FFCP PHASE1:Hg19::chr6:35360230..35360249,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:35360230..35360249,+ | |||
|coexpression_cluster_id=C3975 | |||
|description=CAGE_peak_at_chr6:35360230..35360249,+ | |||
|id=chr6:35360230..35360249,+ | |||
|ontology_enrichment_celltype=CL:0002368!1.39e-26!13;CL:0000066!7.17e-24!254;CL:0002076!1.16e-22!43;CL:0002202!7.62e-16!9;CL:0002632!7.62e-16!9;CL:0000223!4.44e-15!59;CL:0002159!8.95e-14!13;CL:0000244!9.12e-14!4;CL:0000731!9.12e-14!4;CL:0000068!4.09e-10!3;CL:0000069!4.09e-10!3;CL:0000307!4.09e-10!3;CL:0000377!4.09e-10!3;CL:0002621!1.87e-09!3;CL:0000240!3.17e-08!6;CL:0000311!3.17e-08!6;CL:0000079!3.17e-08!6;CL:0000237!3.17e-08!6;CL:0000036!3.17e-08!6;CL:0000357!3.17e-08!6;CL:0000114!3.17e-08!6;CL:0002327!2.57e-07!4;CL:0000575!3.83e-07!2;CL:0002077!4.02e-07!33;CL:1000415!9.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.80e-32;13!CL:0000244;5.91e-29;4!CL:0000731;5.91e-29;4!CL:0000307;3.94e-21;3!CL:0002202;7.21e-19;9!CL:0002632;7.21e-19;9!CL:0002159;3.25e-12;14!CL:0002166;4.30e-10;3!CL:0002076;7.21e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,9.26e-33,13;CL:0000244,2.83e-29,4;CL:0000731,2.83e-29,4;CL:0000068,5.80e-21,3;CL:0000069,5.80e-21,3;CL:0000307,5.80e-21,3;CL:0000377,5.80e-21,3;CL:0002202,6.86e-19,9;CL:0002632,6.86e-19,9;CL:0000066,5.91e-14,253;CL:0002159,5.70e-12,14;CL:0002076,8.38e-12,42;CL:0002166,8.55e-10,3;CL:0000223,3.63e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000377;3.94e-21;3 | |||
|ontology_enrichment_disease=DOID:3910!4.87e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.26e-12!169;UBERON:0000925!2.26e-12!169;UBERON:0006595!2.26e-12!169;UBERON:0005911!6.88e-12!82;UBERON:0000058!8.79e-12!26;UBERON:0006554!1.08e-11!44;UBERON:0001008!2.37e-11!45;UBERON:0000365!5.35e-11!5;UBERON:0002294!8.81e-11!7;UBERON:0001173!8.81e-11!7;UBERON:0004912!8.81e-11!7;UBERON:0007196!8.76e-10!14;UBERON:0001558!8.76e-10!14;UBERON:0001949!1.87e-09!3;UBERON:0005910!3.78e-09!6;UBERON:0002394!1.02e-07!4;UBERON:0003928!1.02e-07!4;UBERON:0001911!2.57e-07!4;UBERON:0005333!2.57e-07!4;UBERON:0008425!2.57e-07!4;UBERON:0005311!2.57e-07!4;UBERON:0003929!2.68e-07!54;UBERON:0005153!2.83e-07!37;UBERON:0004903!4.87e-07!2;UBERON:0002173!4.87e-07!2;UBERON:0002186!4.87e-07!2;UBERON:0005157!7.96e-07!51;UBERON:0001004!8.21e-07!72;UBERON:0001007!9.45e-07!155;UBERON:0001555!9.45e-07!155;UBERON:0007026!9.45e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.22e-23;5!UBERON:0005910;2.18e-19;6!UBERON:0000058;2.31e-11;10!UBERON:0007196;2.91e-11;15!UBERON:0001558;2.91e-11;15!UBERON:0000486;9.04e-10;12!UBERON:0002294;1.38e-09;7!UBERON:0001173;1.38e-09;7!UBERON:0003126;2.26e-09;7!UBERON:0001005;2.26e-09;7!UBERON:0004913;1.01e-08;1!UBERON:0003703;1.01e-08;1!UBERON:0001174;1.01e-08;1!UBERON:0004914;1.01e-08;1!UBERON:0001301;3.44e-08;1!UBERON:0002394;4.89e-08;4!UBERON:0003928;4.89e-08;4!UBERON:0006554;5.69e-08;30!UBERON:0001008;5.69e-08;30!UBERON:0000065;6.72e-08;44!UBERON:0001708;8.81e-08;4!UBERON:0008895;8.81e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.79e-23,5;UBERON:0005910,1.34e-19,6;UBERON:0007196,2.82e-11,15;UBERON:0001558,2.82e-11,15;UBERON:0003126,2.66e-09,7;UBERON:0001005,2.66e-09,7;UBERON:0004119,3.66e-09,160;UBERON:0000925,3.66e-09,160;UBERON:0006595,3.66e-09,160;UBERON:0000058,4.76e-09,19;UBERON:0004913,1.05e-08,1;UBERON:0003703,1.05e-08,1;UBERON:0001174,1.05e-08,1;UBERON:0004914,1.05e-08,1;UBERON:0006554,2.13e-08,47;UBERON:0001008,3.36e-08,48;UBERON:0001301,6.24e-08,1;UBERON:0002294,1.43e-07,9;UBERON:0001173,1.43e-07,9;UBERON:0004912,1.43e-07,9;UBERON:0001708,1.47e-07,4;UBERON:0008895,1.47e-07,4;UBERON:0000065,4.67e-07,54;UBERON:0005911,6.90e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,2.18577172975525,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,1.31700342490351,1.1240175325762,0.603173834469785,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,1.13420077793909,0.985143749731331,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.828728900423067,0,0,0,1.35359883872224,0.616122696835318,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,1.32227932288782,1.53752053892085,1.65896526242959,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,1.34060455107157,1.08890984861323,0,3.87454835404107,1.68471475667626,4.87773168890343,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0.47748896947538,0,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0,1.43789361835723,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,1.65412492502765,1.04836000945218,0,0,0,0,0,0,0,0,0,0,0.195551382734803,1.28254112402454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0,0,0,0,0,0,0,0,0,0,4.73139475894545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,2.11736923029415,0,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:35360230..35360249,+ | |||
}} |
Latest revision as of 01:00, 31 July 2015
Short description: | p@chr6:35360230..35360249, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35360230..35360249, + |
Coexpression cluster: | C3975_Urothelial_Keratinocyte_amniotic_Corneal_epidermoid_Prostate_papillotubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 9.26e-33 | 13 |
transitional epithelial cell | 2.83e-29 | 4 |
urothelial cell | 2.83e-29 | 4 |
duct epithelial cell | 5.80e-21 | 3 |
branched duct epithelial cell | 5.80e-21 | 3 |
tracheal epithelial cell | 5.80e-21 | 3 |
tracheoblast | 5.80e-21 | 3 |
epithelial cell of tracheobronchial tree | 6.86e-19 | 9 |
epithelial cell of lower respiratory tract | 6.86e-19 | 9 |
epithelial cell | 5.91e-14 | 253 |
general ecto-epithelial cell | 5.70e-12 | 14 |
endo-epithelial cell | 8.38e-12 | 42 |
epithelial cell of Malassez | 8.55e-10 | 3 |
endodermal cell | 3.63e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.79e-23 | 5 |
transitional epithelium | 1.34e-19 | 6 |
tracheobronchial tree | 2.82e-11 | 15 |
lower respiratory tract | 2.82e-11 | 15 |
trachea | 2.66e-09 | 7 |
respiratory airway | 2.66e-09 | 7 |
endoderm-derived structure | 3.66e-09 | 160 |
endoderm | 3.66e-09 | 160 |
presumptive endoderm | 3.66e-09 | 160 |
duct | 4.76e-09 | 19 |
hepatopancreatic ampulla | 1.05e-08 | 1 |
extrahepatic bile duct | 1.05e-08 | 1 |
common bile duct | 1.05e-08 | 1 |
duodenal papilla | 1.05e-08 | 1 |
urinary system structure | 2.13e-08 | 47 |
renal system | 3.36e-08 | 48 |
epididymis | 6.24e-08 | 1 |
biliary system | 1.43e-07 | 9 |
biliary tree | 1.43e-07 | 9 |
biliary bud | 1.43e-07 | 9 |
jaw skeleton | 1.47e-07 | 4 |
splanchnocranium | 1.47e-07 | 4 |
respiratory tract | 4.67e-07 | 54 |
endo-epithelium | 6.90e-07 | 82 |