FFCP PHASE1:Hg19::chr1:94240961..94241024,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:94240961..94241024,-
|short_description=p1@ENST00000433544
|description=CAGE_peak_1_at_ENST00000433544_5end
|association_with_transcript=0bp_to_ENST0000043...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000433544_5end | |||
|cluster_id=chr1:94240961..94241024,- | |||
|coexpression_cluster_id=C4010 | |||
|description=CAGE_peak_1_at_ENST00000433544_5end | |||
|id=chr1:94240961..94241024,- | |||
|ontology_enrichment_celltype=CL:0000066!3.07e-43!254;CL:0002076!6.23e-31!43;CL:0000223!1.28e-24!59;CL:0002368!1.93e-17!13;CL:0002251!1.44e-13!21;CL:0002202!6.88e-12!9;CL:0002632!6.88e-12!9;CL:0002159!1.54e-11!13;CL:0000082!2.50e-10!19;CL:0000076!2.03e-09!62;CL:0000063!5.06e-09!578;CL:0000220!9.56e-09!246;CL:0002321!1.48e-08!248;CL:0002077!1.90e-08!33;CL:0000622!7.34e-08!5;CL:0000244!2.11e-07!4;CL:0000731!2.11e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;6.99e-20;13!CL:0002076;8.23e-20;42!CL:0002159;7.73e-17;14!CL:0002202;1.01e-14;9!CL:0002632;1.01e-14;9!CL:0000244;6.68e-11;4!CL:0000731;6.68e-11;4!CL:0000082;3.89e-10;19!CL:0000307;1.24e-09;3!CL:0002328;2.14e-09;3!CL:0002166;3.78e-09;3!CL:0002621;1.03e-08;3!CL:0002077;2.35e-07;34!CL:0002251;2.40e-07;20!CL:0002327;4.31e-07;4!CL:0000240;4.86e-07;6!CL:0000311;4.86e-07;6!CL:0000079;4.86e-07;6!CL:0000237;4.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.63e-29,253;CL:0002076,1.15e-25,42;CL:0000223,9.47e-21,58;CL:0002368,7.51e-20,13;CL:0002159,8.32e-17,14;CL:0002202,1.04e-14,9;CL:0002632,1.04e-14,9;CL:0000244,6.18e-11,4;CL:0000731,6.18e-11,4;CL:0000082,4.03e-10,19;CL:0000068,1.24e-09,3;CL:0000069,1.24e-09,3;CL:0000307,1.24e-09,3;CL:0000377,1.24e-09,3;CL:0002328,2.24e-09,3;CL:0002166,3.78e-09,3;CL:0002621,1.27e-08,3;CL:0002077,2.12e-08,34;CL:0002251,2.56e-07,20;CL:0002327,4.23e-07,4;CL:0000240,4.95e-07,6;CL:0000311,4.95e-07,6;CL:0000079,4.95e-07,6;CL:0000237,4.95e-07,6;CL:0000036,4.95e-07,6;CL:0000357,4.95e-07,6;CL:0000114,4.95e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;2.12e-11;58!CL:0000377;1.24e-09;3!CL:0000357;4.86e-07;6!CL:0000114;4.86e-07;6 | |||
|ontology_enrichment_disease=DOID:305!9.96e-18!106;DOID:1749!6.01e-15!14;DOID:0050687!2.35e-13!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.83e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.08e-09,106;DOID:1749,4.92e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.56e-20!169;UBERON:0000925!2.56e-20!169;UBERON:0006595!2.56e-20!169;UBERON:0001004!2.69e-14!72;UBERON:0001007!3.24e-13!155;UBERON:0001555!3.24e-13!155;UBERON:0007026!3.24e-13!155;UBERON:0005911!4.56e-13!82;UBERON:0004807!9.79e-13!28;UBERON:0000077!2.14e-12!130;UBERON:0005153!3.85e-12!37;UBERON:0005631!1.43e-11!14;UBERON:0000158!1.43e-11!14;UBERON:0000464!5.29e-11!104;UBERON:0000065!2.10e-10!53;UBERON:0004802!2.50e-10!19;UBERON:0000115!2.50e-10!19;UBERON:0005178!2.78e-10!34;UBERON:0002224!2.78e-10!34;UBERON:0001041!3.68e-10!98;UBERON:0000466!7.03e-10!126;UBERON:0005181!7.48e-10!35;UBERON:0005157!1.83e-09!51;UBERON:0004921!1.86e-09!129;UBERON:0004185!1.86e-09!129;UBERON:0000365!5.47e-09!5;UBERON:0007196!1.18e-08!14;UBERON:0001558!1.18e-08!14;UBERON:0002048!1.70e-08!22;UBERON:0000117!1.70e-08!22;UBERON:0000171!1.70e-08!22;UBERON:0000170!1.70e-08!22;UBERON:0005597!1.70e-08!22;UBERON:0000118!1.70e-08!22;UBERON:0003729!1.91e-08!5;UBERON:0001048!2.48e-08!168;UBERON:0000072!4.15e-08!46;UBERON:0003124!1.28e-07!7;UBERON:0008947!1.52e-07!38;UBERON:0003258!1.52e-07!38;UBERON:0005910!2.22e-07!6;UBERON:0000161!3.39e-07!35;UBERON:0003343!9.08e-07!4;UBERON:0004785!9.08e