FFCP PHASE1:Hg19::chr1:209601594..209601611,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:209601594..209601611,+
|short_description=p@chr1:209601594..209601611,+
|description=CAGE_peak_at_chr1:209601594..209601611,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:209601594..209601611,+ | |||
|coexpression_cluster_id=C1848 | |||
|description=CAGE_peak_at_chr1:209601594..209601611,+ | |||
|id=chr1:209601594..209601611,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.77e-25!43;CL:0000066!2.29e-18!254;CL:0000223!8.05e-18!59;CL:0002159!2.25e-17!13;CL:0002368!9.56e-17!13;CL:0002251!3.45e-13!21;CL:0002077!2.19e-12!33;CL:0000244!1.82e-10!4;CL:0000731!1.82e-10!4;CL:0002202!3.48e-09!9;CL:0002632!3.48e-09!9;CL:0000076!1.83e-08!62;CL:0000068!4.42e-08!3;CL:0000069!4.42e-08!3;CL:0000307!4.42e-08!3;CL:0000377!4.42e-08!3;CL:0002166!4.74e-08!3;CL:0002621!6.10e-08!3;CL:0002328!7.65e-08!3;CL:0000622!1.22e-07!5;CL:0000362!1.44e-07!8;CL:0000240!7.42e-07!6;CL:0000311!7.42e-07!6;CL:0000079!7.42e-07!6;CL:0000237!7.42e-07!6;CL:0000036!7.42e-07!6;CL:0000357!7.42e-07!6;CL:0000114!7.42e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.04e-29;42!CL:0002368;1.32e-24;13!CL:0002159;1.61e-23;14!CL:0002251;6.18e-18;20!CL:0000244;9.82e-15;4!CL:0000731;9.82e-15;4!CL:0002202;2.51e-13;9!CL:0002632;2.51e-13;9!CL:0002077;1.15e-12;34!CL:0000307;3.31e-11;3!CL:0002166;3.79e-11;3!CL:0002621;5.41e-11;3!CL:0002328;7.08e-11;3!CL:0000622;1.02e-10;5!CL:0000240;1.02e-09;6!CL:0000311;1.02e-09;6!CL:0000079;1.02e-09;6!CL:0000237;1.02e-09;6!CL:0000362;1.24e-09;9!CL:0000154;6.14e-09;6!CL:0000575;1.79e-08;2!CL:0000317;3.50e-08;2!CL:1000448;3.50e-08;2!CL:0002308;3.50e-08;2!CL:0002140;3.50e-08;2!CL:0002327;1.54e-07;4!CL:0000312;7.55e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.14e-36,42;CL:0000223,3.51e-27,58;CL:0002368,1.44e-24,13;CL:0000066,2.15e-24,253;CL:0002159,1.57e-23,14;CL:0002251,5.92e-18,20;CL:0000244,1.02e-14,4;CL:0000731,1.02e-14,4;CL:0002077,2.78e-14,34;CL:0002202,2.65e-13,9;CL:0002632,2.65e-13,9;CL:0000076,2.80e-11,63;CL:0000068,3.37e-11,3;CL:0000069,3.37e-11,3;CL:0000307,3.37e-11,3;CL:0000377,3.37e-11,3;CL:0002166,3.73e-11,3;CL:0002621,5.41e-11,3;CL:0002328,7.57e-11,3;CL:0002321,9.00e-11,250;CL:0000622,9.68e-11,5;CL:0000240,1.01e-09,6;CL:0000311,1.01e-09,6;CL:0000079,1.01e-09,6;CL:0000237,1.01e-09,6;CL:0000036,1.01e-09,6;CL:0000357,1.01e-09,6;CL:0000114,1.01e-09,6;CL:0000362,1.23e-09,9;CL:0000154,5.89e-09,6;CL:0000575,1.79e-08,2;CL:0000317,3.50e-08,2;CL:1000448,3.50e-08,2;CL:0002308,3.50e-08,2;CL:0002140,3.50e-08,2;CL:0002327,1.49e-07,4;CL:0000221,6.00e-07,72;CL:0000312,7.48e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;6.73e-14;58!CL:0000377;3.31e-11;3!CL:0000357;1.02e-09;6!CL:0000114;1.02e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!7.91e-17!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.79e-17;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.85e-17,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.18e-16!72;UBERON:0000161!1.40e-13!35;UBERON:0004119!1.76e-12!169;UBERON:0000925!1.76e-12!169;UBERON:0006595!1.76e-12!169;UBERON:0000166!1.78e-12!21;UBERON:0000365!2.59e-12!5;UBERON:0003729!2.52e-11!5;UBERON:0003102!7.64e-11!95;UBERON:0000165!1.91e-10!28;UBERON:0000930!1.91e-10!28;UBERON:0005910!3.62e-10!6;UBERON:0000065!4.29e-10!53;UBERON:0003343!4.84e-09!4;UBERON:0004785!4.84e-09!4;UBERON:0000344!3.17e-08!12;UBERON:0001949!6.10e-08!3;UBERON:0004815!7.65e-08!3;UBERON:0002031!7.65e-08!3;UBERON:0001007!1.00e-07!155;UBERON:0001555!1.00e-07!155;UBERON:0007026!1.00e-07!155;UBERON:0007196!2.32e-07!14;UBERON:0001558!2.32e-07!14;UBERON:0000974!4.57e-07!10;UBERON:0001444!5.90e-07!48;UBERON:0005178!6.97e-07!34;UBERON:0002224!6.97e-07!34;UBERON:0006947!8.74e-07!3;UBERON:0004