FF:11526-119I5: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004967 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004967 | ||
|accession_numbers=CAGE;DRX008209;DRR009081;DRZ000506;DRZ001891;DRZ011856;DRZ013241 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037248;DRR041614;DRZ007256 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000970,UBERON:0000019,UBERON:0000033,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000047,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0010313,UBERON:0001062,UBERON:0000480,UBERON:0003102,UBERON:0000020,UBERON:0001032,UBERON:0010317,UBERON:0000964,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0002104,UBERON:0001801,UBERON:0010409,UBERON:0004456,UBERON:0001456,UBERON:0010230 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0002159,CL:0000255,CL:0002077,CL:0000575 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000043 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Corneal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11336.11526-119I5.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Corneal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11336.11526-119I5.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Corneal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11336.11526-119I5.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Corneal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11336.11526-119I5.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Corneal%2520Epithelial%2520Cells%252c%2520donor1.CNhs11336.11526-119I5.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11526-119I5 | |id=FF:11526-119I5 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000043 | ||
|is_obsolete= | |||
|library_id=CNhs11336 | |||
|library_id_phase_based=2:CNhs11336 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11526 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10015.TTAGGC.11526 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11526 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10015.TTAGGC.11526 | |||
|name=Corneal Epithelial Cells, donor1 | |name=Corneal Epithelial Cells, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs11336,LSID768,release014,COMPLETED | |profile_hcage=CNhs11336,LSID768,release014,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10015,,, | |profile_srnaseq=SRhi10015,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.230119145490984,0,-0.0396699910802233,-0.282403560576942,0,0,0,0,0,0,0,0,0.237692141113291,0,0.320745544819618,0,0,-0.0184146310861402,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.0856125757530365,0,0,0,0.450476428384029,0,0,0,0,-0.0242150211128343,0,0,0,0,0,0,0.134908379262287,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0165418935142457,0,0,0,0,0,0,-0.102095220883744,0,0,0,0.199894743854788,0.122199735520018,0,0,0,0,-0.0980353512377064,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.0504677806612008,0.244777256561814,0,0,0,0,0,0 | |||
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| |||
|rna_box=119 | |rna_box=119 | ||
|rna_catalog_number=SC6515 | |rna_catalog_number=SC6515 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=119I5 | |rna_tube_id=119I5 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10015.TTAGGC | |||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=lot:4976 | |sample_cell_catalog=lot:4976 | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.36954543540506e-216!GO:0005737;cytoplasm;2.35486540177156e-183!GO:0043226;organelle;4.10481342955526e-152!GO:0043229;intracellular organelle;1.11030296544181e-151!GO:0043231;intracellular membrane-bound organelle;1.13609964315545e-140!GO:0043227;membrane-bound organelle;2.00910794978768e-140!GO:0044444;cytoplasmic part;5.59860581908356e-123!GO:0044422;organelle part;1.22243623659259e-114!GO:0044446;intracellular organelle part;1.62088256674829e-113!GO:0032991;macromolecular complex;9.48027824724684e-71!GO:0005739;mitochondrion;8.68464944778062e-69!GO:0044237;cellular metabolic process;3.07840913576825e-67!GO:0030529;ribonucleoprotein complex;3.26378915977491e-67!GO:0044238;primary metabolic process;3.17082809932292e-66!GO:0005515;protein binding;5.36480864052705e-60!GO:0043170;macromolecule metabolic process;9.35626696710101e-55!GO:0043233;organelle