FF:11242-116D9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468 | |DRA_sample_Accession=CAGE@SAMD00005104 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00005104 | ||
|accession_numbers=CAGE;DRX008206;DRR009078;DRZ000503;DRZ001888;DRZ011853;DRZ013238 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037227;DRR041593;DRZ007235 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000970,UBERON:0000019,UBERON:0000483,UBERON:0000033,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000047,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000020,UBERON:0010371,UBERON:0002203,UBERON:0001768,UBERON:0000488,UBERON:0007625,UBERON:0001032,UBERON:0002049,UBERON:0002200,UBERON:0006876,UBERON:0010317,UBERON:0007798,UBERON:0001778,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0004535,UBERON:0002104,UBERON:0001801,UBERON:0004456,UBERON:0001456,UBERON:0001775,UBERON:0010230,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000064,CL:0000075,CL:0000066,CL:0002371,CL:0000710,CL:0000255,CL:0002077,CL:0000067,CL:0005012,CL:0002304 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000040 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr6:45296048..45296082,+!p1@RUNX2!1.94!97.47!RUNX2;;chr11:31839488..31839515,-!p3@PAX6!1.91!79.79!PAX6;;chr11:31832658..31832681,-!p1@PAX6!1.73!52.09!PAX6;;chr13:72441315..72441454,-!p1@DACH1!1.71!96.99!DACH1;;chr1:197886461..197886558,+!p1@LHX9!1.68!46.70!LHX9;;chr3:147127142..147127168,+!p1@ZIC1!1.63!41.22!ZIC1;;chr3:147127177..147127194,+!p2@ZIC1!1.58!37.34!ZIC1;;chr2:45168875..45168916,+!p1@SIX3!1.57!36.11!SIX3;;chr9:77112244..77112262,+!p1@RORB!1.55!38.19!RORB;;chr2:45169193..45169219,+!p3@SIX3!1.54!33.65!SIX3;;chr5:92918919..92918942,+!p1@NR2F1!1.52!136.79!NR2F1;;chr2:45168834..45168847,+!p2@SIX3!1.50!30.72!SIX3;;chr3:181429704..181429722,+!p1@SOX2!1.49!29.87!SOX2;;chrX:139587228..139587234,-!p1@SOX3!1.46!27.89!SOX3;;chr14:60975883..60975911,+!p1@SIX6!1.45!27.32!SIX6;;chr7:35293685..35293718,-!p1@TBX20!1.40!24.11!TBX20;;chr14:29235961..29236008,+!p1@FOXG1!1.40!24.01!FOXG1;;chr4:8873545..8873583,-!p1@HMX1!1.37!22.22!HMX1;;chr2:63277948..63277974,+!p1@OTX1!1.37!22.22!OTX1;;chr9:126774018..126774055,+!p1@LHX2!1.35!21.18!LHX2;;chr12:66218255..66218304,+!p3@HMGA2!1.31!51.62!HMGA2;;chr3:25470156..25470227,+!p2@RARB!1.28!17.96!RARB;;chr13:72441074..72441172,-!p2@DACH1!1.27!17.58!DACH1;;chr14:60975858..60975869,+!p2@SIX6!1.26!17.39!SIX6;;chr12:66218183..66218209,+!p4@HMGA2!1.25!31.76!HMGA2;;chr3:170076314..170076334,+!p2@SKIL!1.25!21.65!SKIL;;chrX:136648279..136648295,+!p1@ZIC3!1.25!16.64!ZIC3;;chr12:66218598..66218645,+!p2@HMGA2!1.22!70.43!HMGA2;;chr12:66218212..66218244,+!p5@HMGA2!1.22!22.50!HMGA2;;chr11:31832610..31832639,-!p5@PAX6!1.21!15.22!PAX6;;chr14:29234581..29234601,+!p2@FOXG1!1.20!14.84!FOXG1;;chr13:100634031..100634045,+!p1@ZIC2!1.20!14.75!ZIC2;;chr18:56940611..56940660,-!p1@RAX!1.19!14.65!RAX;;chr20:30433396..30433414,-!p1@FOXS1!1.18!14.27!FOXS1;;chr3:147111231..147111281,+!p3@ZIC1!1.17!13.90!ZIC1;;chr3:147139053..147139112,+!p5@ZIC1!1.17!13.90!ZIC1;;chr3:147124307..147124336,-!p2@ZIC4!1.17!13.80!ZIC4;;chr5:92919100..92919135,+!p3@NR2F1!1.15!15.79!NR2F1;;chr11:31832862..31832884,-!p2@PAX6!1.12!12.10!PAX6;;chr2:45169143..45169167,+!p5@SIX3!1.12!12.10!SIX3;;chr13:45010939..45011033,-!p1@TSC22D1!1.10!768.57!TSC22D1;;chr5:92918956..92918969,+!p4@NR2F1!1.10!12.57!NR2F1;;chr16:86600426..86600441,+!p1@FOXC2!1.07!26.66!FOXC2;;chr13:100623375..100623425,-!p1@ZIC5!1.07!10.87!ZIC5;;chr2:63277978..63277995,+!p2@OTX1!1.07!10.87!OTX1;;chr2:45169233..45169244,+!p10@SIX3!1.07!10.78!SIX3;;chr2:5832508..5832524,+!p1@SOX11!1.07!10.68!SOX11;;chr14:29236269..29236285,+!p3@FOXG1!1.06!10.59!FOXG1;;chr5:124082322..124082364,-!p1@ZNF608!1.05!26.66!ZNF608;;chr5:92918768..92918783,+!p8@NR2F1!1.05!10.30!NR2F1;;chr3:181429741..181429767,+!p2@SOX2!1.05!10.12!SOX2;;chr10:64576105..64576133,-!p1@EGR2!1.04!20.70!EGR2;;chr3:169381420..169381535,-!p1@MECOM!1.03!11.53!MECOM;;chr11:31832807..31832823,-!p4@PAX6!1.03!9.83!PAX6;;chrX:136648643..136648711,+!p2@ZIC3!1.03!9.64!ZIC3;;chr2:71127699..71127744,+!p1@VAX2!1.02!19.95!VAX2;;chr3:168865144..168865160,-!p6@MECOM!1.02!9.55!MECOM;;chr11:31832581..31832601,-!p7@PAX6!1.01!9.26!PAX6;;chr3:25469724..25469773,+!p1@RARB!1.00!13.05!RARB;;chr14:60975644..60975673,+!p3@SIX6!1.00!8.89!SIX6;;chr3:71630980..71631110,-!p3@FOXP1!0.99!31.48!FOXP1;;chr10:48355030..48355090,+!p1@ZNF488!0.98!11.25!ZNF488;;chr11:31827535..31827565,-!p11@PAX6!0.98!8.51!PAX6;;chr1:23696348..23696363,-!p4@ZNF436!0.97!9.36!ZNF436;;chr5:92918894..92918912,+!p2@NR2F1!0.96!27.60!NR2F1;;chr12:24715376..24715432,-!p1@SOX5!0.96!10.30!SOX5;;chr2:45169179..45169190,+!p8@SIX3!0.96!8.22!SIX3;;chr5:92918860..92918871,+!p10@NR2F1!0.95!8.79!NR2F1;;chr9:16705069..16705086,-!p3@BNC2!0.95!7.94!BNC2;;chr8:60031619..60031676,-!p1@TOX!0.94!17.02!TOX;;chr5:92919068..92919082,+!p5@NR2F1!0.94!9.17!NR2F1;;chr3:21792682..21792720,-!p1@ZNF385D!0.94!7.75!ZNF385D;;chr14:73360799..73360817,-!p1@DPF3!0.93!27.23!DPF3;;chr3:147127489..147127503,+!p11@ZIC1!0.93!7.56!ZIC1;;chr2:66662281..66662308,+!p1@MEIS1!0.92!26.09!MEIS1;;chr1:23696308..23696339,-!p2@ZNF436!0.91!15.79!ZNF436;;chr1:164528616..164528660,+!p5@PBX1!0.91!14.94!PBX1;;chr2:166326200..166326216,+!p1@CSRNP3!0.91!10.59!CSRNP3;;chr16:86544113..86544145,+!p1@FOXF1!0.91!8.89!FOXF1;;chr2:45168856..45168867,+!p7@SIX3!0.90!7.00!SIX3;;chr13:100638100..100638115,+!p4@ZIC2!0.90!6.90!ZIC2;;chr16:79634624..79634642,-!p1@MAF!0.89!27.89!MAF;;chr5:124082279..124082319,-!p3@ZNF608!0.89!8.41!ZNF608;;chr8:60031682..60031710,-!p2@TOX!0.88!10.97!TOX;;chr2:25475120..25475176,-!p2@DNMT3A!0.87!8.79!DNMT3A;;chr1:23696448..23696453,-!p5@ZNF436!0.86!7.85!ZNF436;;chr14:21994337..21994442,-!p1@SALL2!0.85!17.68!SALL2;;chrX:84498989..84499003,+!p1@ZNF711!0.85!8.41!ZNF711;;chr8:77593474..77593612,+!p1@ZFHX4!0.84!26.75!ZFHX4;;chr12:66218573..66218596,+!p7@HMGA2!0.84!8.98!HMGA2;;chr11:31825588..31825613,-!p8@PAX6!0.84!5.96!PAX6;;chr9:4300050..4300118,-!p1@GLIS3!0.83!40.56!GLIS3;;chr12:26277817..26277863,-!p2@BHLHE41!0.83!8.04!BHLHE41;;chr1:151032922..151032951,+!p2@MLLT11!0.82!9.74!MLLT11;;chr3:21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| |expression_enrichment_score=chr6:45296048..45296082,+!p1@RUNX2!1.94!97.47!RUNX2;;chr11:31839488..31839515,-!p3@PAX6!1.91!79.79!PAX6;;chr11:31832658..31832681,-!p1@PAX6!1.73!52.09!PAX6;;chr13:72441315..72441454,-!p1@DACH1!1.71!96.99!DACH1;;chr1:197886461..197886558,+!p1@LHX9!1.68!46.70!LHX9;;chr3:147127142..147127168,+!p1@ZIC1!1.63!41.22!ZIC1;;chr3:147127177..147127194,+!p2@ZIC1!1.58!37.34!ZIC1;;chr2:45168875..45168916,+!p1@SIX3!1.57!36.11!SIX3;;chr9:77112244..77112262,+!p1@RORB!1.55!38.19!RORB;;chr2:45169193..45169219,+!p3@SIX3!1.54!33.65!SIX3;;chr5:92918919..92918942,+!p1@NR2F1!1.52!136.79!NR2F1;;chr2:45168834..45168847,+!p2@SIX3!1.50!30.72!SIX3;;chr3:181429704..181429722,+!p1@SOX2!1.49!29.87!SOX2;;chrX:139587228..139587234,-!p1@SOX3!1.46!27.89!SOX3;;chr14:60975883..60975911,+!p1@SIX6!1.45!27.32!SIX6;;chr7:35293685..35293718,-!p1@TBX20!1.40!24.11!TBX20;;chr14:29235961..29236008,+!p1@FOXG1!1.40!24.01!FOXG1;;chr4:8873545..8873583,-!p1@HMX1!1.37!22.22!HMX1;;chr2:63277948..63277974,+!p1@OTX1!1.37!22.22!OTX1;;chr9:126774018..126774055,+!p1@LHX2!1.35!21.18!LHX2;;chr12:66218255..66218304,+!p3@HMGA2!1.31!51.62!HMGA2;;chr3:25470156..25470227,+!p2@RARB!1.28!17.96!RARB;;chr13:72441074..72441172,-!p2@DACH1!1.27!17.58!DACH1;;chr14:60975858..60975869,+!p2@SIX6!1.26!17.39!SIX6;;chr12:66218183..66218209,+!p4@HMGA2!1.25!31.76!HMGA2;;chr3:170076314..170076334,+!p2@SKIL!1.25!21.65!SKIL;;chrX:136648279..136648295,+!p1@ZIC3!1.25!16.64!ZIC3;;chr12:66218598..66218645,+!p2@HMGA2!1.22!70.43!HMGA2;;chr12:66218212..66218244,+!p5@HMGA2!1.22!22.50!HMGA2;;chr11:31832610..31832639,-!p5@PAX6!1.21!15.22!PAX6;;chr14:29234581..29234601,+!p2@FOXG1!1.20!14.84!FOXG1;;chr13:100634031..100634045,+!p1@ZIC2!1.20!14.75!ZIC2;;chr18:56940611..56940660,-!p1@RAX!1.19!14.65!RAX;;chr20:30433396..30433414,-!p1@FOXS1!1.18!14.27!FOXS1;;chr3:147111231..147111281,+!p3@ZIC1!1.17!13.90!ZIC1;;chr3:147139053..147139112,+!p5@ZIC1!1.17!13.90!ZIC1;;chr3:147124307..147124336,-!p2@ZIC4!1.17!13.80!ZIC4;;chr5:92919100..92919135,+!p3@NR2F1!1.15!15.79!NR2F1;;chr11:31832862..31832884,-!p2@PAX6!1.12!12.10!PAX6;;chr2:45169143..45169167,+!p5@SIX3!1.12!12.10!SIX3;;chr13:45010939..45011033,-!p1@TSC22D1!1.10!768.57!TSC22D1;;chr5:92918956..92918969,+!p4@NR2F1!1.10!12.57!NR2F1;;chr16:86600426..86600441,+!p1@FOXC2!1.07!26.66!FOXC2;;chr13:100623375..100623425,-!p1@ZIC5!1.07!10.87!ZIC5;;chr2:63277978..63277995,+!p2@OTX1!1.07!10.87!OTX1;;chr2:45169233..45169244,+!p10@SIX3!1.07!10.78!SIX3;;chr2:5832508..5832524,+!p1@SOX11!1.07!10.68!SOX11;;chr14:29236269..29236285,+!p3@FOXG1!1.06!10.59!FOXG1;;chr5:124082322..124082364,-!p1@ZNF608!1.05!26.66!ZNF608;;chr5:92918768..92918783,+!p8@NR2F1!1.05!10.30!NR2F1;;chr3:181