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;2.67e-15;22!UBERON:0005911;1.32e-14;36!UBERON:0000365;1.92e-13;5!UBERON:0000486;3.83e-13;12!UBERON:0005910;3.86e-11;6!UBERON:0005178;2.99e-10;34!UBERON:0002224;2.99e-10;34!UBERON:0004802;3.89e-10;19!UBERON:0000115;3.89e-10;19!UBERON:0004815;2.14e-09;3!UBERON:0002031;2.14e-09;3!UBERON:0005181;7.65e-09;35!UBERON:0001949;1.03e-08;3!UBERON:0002048;1.64e-08;22!UBERON:0000117;1.64e-08;22!UBERON:0000171;1.64e-08;22!UBERON:0000170;1.64e-08;22!UBERON:0007196;2.31e-08;15!UBERON:0001558;2.31e-08;15!UBERON:0000344;1.26e-07;20!UBERON:0000065;1.92e-07;44!UBERON:0000072;3.41e-07;37!UBERON:0001911;4.31e-07;4!UBERON:0003729;5.27e-07;13!UBERON:0001708;6.09e-07;4!UBERON:0008895;6.09e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,2.28e-15,37;UBERON:0005157,1.37e-14,47;UBERON:0000365,1.80e-13,5;UBERON:0004807,2.30e-11,28;UBERON:0005910,3.66e-11,6;UBERON:0005178,7.73e-11,34;UBERON:0002224,7.73e-11,34;UBERON:0001004,7.93e-11,74;UBERON:0004119,1.33e-10,160;UBERON:0000925,1.33e-10,160;UBERON:0006595,1.33e-10,160;UBERON:0005181,1.93e-10,35;UBERON:0004802,4.03e-10,19;UBERON:0000115,4.03e-10,19;UBERON:0004815,2.24e-09,3;UBERON:0002031,2.24e-09,3;UBERON:0000065,2.88e-09,54;UBERON:0005911,3.20e-09,82;UBERON:0001949,1.27e-08,3;UBERON:0002048,1.69e-08,22;UBERON:0000117,1.69e-08,22;UBERON:0000171,1.69e-08,22;UBERON:0000170,1.69e-08,22;UBERON:0005597,1.69e-08,22;UBERON:0000118,1.69e-08,22;UBERON:0007196,2.35e-08,15;UBERON:0001558,2.35e-08,15;UBERON:0003102,2.78e-08,99;UBERON:0005631,3.67e-08,14;UBERON:0000158,3.67e-08,14;UBERON:0008947,6.21e-08,38;UBERON:0003258,6.21e-08,38;UBERON:0000344,1.38e-07,20;UBERON:0001911,4.23e-07,4;UBERON:0005333,4.23e-07,4;UBERON:0008425,4.23e-07,4;UBERON:0005311,4.23e-07,4;UBERON:0000072,4.26e-07,47;UBERON:0003729,5.80e-07,13;UBERON:0001708,6.09e-07,4;UBERON:0008895,6.09e-07,4;UBERON:0000161,7.06e-07,36 | |||
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| ||
|short_description=p1@ENST00000433544 | |||
}} | }} |
Latest revision as of 11:27, 28 July 2015
Short description: | p1@ENST00000433544 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000433544_5end |
Coexpression cluster: | C4010_ductal_giant_squamous_Tracheal_bronchogenic_Keratinocyte_amniotic |
Association with transcript: | 0bp_to_ENST00000433544_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.63e-29 | 253 |
endo-epithelial cell | 1.15e-25 | 42 |
endodermal cell | 9.47e-21 | 58 |
respiratory epithelial cell | 7.51e-20 | 13 |
general ecto-epithelial cell | 8.32e-17 | 14 |
epithelial cell of tracheobronchial tree | 1.04e-14 | 9 |
epithelial cell of lower respiratory tract | 1.04e-14 | 9 |
transitional epithelial cell | 6.18e-11 | 4 |
urothelial cell | 6.18e-11 | 4 |
epithelial cell of lung | 4.03e-10 | 19 |
duct epithelial cell | 1.24e-09 | 3 |
branched duct epithelial cell | 1.24e-09 | 3 |
tracheal epithelial cell | 1.24e-09 | 3 |
tracheoblast | 1.24e-09 | 3 |
bronchial epithelial cell | 2.24e-09 | 3 |
epithelial cell of Malassez | 3.78e-09 | 3 |
gingival epithelial cell | 1.27e-08 | 3 |
ecto-epithelial cell | 2.12e-08 | 34 |
epithelial cell of alimentary canal | 2.56e-07 | 20 |
mammary gland epithelial cell | 4.23e-07 | 4 |
stratified squamous epithelial cell | 4.95e-07 | 6 |
keratin accumulating cell | 4.95e-07 | 6 |
stratified epithelial cell | 4.95e-07 | 6 |
keratinizing barrier epithelial cell | 4.95e-07 | 6 |
epithelial fate stem cell | 4.95e-07 | 6 |
stratified epithelial stem cell | 4.95e-07 | 6 |
surface ectodermal cell | 4.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.08e-09 | 106 |
squamous cell carcinoma | 4.92e-09 | 14 |