lumen;3.90494627744793e-52!GO:0031974;membrane-enclosed lumen;3.90494627744793e-52!GO:0005840;ribosome;5.91383189039442e-50!GO:0009058;biosynthetic process;2.44553967281865e-48!GO:0006412;translation;1.08382961962778e-45!GO:0003735;structural constituent of ribosome;1.3264401291433e-45!GO:0044429;mitochondrial part;4.7489736989223e-45!GO:0044249;cellular biosynthetic process;5.42557317274992e-45!GO:0031090;organelle membrane;7.63610347960637e-45!GO:0003723;RNA binding;1.19582879294501e-44!GO:0019538;protein metabolic process;4.96346498438953e-44!GO:0044428;nuclear part;7.33571980042964e-43!GO:0005634;nucleus;9.55293144991882e-42!GO:0033279;ribosomal subunit;3.20179451629447e-39!GO:0044267;cellular protein metabolic process;2.00280494621102e-38!GO:0044260;cellular macromolecule metabolic process;2.53186588744362e-38!GO:0009059;macromolecule biosynthetic process;1.34630958144974e-37!GO:0016043;cellular component organization and biogenesis;1.13477368085836e-35!GO:0005829;cytosol;1.13477368085836e-35!GO:0043234;protein complex;3.17980590659001e-35!GO:0031967;organelle envelope;2.74932654948021e-34!GO:0031975;envelope;6.16536492986707e-34!GO:0043228;non-membrane-bound organelle;1.75842178186853e-32!GO:0043232;intracellular non-membrane-bound organelle;1.75842178186853e-32!GO:0015031;protein transport;1.26390065527954e-31!GO:0033036;macromolecule localization;2.52083406326285e-31!GO:0006396;RNA processing;3.68938202296454e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.34286046935276e-29!GO:0005740;mitochondrial envelope;1.37260642764246e-29!GO:0008104;protein localization;1.56467456308343e-29!GO:0045184;establishment of protein localization;5.78061662169177e-29!GO:0031981;nuclear lumen;3.25044843741875e-27!GO:0031966;mitochondrial membrane;3.27713840625155e-27!GO:0065003;macromolecular complex assembly;7.65400682177062e-27!GO:0006996;organelle organization and biogenesis;8.2002599354381e-26!GO:0019866;organelle inner membrane;8.43404405238803e-26!GO:0043283;biopolymer metabolic process;2.04730705860215e-25!GO:0005743;mitochondrial inner membrane;4.66990519536001e-25!GO:0044445;cytosolic part;1.01458491048449e-23!GO:0022607;cellular component assembly;1.15782420464722e-23!GO:0046907;intracellular transport;1.49517039448124e-23!GO:0016071;mRNA metabolic process;1.27816087831358e-22!GO:0006886;intracellular protein transport;1.64025959492096e-21!GO:0010467;gene expression;4.26315095474921e-21!GO:0006259;DNA metabolic process;5.7015913911982e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.22192881158917e-21!GO:0008380;RNA splicing;1.70135873191335e-20!GO:0015935;small ribosomal subunit;2.20668647559894e-20!GO:0015934;large ribosomal subunit;6.8191455553865e-20!GO:0006397;mRNA processing;2.73938537087324e-19!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.77749966950098e-19!GO:0031980;mitochondrial lumen;3.07084790896186e-19!GO:0005759;mitochondrial matrix;3.07084790896186e-19!GO:0006119;oxidative phosphorylation;1.71380179080516e-18!GO:0005783;endoplasmic reticulum;1.73272311628618e-18!GO:0044455;mitochondrial membrane part;4.27930005643174e-18!GO:0012505;endomembrane system;2.40313145880475e-16!GO:0048770;pigment granule;3.44489161736367e-16!GO:0042470;melanosome;3.44489161736367e-16!GO:0016874;ligase activity;6.75638559745961e-16!GO:0005654;nucleoplasm;7.95146477471862e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.38347069817674e-15!GO:0051186;cofactor metabolic process;2.48293898418238e-15!GO:0005681;spliceosome;3.03256884786581e-15!GO:0044432;endoplasmic reticulum part;4.4149356576055e-15!GO:0007049;cell cycle;6.44190323351741e-15!GO:0005746;mitochondrial respiratory chain;6.7588541918189e-15!GO:0008134;transcription factor binding;7.22700186032252e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.56279114302514e-15!GO:0012501;programmed cell death;1.1674582466713e-14!GO:0006915;apoptosis;1.88073030115665e-14!GO:0051641;cellular localization;2.09710816286569e-14!GO:0006457;protein folding;2.10166484258054e-14!GO:0051649;establishment of cellular localization;2.27499623094385e-14!GO:0005761;mitochondrial ribosome;1.69399740646182e-13!GO:0000313;organellar ribosome;1.69399740646182e-13!GO:0000166;nucleotide binding;1.69789844470433e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.00250606836442e-13!GO:0044451;nucleoplasm