429741..181429767,+!p2@SOX2!1.05!10.12!SOX2;;chr10:64576105..64576133,-!p1@EGR2!1.04!20.70!EGR2;;chr3:169381420..169381535,-!p1@MECOM!1.03!11.53!MECOM;;chr11:31832807..31832823,-!p4@PAX6!1.03!9.83!PAX6;;chrX:136648643..136648711,+!p2@ZIC3!1.03!9.64!ZIC3;;chr2:71127699..71127744,+!p1@VAX2!1.02!19.95!VAX2;;chr3:168865144..168865160,-!p6@MECOM!1.02!9.55!MECOM;;chr11:31832581..31832601,-!p7@PAX6!1.01!9.26!PAX6;;chr3:25469724..25469773,+!p1@RARB!1.00!13.05!RARB;;chr14:60975644..60975673,+!p3@SIX6!1.00!8.89!SIX6;;chr3:71630980..71631110,-!p3@FOXP1!0.99!31.48!FOXP1;;chr10:48355030..48355090,+!p1@ZNF488!0.98!11.25!ZNF488;;chr11:31827535..31827565,-!p11@PAX6!0.98!8.51!PAX6;;chr1:23696348..23696363,-!p4@ZNF436!0.97!9.36!ZNF436;;chr5:92918894..92918912,+!p2@NR2F1!0.96!27.60!NR2F1;;chr12:24715376..24715432,-!p1@SOX5!0.96!10.30!SOX5;;chr2:45169179..45169190,+!p8@SIX3!0.96!8.22!SIX3;;chr5:92918860..92918871,+!p10@NR2F1!0.95!8.79!NR2F1;;chr9:16705069..16705086,-!p3@BNC2!0.95!7.94!BNC2;;chr8:60031619..60031676,-!p1@TOX!0.94!17.02!TOX;;chr5:92919068..92919082,+!p5@NR2F1!0.94!9.17!NR2F1;;chr3:21792682..21792720,-!p1@ZNF385D!0.94!7.75!ZNF385D;;chr14:73360799..73360817,-!p1@DPF3!0.93!27.23!DPF3;;chr3:147127489..147127503,+!p11@ZIC1!0.93!7.56!ZIC1;;chr2:66662281..66662308,+!p1@MEIS1!0.92!26.09!MEIS1;;chr1:23696308..23696339,-!p2@ZNF436!0.91!15.79!ZNF436;;chr1:164528616..164528660,+!p5@PBX1!0.91!14.94!PBX1;;chr2:166326200..166326216,+!p1@CSRNP3!0.91!10.59!CSRNP3;;chr16:86544113..86544145,+!p1@FOXF1!0.91!8.89!FOXF1;;chr2:45168856..45168867,+!p7@SIX3!0.90!7.00!SIX3;;chr13:100638100..100638115,+!p4@ZIC2!0.90!6.90!ZIC2;;chr16:79634624..79634642,-!p1@MAF!0.89!27.89!MAF;;chr5:124082279..124082319,-!p3@ZNF608!0.89!8.41!ZNF608;;chr8:60031682..60031710,-!p2@TOX!0.88!10.97!TOX;;chr2:25475120..25475176,-!p2@DNMT3A!0.87!8.79!DNMT3A;;chr1:23696448..23696453,-!p5@ZNF436!0.86!7.85!ZNF436;;chr14:21994337..21994442,-!p1@SALL2!0.85!17.68!SALL2;;chrX:84498989..84499003,+!p1@ZNF711!0.85!8.41!ZNF711;;chr8:77593474..77593612,+!p1@ZFHX4!0.84!26.75!ZFHX4;;chr12:66218573..66218596,+!p7@HMGA2!0.84!8.98!HMGA2;;chr11:31825588..31825613,-!p8@PAX6!0.84!5.96!PAX6;;chr9:4300050..4300118,-!p1@GLIS3!0.83!40.56!GLIS3;;chr12:26277817..26277863,-!p2@BHLHE41!0.83!8.04!BHLHE41;;chr1:151032922..151032951,+!p2@MLLT11!0.82!9.74!MLLT11;;chr3:21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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000067;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000710;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002077;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000970;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001768;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001801;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0007625 | |||
|ffid_belonging_in_development=CL:0000133,CL:0000221 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Ciliary%2520Epithelial%2520Cells%252c%2520donor1.CNhs10871.11242-116D9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Ciliary%2520Epithelial%2520Cells%252c%2520donor1.CNhs10871.11242-116D9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Ciliary%2520Epithelial%2520Cells%252c%2520donor1.CNhs10871.11242-116D9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Ciliary%2520Epithelial%2520Cells%252c%2520donor1.CNhs10871.11242-116D9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Ciliary%2520Epithelial%2520Cells%252c%2520donor1.CNhs10871.11242-116D9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11242-116D9 | |id=FF:11242-116D9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000040 | ||
|is_obsolete= | |||
|library_id=CNhs10871 | |||
|library_id_phase_based=2:CNhs10871 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11242 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10014.TTAGGC.11242 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11242 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10014.TTAGGC.11242 | |||
|name=Ciliary Epithelial Cells, donor1 | |name=Ciliary Epithelial Cells, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10871,LSID703,release008,COMPLETED | |profile_hcage=CNhs10871,LSID703,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10014,,, | |profile_srnaseq=SRhi10014,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.054215607271545,0,0,0,0,-0.0851107415577429,0,-0.0781385882444974,-0.262788770059079,0,0,0,0,0,0,0,0,0,0,0,0.0392295810357272,0,0.0147836343958349,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0.0752072885286432,0,-0.0416443759772938,0,0,0,0,0,0,0,0,-0.00460023059497074,0,0.014655829224459,0,0.0752072885286432,0,0.0334650442190693,0,-0.0969923612426051,0,0,0.0707630175311655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00590372123104099,0.00565729734297682,0.0738303977894086,0,0.0752072885286432,0.0116610171164913,0,0.0229058522882939,0.139293107667917,0.0738303977894086,0,0,0.054798757353295,0.0344844110447605,0,0.220564046218546,0.0196147905178636,0.10843121454309,0.12252869498084,-0.118862410283032,0,0,0.0196147905178636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0391551591402759,0,0,0,0,0.0258129529917405,0.0392295810357272,0,-1.61454777879433e-05,0,0,0 | |||
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| |||
|rna_box=116 | |rna_box=116 | ||
|rna_catalog_number=SC6585 | |rna_catalog_number=SC6585 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=116D9 | |rna_tube_id=116D9 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10014.TTAGGC | |||
|sample_age=fetal | |sample_age=fetal | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=unknown | |sample_ethnicity=unknown | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.8076842619682e-262!GO:0043226;organelle;8.65511321203874e-207!GO:0043229;intracellular organelle;1.53830286869732e-206!GO:0043231;intracellular membrane-bound organelle;3.95377197239328e-201!GO:0043227;membrane-bound organelle;6.57217034546898e-201!GO:0005737;cytoplasm;7.24006800932847e-192!GO:0044422;organelle part;8.07423161138463e-149!GO:0044446;intracellular organelle part;2.65145458624529e-147!GO:0044444;cytoplasmic part;3.48758243088037e-119!GO:0032991;macromolecular complex;3.04443431152545e-102!GO:0005634;nucleus;1.03668700607554e-91!GO:0044237;cellular metabolic process;4.18882557604237e-88!GO:0044238;primary metabolic process;1.95395755208303e-87!GO:0030529;ribonucleoprotein complex;7.49834432350725e-86!GO:0005515;protein binding;1.64739128467464e-82!GO:0043170;macromolecule metabolic process;4.60171043040284e-80!GO:0044428;nuclear part;1.9088434811566e-78!GO:0043233;organelle lumen;7.67191405052848e-73!GO:0031974;membrane-enclosed lumen;7.67191405052848e-73!GO:0003723;RNA binding;3.01366505176126e-72!GO:0016043;cellular component organization and biogenesis;3.3899507821937e-61!GO:0005739;mitochondrion;3.99439293065442e-60!GO:0043234;protein complex;4.28825858663319e-52!GO:0043283;biopolymer metabolic process;4.92283883905455e-51!GO:0005840;ribosome;1.88108071195922e-50!GO:0006396;RNA processing;4.67694908260311e-48!GO:0033036;macromolecule localization;2.71228305281741e-47!GO:0015031;protein transport;3.36819755266271e-46!GO:0031090;organelle membrane;1.61517827042533e-45!GO:0031981;nuclear lumen;1.64728343580606e-45!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.29891609363682e-44!GO:0006412;translation;1.67798633423918e-44!GO:0003735;structural constituent of ribosome;5.68910080962809e-44!GO:0019538;protein metabolic process;9.76746061382861e-44!GO:0010467;gene expression;1.18770139943956e-43!GO:0008104;protein localization;5.4172300681869e-43!GO:0043228;non-membrane-bound organelle;1.385296481133e-42!GO:0043232;intracellular non-membrane-bound organelle;1.385296481133e-42!GO:0045184;establishment of protein localization;2.15522634763024e-42!GO:0006996;organelle organization and biogenesis;3.73233684235769e-41!GO:0016071;mRNA metabolic process;1.01344375082963e-40!GO:0044429;mitochondrial part;2.14485033738967e-40!GO:0046907;intracellular transport;6.65482044023511e-40!GO:0031967;organelle envelope;1.00454005284336e-39!GO:0031975;envelope;1.66805616002892e-39!GO:0044260;cellular macromolecule metabolic process;1.81158005686163e-38!GO:0033279;ribosomal subunit;2.42547119038251e-38!GO:0044267;cellular protein metabolic process;2.95013324863092e-38!GO:0008380;RNA splicing;4.2798969943817e-38!GO:0009058;biosynthetic process;1.45185623132223e-37!GO:0005829;cytosol;4.55481792944066e-36!GO:0044249;cellular biosynthetic process;6.6783261614623e-36!GO:0006259;DNA metabolic process;8.25619154198335e-36!GO:0065003;macromolecular complex assembly;7.6173301901564e-35!GO:0006397;mRNA processing;1.03327836841923e-34!GO:0006886;intracellular protein transport;7.70768267853425e-33!GO:0009059;macromolecule biosynthetic process;7.70768267853425e-33!GO:0022607;cellular component assembly;8.39869618248195e-31!GO:0007049;cell cycle;1.08316072282279e-30!GO:0005654;nucleoplasm;2.42073302653264e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.21998150706622e-28!GO:0003676;nucleic acid binding;1.07189145113291e-27!GO:0005681;spliceosome;1.15431767481046e-26!