FFCP PHASE1:Hg19::chr2:45171888..45171968,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:45171888..45171968,+ | |||
|coexpression_cluster_id=C573 | |coexpression_cluster_id=C573 | ||
|description=CAGE_peak_at_chr2:45171888..45171968,+ | |description=CAGE_peak_at_chr2:45171888..45171968,+ | ||
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|ontology_enrichment_celltype=CL:0002322!5.67e-08!5;CL:0000306!1.25e-07!4;CL:0002222!1.25e-07!4;CL:0002224!1.25e-07!4 | |ontology_enrichment_celltype=CL:0002322!5.67e-08!5;CL:0000306!1.25e-07!4;CL:0002222!1.25e-07!4;CL:0002224!1.25e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000306;7.57e-16;4!CL:0002222;7.57e-16;4!CL:0002224;7.57e-16;4!CL:0000064;6.38e-13;3!CL:0000067;6.38e-13;3!CL:0005012;6.38e-13;3!CL:0002304;6.38e-13;3!CL:0002586;8.76e-13;3!CL:0000149;1.08e-09;4!CL:0000075;5.12e-08;27!CL:0000333;2.67e-07;5!CL:0000147;6.93e-07;14 | |ontology_enrichment_celltype_v019=CL:0000306;7.57e-16;4!CL:0002222;7.57e-16;4!CL:0002224;7.57e-16;4!CL:0000064;6.38e-13;3!CL:0000067;6.38e-13;3!CL:0005012;6.38e-13;3!CL:0002304;6.38e-13;3!CL:0002586;8.76e-13;3!CL:0000149;1.08e-09;4!CL:0000075;5.12e-08;27!CL:0000333;2.67e-07;5!CL:0000147;6.93e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,9.75e-16,4;CL:0002222,9.75e-16,4;CL:0002224,9.75e-16,4;CL:0000064,6.79e-13,3;CL:0000067,6.79e-13,3;CL:0005012,6.79e-13,3;CL:0002304,6.79e-13,3;CL:0002586,1.01e-12,3;CL:0000149,1.20e-09,4;CL:0000075,5.31e-08,27;CL:0000147,6.85e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.11e-12;3!UBERON:0010122;9.93e-09;2 | |ontology_enrichment_development_v019=UBERON:0003056;1.11e-12;3!UBERON:0010122;9.93e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.44e-35!90;UBERON:0003075!2.13e-32!86;UBERON:0007284!2.13e-32!86;UBERON:0003056!7.31e-32!61;UBERON:0000073!1.55e-26!94;UBERON:0001016!1.55e-26!94;UBERON:0005743!2.42e-23!86;UBERON:0000924!1.01e-21!173;UBERON:0006601!1.01e-21!173;UBERON:0002616!3.64e-20!59;UBERON:0002780!4.95e-20!41;UBERON:0001890!4.95e-20!41;UBERON:0006240!4.95e-20!41;UBERON:0004121!7.80e-20!169;UBERON:0001049!1.23e-19!57;UBERON:0005068!1.23e-19!57;UBERON:0006241!1.23e-19!57;UBERON:0007135!1.23e-19!57;UBERON:0003080!2.29e-19!42;UBERON:0000955!2.44e-19!69;UBERON:0006238!2.44e-19!69;UBERON:0001017!3.50e-19!82;UBERON:0000033!9.31e-19!123;UBERON:0007625!1.02e-18!11;UBERON:0000153!3.33e-17!129;UBERON:0007811!3.33e-17!129;UBERON:0002104!1.85e-16!21;UBERON:0000970!3.54e-15!20;UBERON:0002020!4.44e-15!34;UBERON:0003528!4.44e-15!34;UBERON:0002791!2.49e-14!33;UBERON:0001032!8.58e-14!24;UBERON:0004456!8.58e-14!24;UBERON:0001893!9.59e-14!34;UBERON:0000019!9.98e-14!19;UBERON:0000047!9.98e-14!19;UBERON:0004088!9.98e-14!19;UBERON:0003072!9.98e-14!19;UBERON:0003071!9.98e-14!19;UBERON:0004128!9.98e-14!19;UBERON:0001869!2.30e-13!32;UBERON:0000020!1.29e-12!23;UBERON:0001456!4.90e-12!21;UBERON:0002420!1.38e-11!9;UBERON:0007245!1.38e-11!9;UBERON:0010009!1.38e-11!9;UBERON:0010011!1.38e-11!9;UBERON:0000454!1.38e-11!9;UBERON:0002308!5.80e-11!9;UBERON:0000125!5.80e-11!9;UBERON:0000966!1.23e-09!5;UBERON:0005388!1.23e-09!5;UBERON:0001802!1.23e-09!5;UBERON:0009663!5.45e-09!7;UBERON:0001894!8.67e-09!7;UBERON:0006222!8.67e-09!7;UBERON:0005085!9.57e-09!29;UBERON:0000488!4.57e-08!4;UBERON:0000369!9.43e-08!4;UBERON:0002435!9.43e-08!4;UBERON:0000204!9.43e-08!4;UBERON:0010082!9.43e-08!4;UBERON:0007023!9.76e-08!115;UBERON:0010077!1.25e-07!4;UBERON:0005389!1.25e-07!4;UBERON:0000484!1.25e-07!4;UBERON:0002546!1.25e-07!4;UBERON:0000965!1.25e-07!4;UBERON:0001803!1.25e-07!4;UBERON:0003073!1.25e-07!4;UBERON:0005426!1.25e-07!4;UBERON:0000956!1.52e-07!25;UBERON:0000203!1.52e-07!25;UBERON:0001801!3.64e-07!14;UBERON:0000064!9.26e-07!219 | |ontology_enrichment_uberon=UBERON:0002346!6.44e-35!90;UBERON:0003075!2.13e-32!86;UBERON:0007284!2.13e-32!86;UBERON:0003056!7.31e-32!61;UBERON:0000073!1.55e-26!94;UBERON:0001016!1.55e-26!94;UBERON:0005743!2.42e-23!86;UBERON:0000924!1.01e-21!173;UBERON:0006601!1.01e-21!173;UBERON:0002616!3.64e-20!59;UBERON:0002780!4.95e-20!41;UBERON:0001890!4.95e-20!41;UBERON:0006240!4.95e-20!41;UBERON:0004121!7.80e-20!169;UBERON:0001049!1.23e-19!57;UBERON:0005068!1.23e-19!57;UBERON:0006241!1.23e-19!57;UBERON:0007135!1.23e-19!57;UBERON:0003080!2.29e-19!42;UBERON:0000955!2.44e-19!69;UBERON:0006238!2.44e-19!69;UBERON:0001017!3.50e-19!82;UBERON:0000033!9.31e-19!123;UBERON:0007625!1.02e-18!11;UBERON:0000153!3.33e-17!129;UBERON:0007811!3.33e-17!129;UBERON:0002104!1.85e-16!21;UBERON:0000970!3.54e-15!20;UBERON:0002020!4.44e-15!34;UBERON:0003528!4.44e-15!34;UBERON:0002791!2.49e-14!33;UBERON:0001032!8.58e-14!24;UBERON:0004456!8.58e-14!24;UBERON:0001893!9.59e-14!34;UBERON:0000019!9.98e-14!19;UBERON:0000047!9.98e-14!19;UBERON:0004088!9.98e-14!19;UBERON:0003072!9.98e-14!19;UBERON:0003071!9.98e-14!19;UBERON:0004128!9.98e-14!19;UBERON:0001869!2.30e-13!32;UBERON:0000020!1.29e-12!23;UBERON:0001456!4.90e-12!21;UBERON:0002420!1.38e-11!9;UBERON:0007245!1.38e-11!9;UBERON:0010009!1.38e-11!9;UBERON:0010011!1.38e-11!9;UBERON:0000454!1.38e-11!9;UBERON:0002308!5.80e-11!9;UBERON:0000125!5.80e-11!9;UBERON:0000966!1.23e-09!5;UBERON:0005388!1.23e-09!5;UBERON:0001802!1.23e-09!5;UBERON:0009663!5.45e-09!7;UBERON:0001894!8.67e-09!7;UBERON:0006222!8.67e-09!7;UBERON:0005085!9.57e-09!29;UBERON:0000488!4.57e-08!4;UBERON:0000369!9.43e-08!4;UBERON:0002435!9.43e-08!4;UBERON:0000204!9.43e-08!4;UBERON:0010082!9.43e-08!4;UBERON:0007023!9.76e-08!115;UBERON:0010077!1.25e-07!4;UBERON:0005389!1.25e-07!4;UBERON:0000484!1.25e-07!4;UBERON:0002546!1.25e-07!4;UBERON:0000965!1.25e-07!4;UBERON:0001803!1.25e-07!4;UBERON:0003073!1.25e-07!4;UBERON:0005426!1.25e-07!4;UBERON:0000956!1.52e-07!25;UBERON:0000203!1.52e-07!25;UBERON:0001801!3.64e-07!14;UBERON:0000064!9.26e-07!219 | ||
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|short_description=p@chr2:45171888..45171968,+ | |short_description=p@chr2:45171888..45171968,+ | ||
}} | }} |
Latest revision as of 10:25, 29 July 2015
Short description: | p@chr2:45171888..45171968, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:45171888..45171968, + |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 9.75e-16 | 4 |
vertebrate lens cell | 9.75e-16 | 4 |
lens epithelial cell | 9.75e-16 | 4 |
ciliated cell | 6.79e-13 | 3 |
ciliated epithelial cell | 6.79e-13 | 3 |
multi-ciliated epithelial cell | 6.79e-13 | 3 |
non-pigmented ciliary epithelial cell | 6.79e-13 | 3 |
retinal pigment epithelial cell | 1.01e-12 | 3 |
visual pigment cell | 1.20e-09 | 4 |
columnar/cuboidal epithelial cell | 5.31e-08 | 27 |
pigment cell | 6.85e-07 | 14 |