173,6.81e-09,54;UBERON:0002323,1.33e-08,46;UBERON:0004458,5.50e-08,49;UBERON:0010532,7.88e-08,7;UBERON:0000074,7.88e-08,7;UBERON:0001229,7.88e-08,7;UBERON:0001230,7.88e-08,7;UBERON:0003220,7.88e-08,7;UBERON:0005749,7.88e-08,7;UBERON:0004199,7.88e-08,7;UBERON:0004209,7.88e-08,7;UBERON:0004198,7.88e-08,7;UBERON:0005409,1.04e-07,25;UBERON:0001154,2.37e-07,1;UBERON:0001153,2.37e-07,1;UBERON:0001045,2.37e-07,1;UBERON:0005103,6.63e-07,8;UBERON:0000083,6.63e-07,8;UBERON:0009201,6.63e-07,8;UBERON:0006553,6.63e-07,8;UBERON:0003074,6.63e-07,8;UBERON:0003060,6.63e-07,8;UBERON:0001052,8.70e-07,4 | |||
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| ||
|short_description=p@chr17:46719983..46720028,+ | |short_description=p@chr17:46719983..46720028,+ | ||
}} | }} |
Latest revision as of 18:13, 25 July 2015
Short description: | p@chr17:46719983..46720028, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46719983..46720028, + |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.30e-36 | 10 |
nephron tubule epithelial cell | 4.30e-36 | 10 |
epithelial cell of nephron | 8.27e-30 | 15 |
kidney cell | 3.95e-26 | 17 |
kidney epithelial cell | 3.95e-26 | 17 |
omentum preadipocyte | 2.22e-18 | 3 |
adipocyte of omentum tissue | 7.13e-18 | 3 |
kidney cortical cell | 9.99e-17 | 12 |
renal cortical epithelial cell | 9.99e-17 | 12 |
mesangial cell | 2.29e-12 | 2 |
kidney interstitial cell | 2.29e-12 | 2 |
juxtaglomerular complex cell | 2.29e-12 | 2 |
renal interstitial pericyte | 2.29e-12 | 2 |
extraglomerular mesangial cell | 2.29e-12 | 2 |
fat cell | 3.11e-09 | 15 |
preadipocyte | 4.32e-08 | 12 |
glomerular cell | 7.88e-08 | 7 |
kidney corpuscule cell | 7.88e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 1.01e-12 | 2 |
epithelioid sarcoma | 1.46e-07 | 1 |
cystadenocarcinoma | 4.31e-07 | 1 |
mucinous cystadenocarcinoma | 4.31e-07 | 1 |
liver cancer | 7.73e-07 | 1 |