part;3.06184087624076e-13!GO:0050136;NADH dehydrogenase (quinone) activity;3.46261113929357e-13!GO:0003954;NADH dehydrogenase activity;3.46261113929357e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.46261113929357e-13!GO:0006605;protein targeting;3.98552111134843e-13!GO:0005794;Golgi apparatus;4.56421155718933e-13!GO:0008219;cell death;4.57913430881699e-13!GO:0016265;death;4.57913430881699e-13!GO:0005730;nucleolus;7.18959011440867e-13!GO:0043412;biopolymer modification;1.08896070274748e-12!GO:0044248;cellular catabolic process;2.12148038652929e-12!GO:0006732;coenzyme metabolic process;2.27403849039963e-12!GO:0016817;hydrolase activity, acting on acid anhydrides;2.46440531981975e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.71494752172583e-12!GO:0016462;pyrophosphatase activity;2.84118710949694e-12!GO:0022618;protein-RNA complex assembly;4.70820325278678e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.85039315628873e-12!GO:0044265;cellular macromolecule catabolic process;9.80642907742582e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.24160644219765e-11!GO:0042773;ATP synthesis coupled electron transport;1.24160644219765e-11!GO:0006464;protein modification process;1.2940343236655e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.37417004815239e-11!GO:0006512;ubiquitin cycle;1.37417004815239e-11!GO:0005789;endoplasmic reticulum membrane;1.4250801746037e-11!GO:0022402;cell cycle process;1.6259034642537e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.16426424608155e-11!GO:0045271;respiratory chain complex I;2.16426424608155e-11!GO:0005747;mitochondrial respiratory chain complex I;2.16426424608155e-11!GO:0017111;nucleoside-triphosphatase activity;2.41400578595861e-11!GO:0009055;electron carrier activity;2.63341678241984e-11!GO:0042981;regulation of apoptosis;4.20534861527627e-11!GO:0043067;regulation of programmed cell death;4.25452491681179e-11!GO:0000502;proteasome complex (sensu Eukaryota);5.77375799562639e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.54778206955111e-11!GO:0006325;establishment and/or maintenance of chromatin architecture;8.9298817023066e-11!GO:0009057;macromolecule catabolic process;1.02620735926678e-10!GO:0051082;unfolded protein binding;1.10651802108931e-10!GO:0043285;biopolymer catabolic process;2.15195168149562e-10!GO:0000278;mitotic cell cycle;2.64499948984159e-10!GO:0017076;purine nucleotide binding;4.40404517645401e-10!GO:0006323;DNA packaging;4.69459777015712e-10!GO:0051276;chromosome organization and biogenesis;5.48862677908635e-10!GO:0032553;ribonucleotide binding;6.12350414675039e-10!GO:0032555;purine ribonucleotide binding;6.12350414675039e-10!GO:0051188;cofactor biosynthetic process;6.38373003158436e-10!GO:0016491;oxidoreductase activity;1.06469495521726e-09!GO:0043687;post-translational protein modification;1.07743089496328e-09!GO:0051603;proteolysis involved in cellular protein catabolic process;1.12808925557022e-09!GO:0019941;modification-dependent protein catabolic process;1.51680370350579e-09!GO:0043632;modification-dependent macromolecule catabolic process;1.51680370350579e-09!GO:0003712;transcription cofactor activity;1.67594854667383e-09!GO:0044257;cellular protein catabolic process;2.08844821782753e-09!GO:0006511;ubiquitin-dependent protein catabolic process;2.32752638142694e-09!GO:0008135;translation factor activity, nucleic acid binding;2.81070454412351e-09!GO:0006461;protein complex assembly;3.70905288984128e-09!GO:0042254;ribosome biogenesis and assembly;4.7238463339314e-09!GO:0006974;response to DNA damage stimulus;7.20112833008906e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;7.75469797586092e-09!GO:0000375;RNA splicing, via transesterification reactions;7.75469797586092e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.75469797586092e-09!GO:0006163;purine nucleotide metabolic process;1.47604873660283e-08!GO:0030163;protein catabolic process;1.57090537885532e-08!GO:0006913;nucleocytoplasmic transport;1.66763775782953e-08!GO:0009259;ribonucleotide metabolic process;1.69121292059407e-08!GO:0048193;Golgi vesicle transport;1.73075962948898e-08!GO:0006399;tRNA metabolic process;2.34611867851076e-08!GO:0051169;nuclear transport;2.97758565913735e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.14320558985509e-08!GO:0051726;regulation of