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.05924928597666e-26!GO:0051641;cellular localization;9.091736126899e-26!GO:0051649;establishment of cellular localization;9.18343141603908e-26!GO:0005740;mitochondrial envelope;1.78451307634214e-25!GO:0019866;organelle inner membrane;4.21069286048428e-25!GO:0000166;nucleotide binding;5.10124255111549e-25!GO:0031966;mitochondrial membrane;3.27546039315044e-24!GO:0044451;nucleoplasm part;8.39997489309883e-24!GO:0022402;cell cycle process;1.80428710586562e-23!GO:0000278;mitotic cell cycle;2.35567829227695e-23!GO:0005743;mitochondrial inner membrane;5.44341365132138e-23!GO:0044445;cytosolic part;3.29157192297987e-22!GO:0006119;oxidative phosphorylation;9.45505746475883e-22!GO:0005694;chromosome;1.92177565325459e-20!GO:0016070;RNA metabolic process;3.76378432760673e-20!GO:0016462;pyrophosphatase activity;6.04018282069956e-20!GO:0015934;large ribosomal subunit;7.3793130468399e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.53262518938559e-20!GO:0012505;endomembrane system;1.05314786370702e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;1.16733977005503e-19!GO:0015935;small ribosomal subunit;1.97266360999683e-19!GO:0044427;chromosomal part;2.64223091421385e-19!GO:0006974;response to DNA damage stimulus;2.91005574227964e-19!GO:0051276;chromosome organization and biogenesis;3.49563430193552e-19!GO:0017111;nucleoside-triphosphatase activity;4.01392657142306e-19!GO:0044455;mitochondrial membrane part;5.71591350921496e-19!GO:0000087;M phase of mitotic cell cycle;2.28298180576884e-18!GO:0016874;ligase activity;3.83508631293976e-18!GO:0022403;cell cycle phase;4.60311690382222e-18!GO:0007067;mitosis;4.92079809170995e-18!GO:0048770;pigment granule;6.35469950439215e-18!GO:0042470;melanosome;6.35469950439215e-18!GO:0006457;protein folding;8.14656757427282e-18!GO:0031980;mitochondrial lumen;1.10055269006261e-17!GO:0005759;mitochondrial matrix;1.10055269006261e-17!GO:0051301;cell division;3.05152432321165e-17!GO:0006512;ubiquitin cycle;3.19083823219083e-17!GO:0022618;protein-RNA complex assembly;7.9783530553203e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;9.76205813828543e-17!GO:0032553;ribonucleotide binding;1.43808044108853e-16!GO:0032555;purine ribonucleotide binding;1.43808044108853e-16!GO:0019941;modification-dependent protein catabolic process;1.63724266557783e-16!GO:0043632;modification-dependent macromolecule catabolic process;1.63724266557783e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.76825045338327e-16!GO:0008134;transcription factor binding;3.39724157626643e-16!GO:0006281;DNA repair;3.40840388530138e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.49413116431605e-16!GO:0044257;cellular protein catabolic process;3.70287080253634e-16!GO:0006605;protein targeting;3.84634425387841e-16!GO:0044265;cellular macromolecule catabolic process;5.52943992595529e-16!GO:0017076;purine nucleotide binding;5.91965529741658e-16!GO:0000502;proteasome complex (sensu Eukaryota);6.25295717192294e-16!GO:0005746;mitochondrial respiratory chain;6.56480936789099e-16!GO:0005730;nucleolus;1.13832911198541e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;1.85896591772686e-15!GO:0005783;endoplasmic reticulum;4.59199420823374e-15!GO:0005635;nuclear envelope;5.02715261695903e-15!GO:0050136;NADH dehydrogenase (quinone) activity;6.09094754542069e-15!GO:0003954;NADH dehydrogenase activity;6.09094754542069e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.09094754542069e-15!GO:0000279;M phase;7.26848100130038e-15!GO:0006323;DNA packaging;9.66339718679885e-15!GO:0043285;biopolymer catabolic process;1.11596317227419e-14!GO:0005794;Golgi apparatus;1.26477293481574e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.92959428845742e-14!GO:0005761;mitochondrial ribosome;2.162327828784e-14!GO:0000313;organellar ribosome;2.162327828784e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.52242289799438e-14!GO:0031965;nuclear membrane;3.35888266692386e-14!GO:0030163;protein catabolic process;4.36149235304287e-14!GO:0005524;ATP binding;9.85378611348418e-14!GO:0048193;Golgi vesicle transport;1.25763720253482e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;1.45879655889976e-13!GO:0000375;RNA splicing, via transesterification reactions;1.45879655889976e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.45879655889976e-13!GO:0043412;biopolymer modification;1.92860838323772e-13!GO:0009057;macromolecule catabolic process;1.98593258862357e-13!GO:0009719;response to endogenous stimulus;2.03677776908916e-13!GO:0006260;DNA replication;2.43861701919736e-13!GO:0032559;adenyl ribonucleotide binding;2.60269604462189e-13!GO:0008135;translation factor activity, nucleic acid binding;3.30171225690981e-13!GO:0051186;cofactor metabolic process;3.57220341700019e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.01172281601803e-13!GO:0042773;ATP synthesis coupled electron transport;4.01172281601803e-13!GO:0044432;endoplasmic reticulum part;4.50248015153276e-13!GO:0030964;NADH dehydrogenase complex (quinone);4.59936133441439e-13!GO:0045271;respiratory chain complex I;4.59936133441439e-13!GO:0005747;mitochondrial respiratory chain complex I;4.59936133441439e-13!GO:0016604;nuclear body;6.68765660865763e-13!GO:0044453;nuclear membrane part;9.18717374377147e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.17885035738512e-12!GO:0044248;cellular catabolic process;1.32353618503138e-12!GO:0030554;adenyl nucleotide binding;1.32504917932445e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.32504917932445e-12!GO:0016192;vesicle-mediated transport;1.82428770291392e-12!GO:0051082;unfolded protein binding;2.0018797655376e-12!GO:0006913;nucleocytoplasmic transport;5.91825845227575e-12!GO:0006464;protein modification process;6.03942814014489e-12!GO:0000074;regulation of progression through cell cycle;6.08475876528829e-12!GO:0051726;regulation of cell cycle;6.54930757950638e-12!GO:0015630;microtubule cytoskeleton;8.39230102990044e-12!GO:0051169;nuclear transport;1.52371303926017e-11!GO:0050794;regulation of cellular process;1.70589697709534e-11!GO:0065004;protein-DNA complex assembly;1.77827175189463e-11!GO:0006732;coenzyme metabolic process;3.44755856468346e-11!GO:0000785;chromatin;3.51758320392955e-11!GO:0006333;chromatin assembly or disassembly;6.01714443160635e-11!GO:0008565;protein transporter activity;6.76246375730602e-11!GO:0043687;post-translational protein modification;7.91132343526831e-11!GO:0005643;nuclear pore;8.06303868993244e-11!GO:0048523;negative regulation of cellular process;8.86410970071363e-11!GO:0004386;helicase activity;1.34262818674366e-10!GO:0016607;nuclear speck;1.35018269797733e-10!GO:0042623;ATPase activity, coupled;1.61478158106667e-10!GO:0042254;ribosome biogenesis and assembly;1.98883877545476e-10!GO:0003743;translation initiation factor activity;2.08608770870278e-10!GO:0009055;electron carrier activity;2.79760805332861e-10!GO:0006403;RNA localization;2.93466081524212e-10!GO:0016887;ATPase activity;3.28263240824922e-10!GO:0006413;translational initiation;3.71206167508471e-10!GO:0050657;nucleic acid transport;4.13538088836258e-10!GO:0051236;establishment of RNA localization;4.13538088836258e-10!GO:0050658;RNA transport;4.13538088836258e-10!GO:0006446;regulation of translational initiation;4.14755711349738e-10!GO:0006461;protein complex assembly;7.58317199601719e-10!GO:0003712;transcription cofactor activity;8.13443359933708e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.77135550940158e-10!GO:0009259;ribonucleotide metabolic process;1.08880902978757e-09!GO:0006163;purine nucleotide metabolic process;1.64431646738492e-09!GO:0008639;small protein conjugating enzyme activity;2.23268537818943e-09!GO:0065002;intracellular protein transport across a membrane;2.27867038140997e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.36069334435376e-09!GO:0004842;ubiquitin-protein ligase activity;3.06842700610742e-09!GO:0005793;ER-Golgi intermediate compartment;3.6875621101151e-09!GO:0043566;structure-specific DNA binding;3.77393725341644e-09!GO:0050789;regulation of biological process;4.0969901839173e-09!GO:0005789;endoplasmic reticulum membrane;4.09710789942645e-09!GO:0006334;nucleosome assembly;4.98093727382078e-09!GO:0006164;purine nucleotide biosynthetic process;4.98093727382078e-09!GO:0048475;coated membrane;5.23417360691512e-09!GO:0030117;membrane coat;5.23417360691512e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.28507823900006e-09!GO:0009060;aerobic respiration;5.2958168097024e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.58670857975408e-09!GO:0019787;small conjugating protein ligase