FFCP PHASE1:Hg19::chr19:45226133..45226157,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:45226133..45226157,-
|short_description=p@chr19:45226133..45226157,-
|description=CAGE_peak_at_chr19:45226133..45226157,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:45226133..45226157,- | |||
|description=CAGE_peak_at_chr19:45226133..45226157,- | |||
|id=chr19:45226133..45226157,- | |||
|ontology_enrichment_celltype=CL:0002139!2.44e-62!24;CL:0000115!2.38e-57!35;CL:0002078!9.34e-51!44;CL:0000071!5.39e-45!18;CL:0002546!5.39e-45!18;CL:0000213!6.42e-43!57;CL:0000215!6.42e-43!57;CL:1000413!8.31e-20!9;CL:0005020!8.76e-19!6;CL:0002138!8.76e-19!6;CL:0005022!8.76e-19!6;CL:0002543!1.69e-18!6;CL:0000222!2.33e-17!119;CL:0000076!1.36e-15!62;CL:0002544!3.52e-12!6;CL:1000612!1.04e-10!7;CL:1000746!1.04e-10!7;CL:0002144!3.08e-10!3;CL:0002618!3.58e-10!3;CL:0000066!7.47e-10!254;CL:0000220!8.28e-09!246;CL:0002321!1.16e-08!248;CL:0000666!1.85e-07!4;CL:0002188!1.85e-07!4;CL:0002545!5.96e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.70e-86;24!CL:0000115;2.90e-66;36!CL:0000071;1.51e-47;18!CL:0002078;6.99e-47;45!CL:0002138;1.36e-44;6!CL:0002543;5.47e-31;6!CL:0000213;1.45e-29;58!CL:0000215;1.45e-29;58!CL:0002144;3.59e-23;3!CL:0002618;7.05e-23;3!CL:0002188;3.34e-14;5!CL:1000746;2.71e-10;7!CL:1000612;2.71e-10;7!CL:0000076;5.72e-09;63!CL:0002379;6.16e-09;1!CL:1000413;1.08e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.60e-87,36;CL:0002139,7.33e-86,24;CL:0002078,5.02e-69,45;CL:0000213,9.54e-53,58;CL:0000215,9.54e-53,58;CL:0000071,1.44e-47,18;CL:0002546,1.44e-47,18;CL:0005020,1.36e-44,6;CL:0002138,1.36e-44,6;CL:0005022,1.36e-44,6;CL:0002543,4.54e-31,6;CL:0000222,2.39e-23,121;CL:0002144,3.59e-23,3;CL:0002618,5.23e-23,3;CL:0002188,3.50e-14,5;CL:0000076,2.87e-12,63;CL:0002321,1.43e-11,250;CL:0000066,1.65e-11,253;CL:1000746,2.80e-10,7;CL:1000612,2.80e-10,7;CL:0002379,7.18e-09,1;CL:1000413,1.13e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.51e-47;18!CL:0005022;1.36e-44;6!CL:0000222;2.09e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;6.16e-09;1!DOID:3565;6.16e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,7.18e-09,1;DOID:3565,7.18e-09,1 | |||
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| ||
|short_description=p@chr19:45226133..45226157,- | |||
}} | }} |
Latest revision as of 14:41, 27 July 2015
Short description: | p@chr19:45226133..45226157, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45226133..45226157, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.60e-87 | 36 |
endothelial cell of vascular tree | 7.33e-86 | 24 |
meso-epithelial cell | 5.02e-69 | 45 |
lining cell | 9.54e-53 | 58 |
barrier cell | 9.54e-53 | 58 |
blood vessel endothelial cell | 1.44e-47 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.44e-47 | 18 |
lymphangioblast | 1.36e-44 | 6 |
endothelial cell of lymphatic vessel | 1.36e-44 | 6 |
vascular lymphangioblast | 1.36e-44 | 6 |
vein endothelial cell | 4.54e-31 | 6 |
mesodermal cell | 2.39e-23 | 121 |
capillary endothelial cell | 3.59e-23 | 3 |
endothelial cell of umbilical vein | 5.23e-23 | 3 |
glomerular endothelial cell | 3.50e-14 | 5 |
squamous epithelial cell | 2.87e-12 | 63 |
embryonic cell | 1.43e-11 | 250 |
epithelial cell | 1.65e-11 | 253 |
glomerular cell | 2.80e-10 | 7 |
kidney corpuscule cell | 2.80e-10 | 7 |
meningothelial cell | 7.18e-09 | 1 |
endothelial cell of artery | 1.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 7.18e-09 | 1 |
meningioma | 7.18e-09 | 1 |