cell cycle;3.27843110583648e-08!GO:0000074;regulation of progression through cell cycle;3.27843110583648e-08!GO:0030554;adenyl nucleotide binding;4.04214729461784e-08!GO:0016740;transferase activity;4.21424209295213e-08!GO:0009056;catabolic process;4.39129370706305e-08!GO:0032559;adenyl ribonucleotide binding;4.39748237071088e-08!GO:0009150;purine ribonucleotide metabolic process;4.55024827255004e-08!GO:0005524;ATP binding;5.00021337396647e-08!GO:0006164;purine nucleotide biosynthetic process;5.04412267536868e-08!GO:0007005;mitochondrion organization and biogenesis;5.08611583602755e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.11703377361299e-08!GO:0044427;chromosomal part;7.69784359742432e-08!GO:0000785;chromatin;7.69784359742432e-08!GO:0005694;chromosome;7.73286317401275e-08!GO:0005793;ER-Golgi intermediate compartment;8.57064474664282e-08!GO:0017038;protein import;8.6805886522319e-08!GO:0048523;negative regulation of cellular process;8.80572285310427e-08!GO:0006333;chromatin assembly or disassembly;9.32503307306507e-08!GO:0005768;endosome;9.8190718305696e-08!GO:0009260;ribonucleotide biosynthetic process;1.00123841301775e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.25946562315328e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.52805379570147e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.55240598716224e-07!GO:0006413;translational initiation;1.82194018202561e-07!GO:0009108;coenzyme biosynthetic process;2.14901624199388e-07!GO:0016192;vesicle-mediated transport;2.16450572248816e-07!GO:0008639;small protein conjugating enzyme activity;2.52855477840103e-07!GO:0009141;nucleoside triphosphate metabolic process;2.72279661308744e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.73871488276642e-07!GO:0003743;translation initiation factor activity;2.86899204304456e-07!GO:0006281;DNA repair;2.92092178413705e-07!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.92506474550719e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.20280054000257e-07!GO:0006446;regulation of translational initiation;3.54624888024914e-07!GO:0006366;transcription from RNA polymerase II promoter;4.50349479887709e-07!GO:0065004;protein-DNA complex assembly;4.54683544679539e-07!GO:0004842;ubiquitin-protein ligase activity;4.55996449465643e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.18214464406754e-07!GO:0004812;aminoacyl-tRNA ligase activity;5.18214464406754e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.18214464406754e-07!GO:0006260;DNA replication;5.43303101005872e-07!GO:0022403;cell cycle phase;5.89937321565444e-07!GO:0009199;ribonucleoside triphosphate metabolic process;6.66221337635643e-07!GO:0019787;small conjugating protein ligase activity;6.66221337635643e-07!GO:0048519;negative regulation of biological process;6.77625246351352e-07!GO:0009117;nucleotide metabolic process;7.35514945072764e-07!GO:0043069;negative regulation of programmed cell death;8.28090880868973e-07!GO:0006916;anti-apoptosis;8.28090880868973e-07!GO:0009142;nucleoside triphosphate biosynthetic process;9.14156207365135e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.14156207365135e-07!GO:0031497;chromatin assembly;9.53743094651191e-07!GO:0009719;response to endogenous stimulus;9.62297788670078e-07!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.75879021255901e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.22988444966919e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.22988444966919e-06!GO:0043038;amino acid activation;1.2852523404592e-06!GO:0006418;tRNA aminoacylation for protein translation;1.2852523404592e-06!GO:0043039;tRNA aminoacylation;1.2852523404592e-06!GO:0043066;negative regulation of apoptosis;1.5300897333925e-06!GO:0016881;acid-amino acid ligase activity;1.58206450524564e-06!GO:0006334;nucleosome assembly;1.63001689510926e-06!GO:0015986;ATP synthesis coupled proton transport;1.69370424204984e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.69370424204984e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.72620687385542e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.72620687385542e-06!GO:0005635;nuclear envelope;1.77087451823126e-06!GO:0006364;rRNA processing;2.10525948875986e-06!GO:0048475;coated membrane;2.35962533193486e-06!GO:0030117;membrane coat;2.35962533193486e-06!GO:0048522;positive