activity;6.3613636182698e-09!GO:0009150;purine ribonucleotide metabolic process;6.65189550879197e-09!GO:0048519;negative regulation of biological process;6.72103014559057e-09!GO:0012501;programmed cell death;8.40093041315661e-09!GO:0006366;transcription from RNA polymerase II promoter;1.04713237599766e-08!GO:0006915;apoptosis;1.17105130248878e-08!GO:0017038;protein import;1.20836354497032e-08!GO:0009260;ribonucleotide biosynthetic process;1.24844870093753e-08!GO:0045333;cellular respiration;1.32567348849536e-08!GO:0009152;purine ribonucleotide biosynthetic process;1.98830157909022e-08!GO:0051028;mRNA transport;2.48327818036989e-08!GO:0016568;chromatin modification;2.57711974787191e-08!GO:0006399;tRNA metabolic process;2.57711974787191e-08!GO:0031497;chromatin assembly;2.73171697193136e-08!GO:0008026;ATP-dependent helicase activity;2.92391394894302e-08!GO:0030120;vesicle coat;3.08413918955879e-08!GO:0030662;coated vesicle membrane;3.08413918955879e-08!GO:0046930;pore complex;3.69865473488922e-08!GO:0030532;small nuclear ribonucleoprotein complex;5.03646349359658e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.03984693724241e-08!GO:0015986;ATP synthesis coupled proton transport;5.17567010263386e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.17567010263386e-08!GO:0003697;single-stranded DNA binding;5.50998287586732e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.79483413832344e-08!GO:0005819;spindle;7.04114876080896e-08!GO:0003924;GTPase activity;8.02866981337356e-08!GO:0008219;cell death;8.99295964161108e-08!GO:0016265;death;8.99295964161108e-08!GO:0016881;acid-amino acid ligase activity;1.01184751335714e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.20320159850714e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.20320159850714e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.20320159850714e-07!GO:0019829;cation-transporting ATPase activity;1.23290524884076e-07!GO:0009141;nucleoside triphosphate metabolic process;1.37516259626101e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.60182797494711e-07!GO:0006099;tricarboxylic acid cycle;1.6418633917388e-07!GO:0046356;acetyl-CoA catabolic process;1.6418633917388e-07!GO:0043038;amino acid activation;1.67227280143842e-07!GO:0006418;tRNA aminoacylation for protein translation;1.67227280143842e-07!GO:0043039;tRNA aminoacylation;1.67227280143842e-07!GO:0006888;ER to Golgi vesicle-mediated transport;1.83538161167905e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.97991176508497e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.97991176508497e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.49895005779377e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.49895005779377e-07!GO:0000775;chromosome, pericentric region;2.91396679896517e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.16232711216796e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.16232711216796e-07!GO:0007010;cytoskeleton organization and biogenesis;3.95161020414903e-07!GO:0007005;mitochondrion organization and biogenesis;4.64780844683719e-07!GO:0005768;endosome;5.06103945640295e-07!GO:0005667;transcription factor complex;5.4932782932422e-07!GO:0006084;acetyl-CoA metabolic process;5.80506892477292e-07!GO:0009056;catabolic process;5.9690316208134e-07!GO:0031324;negative regulation of cellular metabolic process;6.48891404766427e-07!GO:0051188;cofactor biosynthetic process;6.74643500237658e-07!GO:0006364;rRNA processing;7.46313725838948e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;7.80993176339555e-07!GO:0005839;proteasome core complex (sensu Eukaryota);8.71557687641539e-07!GO:0051329;interphase of mitotic cell cycle;9.07628399959627e-07!GO:0009117;nucleotide metabolic process;1.16937916003574e-06!GO:0051325;interphase;1.17628142308749e-06!GO:0005813;centrosome;1.17840706516657e-06!GO:0045786;negative regulation of progression through cell cycle;1.18438897839894e-06!GO:0046034;ATP metabolic process;1.19027739937394e-06!GO:0006754;ATP biosynthetic process;1.19258391994419e-06!GO:0006753;nucleoside phosphate metabolic process;1.19258391994419e-06!GO:0000245;spliceosome assembly;1.29872748103217e-06!GO:0006793;phosphorus metabolic process;1.42440162215919e-06!GO:0006796;phosphate metabolic process;1.42440162215919e-06!GO:0051170;nuclear import;1.55603119452194e-06!GO:0016072;rRNA metabolic process;1.63036489728702e-06!GO:0031988;membrane-bound vesicle;1.70937328079351e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.71489773941547e-06!GO:0032446;protein modification by small protein conjugation;1.87769094499716e-06!GO:0007051;spindle organization and biogenesis;2.13203252260535e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.28481549857262e-06!GO:0009109;coenzyme catabolic process;2.39609996741034e-06!GO:0051246;regulation of protein metabolic process;2.43336106757788e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.4458264976967e-06!GO:0016740;transferase activity;2.60195941170566e-06!GO:0031252;leading edge;2.6822885727411e-06!GO:0009892;negative regulation of metabolic process;2.76533085424358e-06!GO:0006606;protein import into nucleus;3.17126275455583e-06!GO:0005798;Golgi-associated vesicle;3.24659245476425e-06!GO:0005815;microtubule organizing center;3.29557228770613e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.30853334280338e-06!GO:0044431;Golgi apparatus part;3.80990171468518e-06!GO:0016567;protein ubiquitination;3.91573539953233e-06!GO:0004298;threonine endopeptidase activity;3.97246042849589e-06!GO:0045259;proton-transporting ATP synthase complex;4.51221095027647e-06!GO:0043623;cellular protein complex assembly;5.438782495886e-06!GO:0000075;cell cycle checkpoint;6.52561349524501e-06!GO:0006613;cotranslational protein targeting to membrane;6.54652326928084e-06!GO:0051187;cofactor catabolic process;7.97963964319972e-06!GO:0016853;isomerase activity;8.83584106810893e-06!GO:0005788;endoplasmic reticulum lumen;8.94594549750694e-06!GO:0016310;phosphorylation;9.29512378481875e-06!GO:0016564;transcription repressor activity;9.35380182182546e-06!GO:0006261;DNA-dependent DNA replication;9.46721038231007e-06!GO:0043069;negative regulation of programmed cell death;9.48773260983072e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.59960382027277e-06!GO:0016126;sterol biosynthetic process;9.67399686849176e-06!GO:0006752;group transfer coenzyme metabolic process;1.05500392809775e-05!GO:0019222;regulation of metabolic process;1.06249534714817e-05!GO:0005525;GTP binding;1.07661059597404e-05!GO:0016481;negative regulation of transcription;1.11908005092062e-05!GO:0031982;vesicle;1.13658454299093e-05!GO:0019899;enzyme binding;1.1428776307708e-05!GO:0042981;regulation of apoptosis;1.30030369335741e-05!GO:0009108;coenzyme biosynthetic process;1.33141580366468e-05!GO:0043067;regulation of programmed cell death;1.34262305296395e-05!GO:0043066;negative regulation of apoptosis;1.42235308335326e-05!GO:0051427;hormone receptor binding;1.52474819679543e-05!GO:0031410;cytoplasmic vesicle;1.53189847659982e-05!GO:0000151;ubiquitin ligase complex;1.64695958304532e-05!GO:0008092;cytoskeletal protein binding;1.77935340863822e-05!GO:0003713;transcription coactivator activity;1.79438753336505e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.82032021869656e-05!GO:0003724;RNA helicase activity;1.82032021869656e-05!GO:0005762;mitochondrial large ribosomal subunit;2.10081934778158e-05!GO:0000315;organellar large ribosomal subunit;2.10081934778158e-05!GO:0016859;cis-trans isomerase activity;2.13700276764576e-05!GO:0016363;nuclear matrix;2.68729021895408e-05!GO:0006916;anti-apoptosis;2.92768666689316e-05!GO:0035257;nuclear hormone receptor binding;3.301625731702e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.68824929983661e-05!GO:0006695;cholesterol biosynthetic process;3.89982734470406e-05!GO:0016563;transcription activator activity;3.93632889008141e-05!GO:0016779;nucleotidyltransferase activity;4.10637426714873e-05!GO:0003690;double-stranded DNA binding;4.23550122564032e-05!GO:0003714;transcription corepressor activity;4.52266414673294e-05!GO:0048471;perinuclear region of cytoplasm;4.54302865832753e-05!GO:0005874;microtubule;5.25396658629207e-05!GO:0030118;clathrin coat;5.36716885673268e-05!GO:0030036;actin cytoskeleton organization and biogenesis;5.46431319884293e-05!GO:0005905;coated pit;5.71495014018376e-05!GO:0044440;endosomal part;5.87591842323557e-05!GO:0010008;endosome membrane;5.87591842323557e-05!GO:0015980;energy derivation by oxidation of organic compounds;6.288874946907e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.40075884329173e-05!GO:0008654;phospholipid biosynthetic process;6.56505344344084e-05!GO:0051168;nuclear export;7.43800597822697e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.63075166233993e-05!GO:0043021;ribonucleoprotein binding;7.64770960766804e-05!GO:0032561;guanyl ribonucleotide binding;7.76524328836719e-05!GO:0019001;guanyl nucleotide binding;7.76524328836719e-05!GO:0065007;biological regulation;8.40364553679462e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;9.45035059982542e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;9.4637966890477e-05!GO:0008094;DNA-dependent ATPase activity;0.000106422447048466!GO:0000776;kinetochore;0.000109772675487236!GO:0016787;hydrolase activity;0.000112990950249414!GO:0005657;replication fork;0.000114050933828719!GO:0005770;late endosome;0.000151204851349493!GO:0007093;mitotic cell cycle checkpoint;0.000160403654678856!GO:0003729;mRNA binding;0.000168668119267855!GO:0000314;organellar small ribosomal subunit;0.000179235157811287!GO:0005763;mitochondrial small ribosomal subunit;0.000179235157811287!GO:0030133;transport vesicle;0.000186760450560679!GO:0000786;nucleosome;0.000193453980792982!