FFCP PHASE1:Hg19::chr1:209601463..209601482,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:209601463..209601482,+
|short_description=p@chr1:209601463..209601482,+
|description=CAGE_peak_at_chr1:209601463..209601482,+
|association_with_transcript=...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:209601463..209601482,+ | |||
|coexpression_cluster_id=C1848 | |||
|description=CAGE_peak_at_chr1:209601463..209601482,+ | |||
|id=chr1:209601463..209601482,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.60e-29!43;CL:0000066!2.06e-21!254;CL:0000223!2.77e-21!59;CL:0002368!2.14e-18!13;CL:0002159!2.58e-18!13;CL:0002251!2.57e-16!21;CL:0000622!6.31e-12!5;CL:0000244!2.86e-11!4;CL:0000731!2.86e-11!4;CL:0000076!1.49e-10!62;CL:0002202!3.76e-10!9;CL:0002632!3.76e-10!9;CL:0002077!4.16e-10!33;CL:0000154!7.21e-10!6;CL:0000068!9.21e-09!3;CL:0000069!9.21e-09!3;CL:0000307!9.21e-09!3;CL:0000377!9.21e-09!3;CL:0002328!1.28e-08!3;CL:0002621!3.25e-08!3;CL:0002166!4.34e-08!3;CL:0000362!4.39e-08!8;CL:0000240!2.39e-07!6;CL:0000311!2.39e-07!6;CL:0000079!2.39e-07!6;CL:0000237!2.39e-07!6;CL:0000036!2.39e-07!6;CL:0000357!2.39e-07!6;CL:0000114!2.39e-07!6;CL:0002623!2.73e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;6.24e-31;13!CL:0002159;1.65e-28;14!CL:0002076;6.95e-28;42!CL:0000244;4.58e-18;4!CL:0000731;4.58e-18;4!CL:0002202;7.73e-17;9!CL:0002632;7.73e-17;9!CL:0000307;8.58e-14;3!CL:0002328;1.52e-13;3!CL:0002077;2.04e-13;34!CL:0002621;7.73e-13;3!CL:0002166;1.26e-12;3!CL:0002251;5.63e-12;20!CL:0000240;7.16e-12;6!CL:0000311;7.16e-12;6!CL:0000079;7.16e-12;6!CL:0000237;7.16e-12;6!CL:0000362;8.76e-12;9!CL:0000575;3.83e-10;2!CL:0000317;1.18e-09;2!CL:1000448;1.18e-09;2!CL:0002308;1.18e-09;2!CL:0002140;1.18e-09;2!CL:0002327;2.64e-09;4!CL:0000312;2.75e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.19e-35,42;CL:0002368,5.08e-31,13;CL:0002159,1.56e-28,14;CL:0000223,4.67e-24,58;CL:0000066,4.18e-23,253;CL:0000244,4.58e-18,4;CL:0000731,4.58e-18,4;CL:0002202,7.42e-17,9;CL:0002632,7.42e-17,9;CL:0002077,1.72e-15,34;CL:0000068,8.40e-14,3;CL:0000069,8.40e-14,3;CL:0000307,8.40e-14,3;CL:0000377,8.40e-14,3;CL:0002328,1.46e-13,3;CL:0000076,4.03e-13,63;CL:0002621,7.12e-13,3;CL:0002166,1.16e-12,3;CL:0002251,5.99e-12,20;CL:0000240,7.16e-12,6;CL:0000311,7.16e-12,6;CL:0000079,7.16e-12,6;CL:0000237,7.16e-12,6;CL:0000036,7.16e-12,6;CL:0000357,7.16e-12,6;CL:0000114,7.16e-12,6;CL:0000362,8.76e-12,9;CL:0000575,3.83e-10,2;CL:0002321,1.08e-09,250;CL:0000317,1.18e-09,2;CL:1000448,1.18e-09,2;CL:0002308,1.18e-09,2;CL:0002140,1.18e-09,2;CL:0002327,2.28e-09,4;CL:0000312,2.75e-08,5;CL:0000221,6.01e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000377;8.58e-14;3!CL:0000223;2.39e-13;58!CL:0000357;7.16e-12;6!CL:0000114;7.16e-12;6 | |||
|ontology_enrichment_disease=DOID:1749!3.87e-18!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.82e-17;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.14e-17,14 | |||
|ontology_enrichment_uberon=UBERON:0000166!2.17e-18!21;UBERON:0001004!2.46e-18!72;UBERON:0000161!6.36e-17!35;UBERON:0000165!3.14e-15!28;UBERON:0000930!3.14e-15!28;UBERON:0003135!3.79e-14!11;UBERON:0000365!3.22e-13!5;UBERON:0004119!7.62e-13!169;UBERON:0000925!7.62e-13!169;UBERON:0006595!7.62e-13!169;UBERON:0003729!5.49e-12!5;UBERON:0003101!9.75e-12!22;UBERON:0000079!9.75e-12!22;UBERON:0003102!3.00e-11!95;UBERON:0005910!6.28e-11!6;UBERON:0001444!4.46e-10!48;UBERON:0000974!4.55e-10!10;UBERON:0003408!7.02e-10!10;UBERON:0003343!1.63e-09!4;UBERON:0004785!1.63e-09!4;UBERON:0001044!3.35e-09!6;UBERON:0003293!3.35e-09!6;UBERON:0003294!3.35e-09!6;UBERON:0010047!3.35