regulation of cellular process;2.42779500502326e-06!GO:0007067;mitosis;2.68391792570271e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.90112925549557e-06!GO:0000087;M phase of mitotic cell cycle;2.92310210018501e-06!GO:0003676;nucleic acid binding;2.99718979854399e-06!GO:0016070;RNA metabolic process;3.0851999898793e-06!GO:0016072;rRNA metabolic process;3.43865433136903e-06!GO:0016604;nuclear body;3.45055065142118e-06!GO:0044431;Golgi apparatus part;3.79622892513758e-06!GO:0016779;nucleotidyltransferase activity;4.02777641623301e-06!GO:0008565;protein transporter activity;4.0306020451779e-06!GO:0030120;vesicle coat;4.48688326134354e-06!GO:0030662;coated vesicle membrane;4.48688326134354e-06!GO:0003924;GTPase activity;5.44877496515313e-06!GO:0016568;chromatin modification;6.46759187817022e-06!GO:0031965;nuclear membrane;6.81183399219571e-06!GO:0009060;aerobic respiration;7.64372001098155e-06!GO:0006091;generation of precursor metabolites and energy;7.6990358873802e-06!GO:0045259;proton-transporting ATP synthase complex;8.79198885553198e-06!GO:0008610;lipid biosynthetic process;1.15487189430243e-05!GO:0051246;regulation of protein metabolic process;1.15905182098601e-05!GO:0005773;vacuole;1.31059071003445e-05!GO:0016787;hydrolase activity;1.39208351378949e-05!GO:0046034;ATP metabolic process;1.43690926701954e-05!GO:0006754;ATP biosynthetic process;1.8972079785918e-05!GO:0006753;nucleoside phosphate metabolic process;1.8972079785918e-05!GO:0008654;phospholipid biosynthetic process;2.00072565139379e-05!GO:0005762;mitochondrial large ribosomal subunit;2.10663160964176e-05!GO:0000315;organellar large ribosomal subunit;2.10663160964176e-05!GO:0044453;nuclear membrane part;2.37155475238612e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.37155475238612e-05!GO:0065002;intracellular protein transport across a membrane;2.63953667315204e-05!GO:0003714;transcription corepressor activity;2.87386842543814e-05!GO:0031252;leading edge;2.98493158971043e-05!GO:0019829;cation-transporting ATPase activity;3.1945578622385e-05!GO:0006752;group transfer coenzyme metabolic process;3.27264712831272e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.30461134116743e-05!GO:0042623;ATPase activity, coupled;3.57180627007187e-05!GO:0048518;positive regulation of biological process;4.05202388744461e-05!GO:0006793;phosphorus metabolic process;4.31575344247463e-05!GO:0006796;phosphate metabolic process;4.31575344247463e-05!GO:0043623;cellular protein complex assembly;5.36085155740842e-05!GO:0030176;integral to endoplasmic reticulum membrane;5.40854673353907e-05!GO:0051170;nuclear import;5.98859290219717e-05!GO:0016564;transcription repressor activity;6.04153188604852e-05!GO:0016469;proton-transporting two-sector ATPase complex;6.09651977071504e-05!GO:0042802;identical protein binding;6.09651977071504e-05!GO:0043065;positive regulation of apoptosis;6.31443705797846e-05!GO:0045333;cellular respiration;6.42187691399777e-05!GO:0065009;regulation of a molecular function;7.08925141766302e-05!GO:0051329;interphase of mitotic cell cycle;7.51282855662611e-05!GO:0043068;positive regulation of programmed cell death;7.51282855662611e-05!GO:0000139;Golgi membrane;7.54695907869755e-05!GO:0000323;lytic vacuole;7.7691257546095e-05!GO:0005764;lysosome;7.7691257546095e-05!GO:0019843;rRNA binding;8.16162815826736e-05!GO:0006082;organic acid metabolic process;8.9698402669083e-05!GO:0006606;protein import into nucleus;9.56160731627347e-05!GO:0032446;protein modification by small protein conjugation;9.56160731627347e-05!GO:0016567;protein ubiquitination;0.000103257330157234!GO:0019752;carboxylic acid metabolic process;0.000105791417385018!GO:0044440;endosomal part;0.000112437980642888!GO:0010008;endosome membrane;0.000112437980642888!GO:0045786;negative regulation of progression through cell cycle;0.000112464672907165!GO:0003697;single-stranded DNA binding;0.000112731860890352!GO:0016126;sterol biosynthetic process;0.000123425863245624!GO:0009967;positive regulation of signal transduction;0.000125428313678182!GO:0031324;negative regulation of cellular metabolic process;0.000128979722131726!GO:0005788;endoplasmic reticulum lumen;0.000130505756720941!GO:0000279;M phase;0.000131948943021307!GO:0051325;interphase;0.000131948943021307!GO:0005770;late endosome;0.000134747422038636!GO:0016887;ATPase activity;0.000134747422038636!