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000194158337192434!GO:0005769;early endosome;0.000199121723907212!GO:0006612;protein targeting to membrane;0.000209524097780132!GO:0030867;rough endoplasmic reticulum membrane;0.000212020584155211!GO:0008361;regulation of cell size;0.000216070892027258!GO:0016491;oxidoreductase activity;0.000241501004153599!GO:0016049;cell growth;0.000260985301294405!GO:0000139;Golgi membrane;0.000283774401777703!GO:0030029;actin filament-based process;0.000295112567720137!GO:0007264;small GTPase mediated signal transduction;0.00029601427727347!GO:0005885;Arp2/3 protein complex;0.000301250229340789!GO:0007059;chromosome segregation;0.000313994863383893!GO:0003682;chromatin binding;0.000324655367187222!GO:0045454;cell redox homeostasis;0.000402119900689221!GO:0006302;double-strand break repair;0.000408065508465824!GO:0003899;DNA-directed RNA polymerase activity;0.000424037431187564!GO:0005048;signal sequence binding;0.000424354638104854!GO:0008250;oligosaccharyl transferase complex;0.000450277113887099!GO:0008186;RNA-dependent ATPase activity;0.000474171071792213!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000507968230507134!GO:0007088;regulation of mitosis;0.000509192541383845!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000542205911507468!GO:0001558;regulation of cell growth;0.0005469269404701!GO:0005791;rough endoplasmic reticulum;0.000577925269810415!GO:0006626;protein targeting to mitochondrion;0.000605760700932105!GO:0030658;transport vesicle membrane;0.000611716630638416!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000613111721146083!GO:0007052;mitotic spindle organization and biogenesis;0.00061602414835401!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000625289050700052!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000727641752257999!GO:0051920;peroxiredoxin activity;0.000737202286465279!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000791038164738979!GO:0000059;protein import into nucleus, docking;0.000823485996675366!GO:0031323;regulation of cellular metabolic process;0.000841827998498508!GO:0009165;nucleotide biosynthetic process;0.000842698370000658!GO:0004576;oligosaccharyl transferase activity;0.000842698370000658!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000853301769881141!GO:0006402;mRNA catabolic process;0.000907112380243823!GO:0030119;AP-type membrane coat adaptor complex;0.000918943722045109!GO:0001726;ruffle;0.000940170881029817!GO:0006839;mitochondrial transport;0.000941180160250725!GO:0006310;DNA recombination;0.000972349365589787!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00101147350899208!GO:0042802;identical protein binding;0.00116838047050778!GO:0033116;ER-Golgi intermediate compartment membrane;0.0011872451565069!GO:0030131;clathrin adaptor complex;0.00122507690418217!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00124390736246286!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00124390736246286!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00124390736246286!GO:0003678;DNA helicase activity;0.00134371005024649!GO:0004004;ATP-dependent RNA helicase activity;0.00137178392365536!GO:0051252;regulation of RNA metabolic process;0.00144257244238927!GO:0007017;microtubule-based process;0.00144500586096561!GO:0006414;translational elongation;0.00145087755355982!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00145087755355982!GO:0051052;regulation of DNA metabolic process;0.00147354539759733!GO:0031968;organelle outer membrane;0.00156700810259861!GO:0043681;protein import into mitochondrion;0.00167719276152475!GO:0015631;tubulin binding;0.00173355795039948!GO:0016044;membrane organization and biogenesis;0.00173355795039948!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00176788179084726!GO:0008610;lipid biosynthetic process;0.00177704147455926!GO:0019867;outer membrane;0.0018863897523196!GO:0030660;Golgi-associated vesicle membrane;0.00190701290406237!GO:0048500;signal recognition particle;0.00190701290406237!GO:0005773;vacuole;0.00191423218355888!GO:0018196;peptidyl-asparagine modification;0.00194690578988723!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00194690578988723!GO:0006350;transcription;0.00199321104590656!GO:0003684;damaged DNA binding;0.00203396048540086!GO:0030521;androgen receptor signaling pathway;0.00226962342446143!GO:0006891;intra-Golgi vesicle-mediated transport;0.0023319767897148!GO:0045892;negative regulation of transcription, DNA-dependent;0.0023319767897148!GO:0006383;transcription from RNA polymerase III promoter;0.00234351149884288!GO:0030663;COPI coated vesicle membrane;0.00241151576160299!GO:0030126;COPI vesicle coat;0.00241151576160299!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00253137883269124!GO:0046474;glycerophospholipid biosynthetic process;0.0025941210106725!GO:0005741;mitochondrial outer membrane;0.0028004622856124!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0028004622856124!GO:0051789;response to protein stimulus;0.00280942595823295!GO:0006986;response to unfolded protein;0.00280942595823295!GO:0006352;transcription initiation;0.00287105444648544!GO:0030027;lamellipodium;0.0029858485424014!GO:0031124;mRNA 3'-end processing;0.00301189313509724!GO:0045893;positive regulation of transcription, DNA-dependent;0.00302845389467712!GO:0007243;protein kinase cascade;0.00311521237617976!GO:0004674;protein serine/threonine kinase activity;0.00333424884316428!GO:0000082;G1/S transition of mitotic cell cycle;0.00346652118448037!GO:0008286;insulin receptor signaling pathway;0.00348078777594297!GO:0030125;clathrin vesicle coat;0.00351460077763388!GO:0030665;clathrin coated vesicle membrane;0.00351460077763388!GO:0030132;clathrin coat of coated pit;0.00355598761175023!GO:0000902;cell morphogenesis;0.00359552263476505!GO:0032989;cellular structure morphogenesis;0.00359552263476505!GO:0035258;steroid hormone receptor binding;0.00368029740681484!GO:0008139;nuclear localization sequence binding;0.00368374967770974!GO:0005637;nuclear inner membrane;0.00373386684167628!GO:0007050;cell cycle arrest;0.00395062949634893!GO:0031072;heat shock protein binding;0.00398734168763455!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00398734168763455!GO:0005876;spindle microtubule;0.00403766663030322!GO:0008312;7S RNA binding;0.00406454514750086!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00409701770811723!GO:0045047;protein targeting to ER;0.00409701770811723!GO:0005684;U2-dependent spliceosome;0.00429557476504259!GO:0016197;endosome transport;0.00432483444058233!GO:0005869;dynactin complex;0.00443462191704503!GO:0043488;regulation of mRNA stability;0.00449857842410993!GO:0043487;regulation of RNA stability;0.00449857842410993!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00453360668393723!GO:0019843;rRNA binding;0.00470556809687393!GO:0010468;regulation of gene expression;0.00504880019008397!GO:0006091;generation of precursor metabolites and energy;0.00513547215814136!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00542853269798313!GO:0015399;primary active transmembrane transporter activity;0.00542853269798313!GO:0030137;COPI-coated vesicle;0.00553726612448722!GO:0046467;membrane lipid biosynthetic process;0.00553956107757889!GO:0008047;enzyme activator activity;0.00558786626994077!GO:0065009;regulation of a molecular function;0.00565507672204149!GO:0006405;RNA export from nucleus;0.00618771569937453!GO:0017166;vinculin binding;0.00634050545210543!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00634050545210543!GO:0006401;RNA catabolic process;0.00640964937335069!GO:0008168;methyltransferase activity;0.00645777879722099!GO:0016741;transferase activity, transferring one-carbon groups;0.00651950661769913!GO:0016251;general RNA polymerase II transcription factor activity;0.00655143820775516!GO:0006720;isoprenoid metabolic process;0.00674977457989448!GO:0006338;chromatin remodeling;0.0068478947708931!GO:0048487;beta-tubulin binding;0.00695974602713306!GO:0000086;G2/M transition of mitotic cell cycle;0.00706042956408912!GO:0030134;ER to Golgi transport vesicle;0.00708612701610802!GO:0048468;cell development;0.00712843413603735!GO:0008022;protein C-terminus binding;0.00715954147386017!GO:0008180;signalosome;0.00721188088221768!GO:0048522;positive regulation of cellular process;0.00724647412558568!GO:0046489;phosphoinositide biosynthetic process;0.007409358326234!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.007409358326234!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.007409358326234!GO:0045941;positive regulation of transcription;0.00746037241640813!GO:0016584;nucleosome positioning;0.00753005806532125!GO:0000792;heterochromatin;0.00754769266184813!GO:0007265;Ras protein signal transduction;0.00758243676683153!GO:0031123;RNA 3'-end processing;0.00762046441541503!GO:0000323;lytic vacuole;0.00776450723173377!GO:0005764;lysosome;0.00776450723173377!GO:0051087;chaperone binding;0.00796166304723152!GO:0003711;transcription elongation regulator activity;0.00822343092637561!GO:0000922;spindle pole;0.00850945470247581!GO:0016408;C-acyltransferase activity;0.00855651433627706!GO:0042393;histone binding;0.00871810620265772!GO:0030127;COPII vesicle coat;0.00879883779444472!GO:0012507;ER to Golgi transport vesicle membrane;0.00879883779444472!GO:0003779;actin binding;0.0088386166485147!GO:0051287;NAD binding;0.00898346516163971!GO:0000339;RNA cap binding;0.00908557438209803!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00916238881195762!GO:0006650;glycerophospholipid metabolic process;0.0102253635832541!GO:0006740;NADPH regeneration;0.0107240147768583!GO:0006098;pentose-phosphate shunt;0.0107240147768583!GO:0006289;nucleotide-excision repair;0.0107713525302199!GO:0051128;regulation of cellular component organization and biogenesis;0.01098828235937!GO:0040008;regulation of growth;0.0113288155134022!GO:0016272;prefoldin complex;0.0113847242912463!GO:0044452;nucleolar part;0.0114628692798767!GO:0040029;regulation of gene expression, epigenetic;0.0115143777131567!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0121005959124415!GO:0031625;ubiquitin protein ligase binding;0.0121788639545959!GO:0005832;chaperonin-containing T-complex;0.0122550849990374!GO:0022890;inorganic cation transmembrane transporter activity;0.0124401049840864!GO:0030659;cytoplasmic vesicle membrane;0.0124623992866521!GO:0030880;RNA polymerase complex;0.0125548045412297!GO:0006595;polyamine metabolic process;0.0127799131541373!GO:0000209;protein polyubiquitination;0.0130160782727415!GO:0007006;mitochondrial membrane organization and biogenesis;0.0130293333406987!GO:0051539;4 iron, 4 sulfur cluster binding;0.0131353601189451!GO:0005862;muscle thin filament tropomyosin;0.0131729948141293!GO:0043022;ribosome binding;0.0132587031046569!GO:0005083;small GTPase regulator activity;0.0134866061294715!GO:0050681;androgen receptor binding;0.0135350120340947!GO:0043130;ubiquitin binding;0.0135440709040934!GO:0032182;small conjugating protein binding;0.0135440709040934!GO:0006611;protein export from nucleus;0.0140603125455819!GO:0015992;proton transport;0.0143807991700613!GO:0044433;cytoplasmic vesicle part;0.014465587683003!GO:0032984;macromolecular complex disassembly;0.014465587683003!GO:0006144;purine base metabolic process;0.0147310305133281!GO:0033673;negative regulation of kinase activity;0.0147502192438465!GO:0006469;negative regulation of protein kinase activity;0.0147502192438465!GO:0008033;tRNA processing;0.0152201128073215!GO:0043624;cellular protein complex disassembly;0.0152201128073215!GO:0006509;membrane protein ectodomain proteolysis;0.0152531588120221!GO:0033619;membrane protein proteolysis;0.0152531588120221!GO:0012506;vesicle membrane;0.0155085851168623!GO:0000118;histone deacetylase complex;0.0155578544730922!GO:0032508;DNA duplex unwinding;0.0156373195028465!GO:0032392;DNA geometric change;0.0156373195028465!GO:0006892;post-Golgi vesicle-mediated transport;0.0156373195028465!GO:0031901;early endosome membrane;0.0158579686365025!GO:0005856;cytoskeleton;0.0159103776856057!GO:0004003;ATP-dependent DNA helicase activity;0.0160561174275495!GO:0000910;cytokinesis;0.0162455656364911!GO:0006818;hydrogen transport;0.016298351039038!GO:0045045;secretory pathway;0.0170181306154068!GO:0009116;nucleoside metabolic process;0.0175450330308231!GO:0000049;tRNA binding;0.0177201909888471!GO:0000228;nuclear chromosome;0.018047209147011!GO:0051101;regulation of DNA binding;0.018047209147011!GO:0008097;5S rRNA binding;0.0183554697999529!GO:0051540;metal cluster binding;0.0185161558264919!GO:0051536;iron-sulfur cluster binding;0.0185161558264919!GO:0006376;mRNA splice site selection;0.0191612738824952!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0191612738824952!GO:0030384;phosphoinositide metabolic process;0.0194191879984144!GO:0003746;translation elongation factor activity;0.0194191879984144!GO:0006275;regulation of DNA replication;0.0200013199477363!GO:0043284;biopolymer biosynthetic process;0.0201634197300621!GO:0030518;steroid hormone receptor signaling pathway;0.020390080705268!GO:0031577;spindle checkpoint;0.020390080705268!GO:0007021;tubulin folding;0.0205664939850049!GO:0009112;nucleobase metabolic process;0.0207049841614225!GO:0032906;transforming growth factor-beta2 production;0.0208968588336128!GO:0032909;regulation of transforming growth factor-beta2 production;0.0208968588336128!GO:0051348;negative regulation of transferase activity;0.0212342003759313!GO:0030032;lamellipodium biogenesis;0.0212501252710794!GO:0006268;DNA unwinding during replication;0.0214313045999782!GO:0007569;cell aging;0.0215533354666884!GO:0005096;GTPase activator activity;0.021609032160755!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.021609032160755!GO:0015002;heme-copper terminal oxidase activity;0.021609032160755!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.021609032160755!GO:0004129;cytochrome-c oxidase activity;0.021609032160755!GO:0005875;microtubule associated complex;0.0218641761132073!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0218641761132073!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0219559426588475!GO:0051059;NF-kappaB binding;0.022131712598088!GO:0006284;base-excision repair;0.0225229575474217!GO:0030176;integral to endoplasmic reticulum membrane;0.0226644386850925!GO:0007346;regulation of progression through mitotic cell cycle;0.0236732336255578!GO:0006378;mRNA polyadenylation;0.023688958013336!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0244298925333514!GO:0000428;DNA-directed RNA polymerase complex;0.0244298925333514!GO:0007266;Rho protein signal transduction;0.0248360924685359!GO:0032200;telomere organization and biogenesis;0.0249541141018618!GO:0000723;telomere maintenance;0.0249541141018618!GO:0005669;transcription factor TFIID complex;0.0261339318296436!GO:0046966;thyroid hormone receptor binding;0.0266362258906239!GO:0030496;midbody;0.0269033883013683!GO:0043241;protein complex disassembly;0.0269504388795625!GO:0051098;regulation of binding;0.0273500683842088!GO:0032774;RNA biosynthetic process;0.0279387514472063!GO:0016125;sterol metabolic process;0.0280645703132704!GO:0050662;coenzyme binding;0.0283325879147698!GO:0003702;RNA polymerase II transcription factor activity;0.0286651916757354!GO:0031529;ruffle organization and biogenesis;0.0287130728918953!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0287701563761203!GO:0000152;nuclear ubiquitin ligase complex;0.0289552408782514!GO:0007004;telomere maintenance via telomerase;0.0294632313714976!GO:0032259;methylation;0.0295735391689456!GO:0042585;germinal vesicle;0.0301759904065284!GO:0031970;organelle envelope lumen;0.0303202504243424!GO:0000096;sulfur amino acid metabolic process;0.0306579616661017!GO:0006351;transcription, DNA-dependent;0.031233234961287!GO:0043414;biopolymer methylation;0.0315798144854925!GO:0050750;low-density lipoprotein receptor binding;0.0316812566073397!GO:0019783;small conjugating protein-specific protease activity;0.0320061241895422!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0320400594541132!GO:0006672;ceramide metabolic process;0.0322762210016656!GO:0043492;ATPase activity, coupled to movement of substances;0.0324924956093229!GO:0008234;cysteine-type peptidase activity;0.0329544898453119!GO:0045792;negative regulation of cell size;0.0330451281027053!GO:0030140;trans-Golgi network transport vesicle;0.0336913447878885!GO:0005784;translocon complex;0.033900410763506!GO:0004843;ubiquitin-specific protease activity;0.0342583786898446!GO:0008629;induction of apoptosis by intracellular signals;0.0348625980104028!GO:0031575;G1/S transition checkpoint;0.0348625980104028!