e-09!6;UBERON:0000167!3.35e-09!6;UBERON:0000473!5.05e-09!8;UBERON:0000065!6.62e-09!53;UBERON:0000344!8.15e-09!12;UBERON:0004815!1.28e-08!3;UBERON:0002031!1.28e-08!3;UBERON:0001949!3.25e-08!3;UBERON:0007196!4.35e-08!14;UBERON:0001558!4.35e-08!14;UBERON:0001007!9.08e-08!155;UBERON:0001555!9.08e-08!155;UBERON:0007026!9.08e-08!155;UBERON:0006947!4.57e-07!3;UBERON:0004054!4.57e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.39e-16;12!UBERON:0003729;1.75e-14;13!UBERON:0000365;1.81e-14;5!UBERON:0004815;1.52e-13;3!UBERON:0002031;1.52e-13;3!UBERON:0001949;7.73e-13;3!UBERON:0005910;4.58e-12;6!UBERON:0000344;1.06e-11;20!UBERON:0007196;7.82e-10;15!UBERON:0001558;7.82e-10;15!UBERON:0005911;9.59e-10;36!UBERON:0002419;1.18e-09;2!UBERON:0007771;1.18e-09;2!UBERON:0003297;1.18e-09;2!UBERON:0001821;1.18e-09;2!UBERON:0003487;1.18e-09;2!UBERON:0001820;1.18e-09;2!UBERON:0001708;1.37e-09;4!UBERON:0008895;1.37e-09;4!UBERON:0003343;2.08e-09;4!UBERON:0004785;2.08e-09;4!UBERON:0000161;2.40e-09;19!UBERON:0000166;2.40e-09;19!UBERON:0001911;2.64e-09;4!UBERON:0002185;2.68e-08;5!UBERON:0004807;2.79e-08;22!UBERON:0005178;4.05e-08;34!UBERON:0002224;4.05e-08;34!UBERON:0005181;5.09e-08;35!UBERON:0000165;5.29e-08;28!UBERON:0011159;9.27e-08;5!UBERON:0010371;2.34e-07;31!UBERON:0000065;3.85e-07;44!UBERON:0001003;6.16e-07;15!UBERON:0007376;6.16e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.81e-14,5;UBERON:0003729,1.90e-14,13;UBERON:0001004,1.09e-13,74;UBERON:0004815,1.46e-13,3;UBERON:0002031,1.46e-13,3;UBERON:0003102,2.29e-13,99;UBERON:0001949,7.12e-13,3;UBERON:0004119,1.87e-12,160;UBERON:0000925,1.87e-12,160;UBERON:0006595,1.87e-12,160;UBERON:0005910,4.58e-12,6;UBERON:0000344,1.19e-11,20;UBERON:0007196,7.64e-10,15;UBERON:0001558,7.64e-10,15;UBERON:0002419,1.18e-09,2;UBERON:0007771,1.18e-09,2;UBERON:0003297,1.18e-09,2;UBERON:0001821,1.18e-09,2;UBERON:0003487,1.18e-09,2;UBERON:0001820,1.18e-09,2;UBERON:0005089,1.18e-09,2;UBERON:0005088,1.18e-09,2;UBERON:0001708,1.29e-09,4;UBERON:0008895,1.29e-09,4;UBERON:0000033,1.61e-09,56;UBERON:0001911,2.28e-09,4;UBERON:0005333,2.28e-09,4;UBERON:0008425,2.28e-09,4;UBERON:0005311,2.28e-09,4;UBERON:0003343,2.49e-09,4;UBERON:0004785,2.49e-09,4;UBERON:0000065,1.29e-08,54;UBERON:0005178,1.65e-08,34;UBERON:0002224,1.65e-08,34;UBERON:0005157,1.73e-08,47;UBERON:0000153,2.43e-08,62;UBERON:0007811,2.43e-08,62;UBERON:0002185,2.62e-08,5;UBERON:0005181,3.22e-08,35;UBERON:0000166,6.58e-08,22;UBERON:0011159,8.84e-08,5;UBERON:0000165,1.19e-07,29;UBERON:0000930,1.19e-07,29;UBERON:0000161,1.89e-07,36;UBERON:0005153,2.27e-07,37;UBERON:0001003,6.16e-07,15;UBERON:0007376,6.16e-07,15;UBERON:0007383,6.16e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,5.51652734687356,7.228942050678,15.5296684270051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.4163728477742,30.4043243083232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,35.7597122756878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28543450377605,5.45492241181669,2.86804595389004,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3165268284108,8.99214026060957,6.73544115157927,88.1441997909202,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,1.87467667973554,3.69560682037491,4.39502801451398,1.52249488594842,2.61570544662566,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,14.8250392186793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9110452219273,8.45078319847478,0,0,0,0,0,0,0,0,0,5.12383237619032,1.92190067365106,57.680946047552,4.75441570021085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4882102870808,18.0981614394663,8.71127878890