054!8.74e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.86e-17;5!UBERON:0000486;2.54e-17;12!UBERON:0005910;1.73e-14;6!UBERON:0000161;4.32e-12;19!UBERON:0000166;4.32e-12;19!UBERON:0003729;6.98e-12;13!UBERON:0000344;8.64e-12;20!UBERON:0000165;9.60e-12;28!UBERON:0001949;5.41e-11;3!UBERON:0004815;7.08e-11;3!UBERON:0002031;7.08e-11;3!UBERON:0005911;8.26e-11;36!UBERON:0007196;3.89e-10;15!UBERON:0001558;3.89e-10;15!UBERON:0001708;1.87e-08;4!UBERON:0008895;1.87e-08;4!UBERON:0002419;3.50e-08;2!UBERON:0007771;3.50e-08;2!UBERON:0003297;3.50e-08;2!UBERON:0001821;3.50e-08;2!UBERON:0003487;3.50e-08;2!UBERON:0001820;3.50e-08;2!UBERON:0003126;6.84e-08;7!UBERON:0001005;6.84e-08;7!UBERON:0003343;7.48e-08;4!UBERON:0004785;7.48e-08;4!UBERON:0001911;1.54e-07;4!UBERON:0006562;2.23e-07;2!UBERON:0010371;2.71e-07;31!UBERON:0005178;3.18e-07;34!UBERON:0002224;3.18e-07;34!UBERON:0005181;5.99e-07;35!UBERON:0001004;6.69e-07;65!UBERON:0003350;7.15e-07;8!UBERON:0011159;7.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.49e-17,99;UBERON:0000365,1.89e-17,5;UBERON:0001004,2.04e-17,74;UBERON:0004119,2.93e-15,160;UBERON:0000925,2.93e-15,160;UBERON:0006595,2.93e-15,160;UBERON:0005910,1.75e-14,6;UBERON:0000033,6.34e-13,56;UBERON:0000166,1.21e-12,22;UBERON:0000161,3.36e-12,36;UBERON:0003729,6.87e-12,13;UBERON:0000344,8.18e-12,20;UBERON:0000165,2.75e-11,29;UBERON:0000930,2.75e-11,29;UBERON:0000153,2.80e-11,62;UBERON:0007811,2.80e-11,62;UBERON:0001949,5.41e-11,3;UBERON:0004815,7.57e-11,3;UBERON:0002031,7.57e-11,3;UBERON:0007196,3.94e-10,15;UBERON:0001558,3.94e-10,15;UBERON:0000065,3.98e-10,54;UBERON:0010188,3.93e-09,6;UBERON:0002539,3.93e-09,6;UBERON:0008816,3.93e-09,6;UBERON:0001007,1.33e-08,145;UBERON:0001555,1.33e-08,145;UBERON:0007026,1.33e-08,145;UBERON:0001444,1.65e-08,49;UBERON:0001708,1.85e-08,4;UBERON:0008895,1.85e-08,4;UBERON:0002419,3.50e-08,2;UBERON:0007771,3.50e-08,2;UBERON:0003297,3.50e-08,2;UBERON:0001821,3.50e-08,2;UBERON:0003487,3.50e-08,2;UBERON:0001820,3.50e-08,2;UBERON:0005089,3.50e-08,2;UBERON:0005088,3.50e-08,2;UBERON:0003126,6.72e-08,7;UBERON:0001005,6.72e-08,7;UBERON:0005178,7.25e-08,34;UBERON:0002224,7.25e-08,34;UBERON:0003343,7.30e-08,4;UBERON:0004785,7.30e-08,4;UBERON:0005181,1.38e-07,35;UBERON:0001911,1.49e-07,4;UBERON:0005333,1.49e-07,4;UBERON:0008425,1.49e-07,4;UBERON:0005311,1.49e-07,4;UBERON:0005157,1.72e-07,47;UBERON:0003350,7.09e-07,8;UBERON:0011159,7.78e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,11.0330546937471,18.3735610454733,15.5296684270051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,170.49019492091,60.0670797310776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.2638007599458,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66304265816484,18.5467362001768,27.5332411573444,0.243947412259191,0,0.232387885739037,0.621966330092223,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.2783547449656,25.8524032492525,10.9576579928678,134.438422370185,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9974134378843,18.9819804864711,27.2208186705382,1.43293636324557,5.81267877027924,5.36735750831296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0430499757792,11.7863665837947,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.9706215198469,28.6026508256069,0,0,0,0,0,0,0,0,0,18.5119105204295,10.3782636377157,110.384996307815,8.49725359186619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.6293109960045,33.5151137767894,13.0669181833587,0,33.1489136956847,90.9745968605178,30.1532504404939,15.1617444136593,0,0,0,0,0,0,0,0,0,0,6.61608583148786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,3.98277068999249,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,17.0096968019896,0.230850775511391,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