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000135053579414069!GO:0045454;cell redox homeostasis;0.000137325938151245!GO:0016607;nuclear speck;0.00013837625961059!GO:0004298;threonine endopeptidase activity;0.000147817651967027!GO:0016310;phosphorylation;0.000207567439947915!GO:0003713;transcription coactivator activity;0.00021758539966537!GO:0006099;tricarboxylic acid cycle;0.000224622332237536!GO:0046356;acetyl-CoA catabolic process;0.000224622332237536!GO:0051427;hormone receptor binding;0.000224749975218718!GO:0016563;transcription activator activity;0.000240441921283557!GO:0006888;ER to Golgi vesicle-mediated transport;0.000241024880787976!GO:0005905;coated pit;0.000243432242145666!GO:0003899;DNA-directed RNA polymerase activity;0.000246736647991189!GO:0005643;nuclear pore;0.000248091044410863!GO:0051301;cell division;0.000259343293490085!GO:0007264;small GTPase mediated signal transduction;0.000260933869592547!GO:0006979;response to oxidative stress;0.000263816564736168!GO:0005667;transcription factor complex;0.000264716472126081!GO:0000786;nucleosome;0.000269685781470272!GO:0046474;glycerophospholipid biosynthetic process;0.000273716757778454!GO:0030118;clathrin coat;0.00029340231158044!GO:0000314;organellar small ribosomal subunit;0.000299167591196598!GO:0005763;mitochondrial small ribosomal subunit;0.000299167591196598!GO:0006084;acetyl-CoA metabolic process;0.000308353769267497!GO:0004386;helicase activity;0.00031531543296185!GO:0005525;GTP binding;0.000330553858754858!GO:0050794;regulation of cellular process;0.000368245855140946!GO:0019899;enzyme binding;0.000370755730424425!GO:0035257;nuclear hormone receptor binding;0.000392992345059543!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000398543565958314!GO:0000245;spliceosome assembly;0.000409579954414298!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000412909490806593!GO:0048468;cell development;0.000413691006921533!GO:0030119;AP-type membrane coat adaptor complex;0.000429215691603502!GO:0016853;isomerase activity;0.000453908031770819!GO:0009109;coenzyme catabolic process;0.00048786640734387!GO:0007243;protein kinase cascade;0.000491610644548246!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000524787651174308!GO:0051187;cofactor catabolic process;0.000550575183490992!GO:0030132;clathrin coat of coated pit;0.000590816599747402!GO:0033116;ER-Golgi intermediate compartment membrane;0.000619804285846437!GO:0030131;clathrin adaptor complex;0.000678046197414678!GO:0006917;induction of apoptosis;0.000759496328039938!GO:0015630;microtubule cytoskeleton;0.000849726786961537!GO:0006520;amino acid metabolic process;0.000884328101324029!GO:0008026;ATP-dependent helicase activity;0.00090221155479877!GO:0008632;apoptotic program;0.000914366796032776!GO:0006626;protein targeting to mitochondrion;0.000915001248562794!GO:0007006;mitochondrial membrane organization and biogenesis;0.000930602848134573!GO:0050662;coenzyme binding;0.000930602848134573!GO:0048037;cofactor binding;0.00101648346973719!GO:0008637;apoptotic mitochondrial changes;0.00105169454421232!GO:0012502;induction of programmed cell death;0.00108323070032628!GO:0046489;phosphoinositide biosynthetic process;0.00110955638595899!GO:0016023;cytoplasmic membrane-bound vesicle;0.00110955638595899!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00110955638595899!GO:0009165;nucleotide biosynthetic process;0.00112515561895485!GO:0043681;protein import into mitochondrion;0.00121997971196819!GO:0043566;structure-specific DNA binding;0.00122692537523564!GO:0009892;negative regulation of metabolic process;0.00124451447782519!GO:0046930;pore complex;0.00124962392532631!GO:0016481;negative regulation of transcription;0.00130440478805323!GO:0006695;cholesterol biosynthetic process;0.00130972423284591!GO:0008250;oligosaccharyl transferase complex;0.001368702428434!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00149549950837366!GO:0031988;membrane-bound vesicle;0.00155474432095255!GO:0016859;cis-trans isomerase activity;0.00162175371964557!GO:0019867;outer membrane;0.00173613862015782!GO:0005798;Golgi-associated vesicle;0.00176684821302827!GO:0006650;glycerophospholipid metabolic process;0.00181808754443236!GO:0006839;mitochondrial transport;0.00188304789270159!GO:0051789;response to protein stimulus;0.00188304789270159!GO:0006986;response to unfolded protein;0.00188304789270159!