581,0,10.3321289441095,18.5318623234388,21.2846473697604,11.486170010348,0,0,0,0,0,0,0,0,0,0,4.41072388765857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0.682760689712998,0,0,0,0,0,0,0,0,0,0,0,0,3.76444109552229,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,1.46988596121566,4.44001953560053,0.34945333648406,0,0,0,0,2.03676934625681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36065093879046,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.874862855734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2677097873833,8.70908164046162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06110208852154,2.12345502025933,1.10057159113007,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.6828739083758,0.691259661814092,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14264726326789,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0.26721740526556,0.36757959813938,0.250707539292375,0,0.267964130156178,0,0,0.639701945702943,0,0.0645889098360061,0.434523000071005,0,0,0,0.870866991587845,0,1.01028079521881,0.358611026963382,0,0.89543595472072,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,5.51652734687356,7.228942050678,15.5296684270051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.4163728477742,30.4043243083232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,35.7597122756878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28543450377605,5.45492241181669,2.86804595389004,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3165268284108,8.99214026060957,6.73544115157927,88.1441997909202,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,1.87467667973554,3.69560682037491,4.39502801451398,1.52249488594842,2.61570544662566,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20557117333613,14.8250392186793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9110452219273,8.45078319847478,0,0,0,0,0,0,0,0,0,5.12383237619032,1.92190067365106,57.680946047552,4.75441570021085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4882102870808,18.0981614394663,8.71127878890581,0,10.3321289441095,18.5318623234388,21.2846473697604,11.486170010348,0,0,0,0,0,0,0,0,0,0,4.41072388765857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0.682760689712998,0,0,0,0,0,0,0,0,0,0,0,0,3.76444109552229,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,1.46988596121566,4.44001953560053,0.34945333648406,0,0,0,0,2.03676934625681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36065093879046,0,0,0,0,1.15149118391667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.874862855734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2677097873833,8.70908164046162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06110208852154,2.12345502025933,1.10057159113007,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.6828739083758,0.691259661814092,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14264726326789,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0.26721740526556,0.36757959813938,0.250707539292375,0,0.267964130156178,0,0,0.639701945702943,0,0.0645889098360061,0.434523000071005,0,0,0,0.870866991587845,0,1.01028079521881,0.358611026963382,0,0.89543595472072,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:209601463..209601482,+ | |||
}} | }} |
Latest revision as of 03:17, 28 July 2015
Short description: | p@chr1:209601463..209601482, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209601463..209601482, + |
Coexpression cluster: | C1848_Corneal_Keratinocyte_Small_Urothelial_Esophageal_Tracheal_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.14e-17 | 14 |