54364004611717,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,9.70124734402339,7.40003255933422,0.698906672968121,0,0,0,0,2.71569246167574,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,13.7528221915699,0,0,0,0,2.1110671705139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,2.62458856720424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,16.5057819108944,13.6856997207254,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20182908055436,11.796972334774,9.72171572164899,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2258283102286,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,1.24329698497822,1.87790324803345,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9985308428752,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.327796715891087,0,0,0.801652215796681,0.827054095813604,1.75495277504663,0,0,0,0,0.639701945702943,0,0,0.248298857183432,0,0,0,4.35433495793923,0,1.75115337837928,1.72133292942423,0,3.98876016193775,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,11.0330546937471,18.3735610454733,15.5296684270051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,170.49019492091,60.0670797310776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.2638007599458,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66304265816484,18.5467362001768,27.5332411573444,0.243947412259191,0,0.232387885739037,0.621966330092223,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.2783547449656,25.8524032492525,10.9576579928678,134.438422370185,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9974134378843,18.9819804864711,27.2208186705382,1.43293636324557,5.81267877027924,5.36735750831296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0430499757792,11.7863665837947,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.9706215198469,28.6026508256069,0,0,0,0,0,0,0,0,0,18.5119105204295,10.3782636377157,110.384996307815,8.49725359186619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.6293109960045,33.5151137767894,13.0669181833587,0,33.1489136956847,90.9745968605178,30.1532504404939,15.1617444136593,0,0,0,0,0,0,0,0,0,0,6.61608583148786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,3.98277068999249,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,17.0096968019896,0.230850775511391,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54364004611717,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,9.70124734402339,7.40003255933422,0.698906672968121,0,0,0,0,2.71569246167574,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0,13.7528221915699,0,0,0,0,2.1110671705139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,2.62458856720424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,16.5057819108944,13.6856997207254,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20182908055436,11.796972334774,9.72171572164899,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2258283102286,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,1.24329698497822,1.87790324803345,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9985308428752,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.327796715891087,0,0,0.801652215796681,0.827054095813604,1.75495277504663,0,0,0,0,0.639701945702943,0,0,0.248298857183432,0,0,0,4.35433495793923,0,1.75115337837928,1.72133292942423,0,3.98876016193775,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:209601594..209601611,+ | |||
}} | }} |
Latest revision as of 03:18, 28 July 2015
Short description: | p@chr1:209601594..209601611, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209601594..209601611, + |
Coexpression cluster: | C1848_Corneal_Keratinocyte_Small_Urothelial_Esophageal_Tracheal_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.85e-17 | 14 |