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00191625119294943!GO:0030031;cell projection biogenesis;0.00194001248054334!GO:0051920;peroxiredoxin activity;0.00195204047272347!GO:0030867;rough endoplasmic reticulum membrane;0.00198026436649401!GO:0031968;organelle outer membrane;0.00198895065218068!GO:0043488;regulation of mRNA stability;0.0019934653488096!GO:0043487;regulation of RNA stability;0.0019934653488096!GO:0044262;cellular carbohydrate metabolic process;0.00208215834294985!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00212113536018085!GO:0008652;amino acid biosynthetic process;0.00226732509672649!GO:0043021;ribonucleoprotein binding;0.0023310624731997!GO:0048471;perinuclear region of cytoplasm;0.00233448664890057!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00238575010420368!GO:0001726;ruffle;0.00238575010420368!GO:0016044;membrane organization and biogenesis;0.00246625532817519!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00267396979499205!GO:0030036;actin cytoskeleton organization and biogenesis;0.00275678170801019!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00277887100241327!GO:0030125;clathrin vesicle coat;0.00290278337299689!GO:0030665;clathrin coated vesicle membrane;0.00290278337299689!GO:0005741;mitochondrial outer membrane;0.00305363091422327!GO:0046467;membrane lipid biosynthetic process;0.00317759881516463!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00335030852564448!GO:0001836;release of cytochrome c from mitochondria;0.00340516608922346!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00370900787955719!GO:0005769;early endosome;0.00381005620597122!GO:0006118;electron transport;0.00390886875511448!GO:0008033;tRNA processing;0.00393124755060014!GO:0032561;guanyl ribonucleotide binding;0.00395101901724058!GO:0019001;guanyl nucleotide binding;0.00395101901724058!GO:0005813;centrosome;0.00401723495610195!GO:0008243;plasminogen activator activity;0.00408874501868572!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00413301693397465!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00413301693397465!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00413301693397465!GO:0031301;integral to organelle membrane;0.00446450039589225!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00446450039589225!GO:0050790;regulation of catalytic activity;0.0045676519347439!GO:0005885;Arp2/3 protein complex;0.00460110132007113!GO:0044255;cellular lipid metabolic process;0.00461325798350776!GO:0007398;ectoderm development;0.0047042169963904!GO:0006403;RNA localization;0.0047042169963904!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0047042169963904!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0047042169963904!GO:0046483;heterocycle metabolic process;0.00471287959120356!GO:0005048;signal sequence binding;0.00501468174340519!GO:0050657;nucleic acid transport;0.00501468174340519!GO:0051236;establishment of RNA localization;0.00501468174340519!GO:0050658;RNA transport;0.00501468174340519!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00515863127219145!GO:0006779;porphyrin biosynthetic process;0.00518045932950526!GO:0033014;tetrapyrrole biosynthetic process;0.00518045932950526!GO:0045941;positive regulation of transcription;0.00521074651765275!GO:0005791;rough endoplasmic reticulum;0.00524231452526683!GO:0018196;peptidyl-asparagine modification;0.00535352282968479!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00535352282968479!GO:0006595;polyamine metabolic process;0.00593127019709681!GO:0006778;porphyrin metabolic process;0.00616875646826359!GO:0033013;tetrapyrrole metabolic process;0.00616875646826359!GO:0006066;alcohol metabolic process;0.00631483319522418!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00631483319522418!GO:0015002;heme-copper terminal oxidase activity;0.00631483319522418!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00631483319522418!GO:0004129;cytochrome-c oxidase activity;0.00631483319522418!GO:0030133;transport vesicle;0.00640734084809869!