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0360236337051381!GO:0046483;heterocycle metabolic process;0.0365500523693113!GO:0007034;vacuolar transport;0.0374350993319518!GO:0017134;fibroblast growth factor binding;0.0384407808321633!GO:0004860;protein kinase inhibitor activity;0.0384667417500184!GO:0030695;GTPase regulator activity;0.0385074954431892!GO:0009081;branched chain family amino acid metabolic process;0.0386346015481811!GO:0050811;GABA receptor binding;0.0388395342856627!GO:0001952;regulation of cell-matrix adhesion;0.0388395342856627!GO:0008143;poly(A) binding;0.0390211232845317!GO:0016407;acetyltransferase activity;0.0394661248748934!GO:0030308;negative regulation of cell growth;0.0394661248748934!GO:0008652;amino acid biosynthetic process;0.0394661248748934!GO:0008538;proteasome activator activity;0.039619625714792!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0399583932423541!GO:0019798;procollagen-proline dioxygenase activity;0.0400727412928936!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0405959348236375!GO:0000819;sister chromatid segregation;0.0406432638703698!GO:0006979;response to oxidative stress;0.0412691546228424!GO:0008320;protein transmembrane transporter activity;0.0413041609129083!GO:0043495;protein anchor;0.0420935286821372!GO:0031371;ubiquitin conjugating enzyme complex;0.0421539019238266!GO:0006007;glucose catabolic process;0.0423450829312492!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0423450829312492!GO:0004680;casein kinase activity;0.0428214057387829!GO:0016860;intramolecular oxidoreductase activity;0.0433386016949525!GO:0004221;ubiquitin thiolesterase activity;0.0435224686332652!GO:0042158;lipoprotein biosynthetic process;0.04392666856891!GO:0006607;NLS-bearing substrate import into nucleus;0.044341187757813!GO:0000781;chromosome, telomeric region;0.044497318705993!GO:0000070;mitotic sister chromatid segregation;0.0446162496706857!GO:0006220;pyrimidine nucleotide metabolic process;0.0448531140546239!GO:0044454;nuclear chromosome part;0.0451147876973214!GO:0019752;carboxylic acid metabolic process;0.0451305074825495!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0451384914054567!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0459435252436639!GO:0030145;manganese ion binding;0.0464668213645452!GO:0046519;sphingoid metabolic process;0.0464668213645452!GO:0031543;peptidyl-proline dioxygenase activity;0.0465316374737558!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0466305722893198!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0466305722893198!GO:0006643;membrane lipid metabolic process;0.0470938971813696!GO:0044262;cellular carbohydrate metabolic process;0.0473425567356107!GO:0008299;isoprenoid biosynthetic process;0.047855076978355!GO:0022406;membrane docking;0.0480981311281051!GO:0048278;vesicle docking;0.0480981311281051!GO:0019904;protein domain specific binding;0.0480981311281051!GO:0035267;NuA4 histone acetyltransferase complex;0.0481405143354448!GO:0006739;NADP metabolic process;0.0483769912781521!GO:0042770;DNA damage response, signal transduction;0.0488107151366909!GO:0006497;protein amino acid lipidation;0.0490950301429977!GO:0046822;regulation of nucleocytoplasmic transport;0.0491387629713884!GO:0006082;organic acid metabolic process;0.0492227273198752!GO:0030508;thiol-disulfide exchange intermediate activity;0.049478610665461!GO:0005680;anaphase-promoting complex;0.0495738162385392!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0495817807518299!GO:0045334;clathrin-coated endocytic vesicle;0.0497750514903037!GO:0016585;chromatin remodeling complex;0.0499880840947955 | |||
|sample_id=11242 | |sample_id=11242 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=eye | |sample_tissue=eye | ||
|top_motifs=PAX1,9:2.78136976302;NKX2-1,4:2.5283676218;T:2.15571761417;GFI1:2.02320627188;NANOG:1.95452409631;SOX2:1.89676187943;SOX17:1.68708891171;CDC5L:1.67552234442;ZIC1..3:1.65713132596;NFY{A,B,C}:1.55080696644;STAT1,3:1.37757097505;MZF1:1.36992943763;ZNF384:1.32346889496;RBPJ:1.2832740849;VSX1,2:1.28157000687;TFDP1:1.23949196945;PAX4:1.22542251429;SOX{8,9,10}:1.16982775108;OCT4_SOX2{dimer}:1.14454880739;E2F1..5:1.1221986851;NKX2-3_NKX2-5:1.12071116558;MAZ:1.09200938051;POU5F1:1.08149292377;PBX1:1.07119441214;FOXP1:1.0627255431;NKX6-1,2:1.05771013333;ALX1:0.970010478215;EGR1..3:0.93840154289;LHX3,4:0.909257052175;GFI1B:0.877798434709;HOX{A4,D4}:0.853884447704;PATZ1:0.838723523901;GTF2A1,2:0.836656148806;NRF1:0.816861986948;TEAD1:0.814365979672;TLX1..3_NFIC{dimer}:0.805208864465;DBP:0.779109331756;PAX5:0.759349929751;EVI1:0.743226151093;SP1:0.741822365667;ZFP161:0.711047160415;ADNP_IRX_SIX_ZHX:0.695125853893;HMGA1,2:0.693678453482;EBF1:0.688463100661;ONECUT1,2:0.685323547011;NKX3-1:0.671390875158;ELK1,4_GABP{A,B1}:0.663282116444;POU3F1..4:0.604107846347;GTF2I:0.60262728483;CDX1,2,4:0.570860432972;LEF1_TCF7_TCF7L1,2:0.563065262483;ZNF143:0.557603968174;NR3C1:0.546537239201;SRF:0.517993501742;MTE{core}:0.504703990161;XCPE1{core}:0.482303500865;RFX1:0.472169277173;PRRX1,2:0.444778523975;FOXD3:0.431133525635;CRX:0.415201483152;NHLH1,2:0.410348490367;YY1:0.401674810535;KLF4:0.396874976525;FOXM1:0.393369634492;POU1F1:0.39290472363;HOXA9_MEIS1:0.385271189353;TBX4,5:0.332958767246;AHR_ARNT_ARNT2:0.327536080007;MYB:0.312129566172;MYFfamily:0.31049095671;PAX6:0.291292811701;MYBL2:0.279240223944;PRDM1:0.277112043602;TFAP4:0.259506498049;NFATC1..3:0.254477032264;EN1,2:0.246209692803;HIC1:0.245835386674;GATA4:0.234934661765;TFAP2{A,C}:0.225318064781;HNF4A_NR2F1,2:0.205060953873;NKX3-2:0.188409573847;TOPORS:0.17398055874;HMX1:0.172916331412;CUX2:0.162547096807;RFX2..5_RFXANK_RFXAP:0.160847757988;JUN:0.158556587153;TFAP2B:0.148298715276;NR6A1:0.14433623391;IKZF1:0.135551285755;HSF1,2:0.131517524964;EP300:0.131316388206;ZBTB6:0.12864749847;UFEwm:0.119066346147;MED-1{core}:0.115485613985;PAX8:0.113818160362;STAT2,4,6:0.0911521456848;TFCP2:0.0897272700516;GCM1,2:0.087007824497;HOX{A6,A7,B6,B7}:0.0859689138813;FOXA2:0.0832962769841;RREB1:0.0782113812403;RORA:0.0764003126552;TGIF1:0.0677965517798;ALX4:0.0600201922634;HOX{A5,B5}:0.0409297789582;BREu{core}:0.0206315068435;PITX1..3:0.015767969475;FOSL2:0.010547361412;FOX{I1,J2}:0.00818111552906;ZBTB16:-0.00844855156802;FOXP3:-0.0146830004985;ESRRA:-0.0161469399423;FOXN1:-0.0220608399307;RUNX1..3:-0.0308033788743;HNF1A:-0.0382783058856;GZF1:-0.0817576538031;NFE2:-0.101018914446;BACH2:-0.123571515215;IKZF2:-0.123861577654;SOX5:-0.131673065893;RXR{A,B,G}:-0.13659018164;POU6F1:-0.13763141252;ARID5B:-0.140474420954;MYOD1:-0.145133962452;MEF2{A,B,C,D}:-0.154426081328;HBP1_HMGB_SSRP1_UBTF:-0.159512629158;MTF1:-0.170795080512;LMO2:-0.176969780465;TAL1_TCF{3,4,12}:-0.179353960646;DMAP1_NCOR{1,2}_SMARC:-0.180389967277;FOS_FOS{B,L1}_JUN{B,D}:-0.184176679617;NFIX:-0.188360660999;ELF1,2,4:-0.190110099904;ATF2:-0.191725915751;ATF4:-0.194734906026;REST:-0.212266470841;BPTF:-0.229968083028;PDX1:-0.240634610332;AIRE:-0.241958388375;SMAD1..7,9:-0.252393507582;POU2F1..3:-0.274169653379;CREB1:-0.275873125309;IRF1,2:-0.285242273366;NFKB1_REL_RELA:-0.292981499047;NR1H4:-0.308581490901;NFE2L2:-0.311001506972;ZNF148:-0.320757056325;FOX{D1,D2}:-0.32319470886;FOXO1,3,4:-0.327025089464;TEF:-0.333920190883;TBP:-0.360561247213;TLX2:-0.367559000043;XBP1:-0.368154463129;IRF7:-0.368628497063;FOXQ1:-0.376194703546;TP53:-0.398113958165;STAT5{A,B}:-0.398703484251;SNAI1..3:-0.399230228111;SPZ1:-0.402897149213;NANOG{mouse}:-0.440093449012;NFIL3:-0.445540400104;SREBF1,2:-0.460790591032;SPIB:-0.472441747868;GLI1..3:-0.489031051445;PAX2:-0.500633671929;ZNF423:-0.514283358857;ZEB1:-0.517055071299;NR5A1,2:-0.541512706696;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.572465349772;NFE2L1:-0.57250175729;FOXL1:-0.594965381928;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.598988019594;SPI1:-0.601074568187;ESR1:-0.610468760778;ATF5_CREB3:-0.613779262844;HIF1A:-0.647758731805;HLF:-0.66591540198;CEBPA,B_DDIT3:-0.679587330544;ETS1,2:-0.680647633492;ATF6:-0.681323040759;ZNF238:-0.69722130801;GATA6:-0.697334622802;PAX3,7:-0.716080496764;NKX2-2,8:-0.756514574995;bHLH_family:-0.784888750156;AR:-0.79979464608;MAFB:-0.971394050242;HAND1,2:-1.00396990598;RXRA_VDR{dimer}:-1.00580548666;FOX{F1,F2,J1}:-1.07045073696;PPARG:-1.38096331253;HES1:-2.04379054622 | |top_motifs=PAX1,9:2.78136976302;NKX2-1,4:2.5283676218;T:2.15571761417;GFI1:2.02320627188;NANOG:1.95452409631;SOX2:1.89676187943;SOX17:1.68708891171;CDC5L:1.67552234442;ZIC1..3:1.65713132596;NFY{A,B,C}:1.55080696644;STAT1,3:1.37757097505;MZF1:1.36992943763;ZNF384:1.32346889496;RBPJ:1.2832740849;VSX1,2:1.28157000687;TFDP1:1.23949196945;PAX4:1.22542251429;SOX{8,9,10}:1.16982775108;OCT4_SOX2{dimer}:1.14454880739;E2F1..5:1.1221986851;NKX2-3_NKX2-5:1.12071116558;MAZ:1.09200938051;POU5F1:1.08149292377;PBX1:1.07119441214;FOXP1:1.0627255431;NKX6-1,2:1.05771013333;ALX1:0.970010478215;EGR1..3:0.93840154289;LHX3,4:0.909257052175;GFI1B:0.877798434709;HOX{A4,D4}:0.853884447704;PATZ1:0.838723523901;GTF2A1,2:0.836656148806;NRF1:0.816861986948;TEAD1:0.814365979672;TLX1..3_NFIC{dimer}:0.805208864465;DBP:0.779109331756;PAX5:0.759349929751;EVI1:0.743226151093;SP1:0.741822365667;ZFP161:0.711047160415;ADNP_IRX_SIX_ZHX:0.695125853893;HMGA1,2:0.693678453482;EBF1:0.688463100661;ONECUT1,2:0.685323547011;NKX3-1:0.671390875158;ELK1,4_GABP{A,B1}:0.663282116444;POU3F1..4:0.604107846347;GTF2I:0.60262728483;CDX1,2,4:0.570860432972;LEF1_TCF7_TCF7L1,2:0.563065262483;ZNF143:0.557603968174;NR3C1:0.546537239201;SRF:0.517993501742;MTE{core}:0.504703990161;XCPE1{core}:0.482303500865;RFX1:0.472169277173;PRRX1,2:0.444778523975;FOXD3:0.431133525635;CRX:0.415201483152;NHLH1,2:0.410348490367;YY1:0.401674810535;KLF4:0.396874976525;FOXM1:0.393369634492;POU1F1:0.39290472363;HOXA9_MEIS1:0.385271189353;TBX4,5:0.332958767246;AHR_ARNT_ARNT2:0.327536080007;MYB:0.312129566172;MYFfamily:0.31049095671;PAX6:0.291292811701;MYBL2:0.279240223944;PRDM1:0.277112043602;TFAP4:0.259506498049;NFATC1..3:0.254477032264;EN1,2:0.246209692803;HIC1:0.245835386674;GATA4:0.234934661765;TFAP2{A,C}:0.225318064781;HNF4A_NR2F1,2:0.205060953873;NKX3-2:0.188409573847;TOPORS:0.17398055874;HMX1:0.172916331412;CUX2:0.162547096807;RFX2..5_RFXANK_RFXAP:0.160847757988;JUN:0.158556587153;TFAP2B:0.148298715276;NR6A1:0.14433623391;IKZF1:0.135551285755;HSF1,2:0.131517524964;EP300:0.131316388206;ZBTB6:0.12864749847;UFEwm:0.119066346147;MED-1{core}:0.115485613985;PAX8:0.113818160362;STAT2,4,6:0.0911521456848;TFCP2:0.0897272700516;GCM1,2:0.087007824497;HOX{A6,A7,B6,B7}:0.0859689138813;FOXA2:0.0832962769841;RREB1:0.0782113812403;RORA:0.0764003126552;TGIF1:0.0677965517798;ALX4:0.0600201922634;HOX{A5,B5}:0.0409297789582;BREu{core}:0.0206315068435;PITX1..3:0.015767969475;FOSL2:0.010547361412;FOX{I1,J2}:0.00818111552906;ZBTB16:-0.00844855156802;FOXP3:-0.0146830004985;ESRRA:-0.0161469399423;FOXN1:-0.0220608399307;RUNX1..3:-0.0308033788743;HNF1A:-0.0382783058856;GZF1:-0.0817576538031;NFE2:-0.101018914446;BACH2:-0.123571515215;IKZF2:-0.123861577654;SOX5:-0.131673065893;RXR{A,B,G}:-0.13659018164;POU6F1:-0.13763141252;ARID5B:-0.140474420954;MYOD1:-0.145133962452;MEF2{A,B,C,D}:-0.154426081328;HBP1_HMGB_SSRP1_UBTF:-0.159512629158;MTF1:-0.170795080512;LMO2:-0.176969780465;TAL1_TCF{3,4,12}:-0.179353960646;DMAP1_NCOR{1,2}_SMARC:-0.180389967277;FOS_FOS{B,L1}_JUN{B,D}:-0.184176679617;NFIX:-0.188360660999;ELF1,2,4:-0.190110099904;ATF2:-0.191725915751;ATF4:-0.194734906026;REST:-0.212266470841;BPTF:-0.229968083028;PDX1:-0.240634610332;AIRE:-0.241958388375;SMAD1..7,9:-0.252393507582;POU2F1..3:-0.274169653379;CREB1:-0.275873125309;IRF1,2:-0.285242273366;NFKB1_REL_RELA:-0.292981499047;NR1H4:-0.308581490901;NFE2L2:-0.311001506972;ZNF148:-0.320757056325;FOX{D1,D2}:-0.32319470886;FOXO1,3,4:-0.327025089464;TEF:-0.333920190883;TBP:-0.360561247213;TLX2:-0.367559000043;XBP1:-0.368154463129;IRF7:-0.368628497063;FOXQ1:-0.376194703546;TP53:-0.398113958165;STAT5{A,B}:-0.398703484251;SNAI1..3:-0.399230228111;SPZ1:-0.402897149213;NANOG{mouse}:-0.440093449012;NFIL3:-0.445540400104;SREBF1,2:-0.460790591032;SPIB:-0.472441747868;GLI1..3:-0.489031051445;PAX2:-0.500633671929;ZNF423:-0.514283358857;ZEB1:-0.517055071299;NR5A1,2:-0.541512706696;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.572465349772;NFE2L1:-0.57250175729;FOXL1:-0.594965381928;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.598988019594;SPI1:-0.601074568187;ESR1:-0.610468760778;ATF5_CREB3:-0.613779262844;HIF1A:-0.647758731805;HLF:-0.66591540198;CEBPA,B_DDIT3:-0.679587330544;ETS1,2:-0.680647633492;ATF6:-0.681323040759;ZNF238:-0.69722130801;GATA6:-0.697334622802;PAX3,7:-0.716080496764;NKX2-2,8:-0.756514574995;bHLH_family:-0.784888750156;AR:-0.79979464608;MAFB:-0.971394050242;HAND1,2:-1.00396990598;RXRA_VDR{dimer}:-1.00580548666;FOX{F1,F2,J1}:-1.07045073696;PPARG:-1.38096331253;HES1:-2.04379054622 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11242-116D9;search_select_hide=table117:FF:11242-116D9 | |||
}} | }} | ||
Latest revision as of 16:27, 3 June 2020
| Name: | Ciliary Epithelial Cells, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10871 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10871
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10871
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0707 |
| 10 | 10 | 0.127 |
| 100 | 100 | 0.901 |
| 101 | 101 | 0.552 |
| 102 | 102 | 0.507 |
| 103 | 103 | 0.174 |
| 104 | 104 | 0.672 |
| 105 | 105 | 0.934 |
| 106 | 106 | 0.00927 |
| 107 | 107 | 0.623 |
| 108 | 108 | 0.331 |
| 109 | 109 | 0.0749 |
| 11 | 11 | 0.0454 |
| 110 | 110 | 0.379 |
| 111 | 111 | 0.00319 |
| 112 | 112 | 0.018 |
| 113 | 113 | 0.375 |
| 114 | 114 | 0.0212 |
| 115 | 115 | 0.614 |
| 116 | 116 | 0.723 |
| 117 | 117 | 0.167 |
| 118 | 118 | 0.243 |
| 119 | 119 | 0.126 |
| 12 | 12 | 0.555 |
| 120 | 120 | 0.58 |
| 121 | 121 | 0.995 |
| 122 | 122 | 0.845 |
| 123 | 123 | 0.0537 |
| 124 | 124 | 0.625 |
| 125 | 125 | 0.231 |
| 126 | 126 | 0.242 |
| 127 | 127 | 0.0657 |
| 128 | 128 | 0.111 |
| 129 | 129 | 0.233 |
| 13 | 13 | 0.456 |
| 130 | 130 | 0.0423 |
| 131 | 131 | 0.601 |
| 132 | 132 | 0.744 |
| 133 | 133 | 0.562 |
| 134 | 134 | 0.936 |
| 135 | 135 | 0.0292 |
| 136 | 136 | 0.643 |
| 137 | 137 | 0.29 |
| 138 | 138 | 0.101 |
| 139 | 139 | 0.00799 |
| 14 | 14 | 0.872 |
| 140 | 140 | 0.108 |
| 141 | 141 | 0.127 |
| 142 | 142 | 0.756 |
| 143 | 143 | 0.0194 |
| 144 | 144 | 0.894 |
| 145 | 145 | 0.802 |
| 146 | 146 | 0.821 |
| 147 | 147 | 0.918 |
| 148 | 148 | 0.0136 |
| 149 | 149 | 0.0819 |
| 15 | 15 | 0.0869 |
| 150 | 150 | 0.381 |
| 151 | 151 | 0.214 |
| 152 | 152 | 0.0438 |
| 153 | 153 | 0.237 |
| 154 | 154 | 0.897 |
| 155 | 155 | 0.0113 |
| 156 | 156 | 0.343 |
| 157 | 157 | 0.258 |
| 158 | 158 | 0.075 |
| 159 | 159 | 0.546 |
| 16 | 16 | 0.213 |
| 160 | 160 | 0.0798 |
| 161 | 161 | 0.594 |
| 162 | 162 | 0.567 |
| 163 | 163 | 0.659 |
| 164 | 164 | 0.0847 |
| 165 | 165 | 0.648 |
| 166 | 166 | 0.197 |
| 167 | 167 | 0.336 |
| 168 | 168 | 0.654 |
| 169 | 169 | 0.00463 |
| 17 | 17 | 0.0645 |
| 18 | 18 | 0.0329 |
| 19 | 19 | 0.244 |
| 2 | 2 | 0.467 |
| 20 | 20 | 0.937 |
| 21 | 21 | 0.42 |
| 22 | 22 | 0.243 |
| 23 | 23 | 0.107 |
| 24 | 24 | 0.75 |
| 25 | 25 | 0.434 |
| 26 | 26 | 0.179 |
| 27 | 27 | 0.316 |
| 28 | 28 | 0.941 |
| 29 | 29 | 0.13 |
| 3 | 3 | 0.113 |
| 30 | 30 | 0.853 |
| 31 | 31 | 0.435 |
| 32 | 32 | 0.166 |
| 33 | 33 | 0.48 |
| 34 | 34 | 0.532 |
| 35 | 35 | 0.279 |
| 36 | 36 | 0.0386 |
| 37 | 37 | 0.089 |
| 38 | 38 | 0.165 |
| 39 | 39 | 0.839 |
| 4 | 4 | 0.653 |
| 40 | 40 | 0.085 |
| 41 | 41 | 0.0847 |
| 42 | 42 | 0.335 |
| 43 | 43 | 0.1 |
| 44 | 44 | 0.16 |
| 45 | 45 | 0.552 |
| 46 | 46 | 0.0505 |
| 47 | 47 | 0.176 |
| 48 | 48 | 0.189 |
| 49 | 49 | 0.0637 |
| 5 | 5 | 0.148 |
| 50 | 50 | 0.766 |
| 51 | 51 | 0.404 |
| 52 | 52 | 0.525 |
| 53 | 53 | 0.657 |
| 54 | 54 | 0.345 |
| 55 | 55 | 0.605 |
| 56 | 56 | 0.506 |
| 57 | 57 | 0.434 |
| 58 | 58 | 0.181 |
| 59 | 59 | 0.076 |
| 6 | 6 | 0.865 |
| 60 | 60 | 0.0751 |
| 61 | 61 | 0.217 |
| 62 | 62 | 0.0675 |
| 63 | 63 | 0.137 |
| 64 | 64 | 0.181 |
| 65 | 65 | 0.0721 |
| 66 | 66 | 0.467 |
| 67 | 67 | 0.319 |
| 68 | 68 | 0.881 |
| 69 | 69 | 0.247 |
| 7 | 7 | 0.397 |
| 70 | 70 | 0.00528 |
| 71 | 71 | 0.116 |
| 72 | 72 | 0.282 |
| 73 | 73 | 0.0456 |
| 74 | 74 | 0.487 |
| 75 | 75 | 0.0349 |
| 76 | 76 | 0.166 |
| 77 | 77 | 0.136 |
| 78 | 78 | 0.546 |
| 79 | 79 | 0.0552 |
| 8 | 8 | 0.16 |
| 80 | 80 | 0.74 |
| 81 | 81 | 0.32 |
| 82 | 82 | 0.0246 |
| 83 | 83 | 0.576 |
| 84 | 84 | 0.173 |
| 85 | 85 | 0.0121 |
| 86 | 86 | 0.121 |
| 87 | 87 | 0.513 |
| 88 | 88 | 0.786 |
| 89 | 89 | 0.0779 |
| 9 | 9 | 0.424 |
| 90 | 90 | 0.497 |
| 91 | 91 | 0.55 |
| 92 | 92 | 0.0994 |
| 93 | 93 | 0.0382 |
| 94 | 94 | 0.0475 |
| 95 | 95 | 0.0472 |
| 96 | 96 | 0.12 |
| 97 | 97 | 0.97 |
| 98 | 98 | 0.0793 |
| 99 | 99 | 0.579 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10871
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000064 (ciliated cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000067 (ciliated epithelial cell)
0005012 (multi-ciliated epithelial cell)
0002304 (non-pigmented ciliary epithelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000970 (eye)
0000019 (camera-type eye)
0000483 (epithelium)
0000033 (head)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000020 (sense organ)
0010371 (ecto-epithelium)
0002203 (vasculature of eye)
0001768 (uvea)
0000488 (atypical epithelium)
0007625 (pigment epithelium of eye)
0001032 (sensory system)
0002049 (vasculature)
0002200 (vasculature of head)
0006876 (vasculature of organ)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0001778 (ciliary epithelium)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0004535 (cardiovascular system)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0001775 (ciliary body)
0010230 (eyeball of camera-type eye)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000040 (human ciliary epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)