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00685104922763649!GO:0016125;sterol metabolic process;0.00687904721889815!GO:0030384;phosphoinositide metabolic process;0.00693955007473934!GO:0045893;positive regulation of transcription, DNA-dependent;0.00693955007473934!GO:0005774;vacuolar membrane;0.00721538002579491!GO:0005684;U2-dependent spliceosome;0.00726805963478475!GO:0015980;energy derivation by oxidation of organic compounds;0.00728829887825636!GO:0017166;vinculin binding;0.00748365367434265!GO:0030658;transport vesicle membrane;0.00766184821543778!GO:0006402;mRNA catabolic process;0.00794725077437679!GO:0006414;translational elongation;0.00808283477551892!GO:0000151;ubiquitin ligase complex;0.00810604805708326!GO:0030216;keratinocyte differentiation;0.00810951295656767!GO:0051168;nuclear export;0.00818583908678591!GO:0005815;microtubule organizing center;0.00828306361461626!GO:0008361;regulation of cell size;0.00828306361461626!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.00850885542633555!GO:0045926;negative regulation of growth;0.00851258500962925!GO:0016049;cell growth;0.00858639464193986!GO:0031982;vesicle;0.00864523882813402!GO:0006506;GPI anchor biosynthetic process;0.00872954321667422!GO:0008092;cytoskeletal protein binding;0.00872954321667422!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00872954321667422!GO:0051252;regulation of RNA metabolic process;0.00891332550914471!GO:0008629;induction of apoptosis by intracellular signals;0.00891930875210803!GO:0006740;NADPH regeneration;0.00897601054674489!GO:0006098;pentose-phosphate shunt;0.00897601054674489!GO:0030880;RNA polymerase complex;0.00938198858986441!GO:0006644;phospholipid metabolic process;0.00947452447245781!GO:0031410;cytoplasmic vesicle;0.00958825068695745!GO:0051098;regulation of binding;0.00960966506512245!GO:0030029;actin filament-based process;0.010069777113085!GO:0007010;cytoskeleton organization and biogenesis;0.0103968883677716!GO:0006613;cotranslational protein targeting to membrane;0.0104355010241534!GO:0003684;damaged DNA binding;0.010463210064975!GO:0006643;membrane lipid metabolic process;0.0106828225782545!GO:0004576;oligosaccharyl transferase activity;0.0108576290226679!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0114345460124728!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0118504912307123!GO:0016272;prefoldin complex;0.011994475294116!GO:0031902;late endosome membrane;0.012208963748916!GO:0001533;cornified envelope;0.0122448907730468!GO:0051287;NAD binding;0.0122518525705681!GO:0051101;regulation of DNA binding;0.0123452700932266!GO:0006289;nucleotide-excision repair;0.0125351851327961!GO:0006505;GPI anchor metabolic process;0.0126243691801028!GO:0006733;oxidoreduction coenzyme metabolic process;0.0126265836162409!GO:0006950;response to stress;0.0126265836162409!GO:0006509;membrane protein ectodomain proteolysis;0.0128541683470959!GO:0033619;membrane protein proteolysis;0.0128541683470959!GO:0045892;negative regulation of transcription, DNA-dependent;0.0132988313123943!GO:0045334;clathrin-coated endocytic vesicle;0.0140183368114062!GO:0015992;proton transport;0.0140183368114062!GO:0043154;negative regulation of caspase activity;0.0142207738834256!GO:0006818;hydrogen transport;0.0143485043499494!GO:0006401;RNA catabolic process;0.0144042007400144!GO:0006749;glutathione metabolic process;0.0146576880045125!GO:0030660;Golgi-associated vesicle membrane;0.0146576880045125!GO:0050789;regulation of biological process;0.0146998704711417!GO:0006730;one-carbon compound metabolic process;0.0146998704711417!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0147648051017285!GO:0006783;heme biosynthetic process;0.0153216377853837!GO:0000049;tRNA binding;0.0153278546820508!GO:0005819;spindle;0.0154222141124246!GO:0015631;tubulin binding;0.0154793414863132!GO:0006519;amino acid and derivative metabolic process;0.01565006459142!GO:0048487;beta-tubulin binding;0.0159841789132063!GO:0008544;epidermis development;0.0161565859321082!GO:0044437;vacuolar part;0.0161615742938037!GO:0001558;regulation of cell growth;0.016599541396052!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.0166251387709452!GO:0022890;inorganic cation transmembrane transporter activity;0.0168375296116839!GO:0045792;negative regulation of cell size;0.0168401876746771!GO:0046822;regulation of nucleocytoplasmic transport;0.0169155330529398!GO:0007242;intracellular signaling cascade;0.0169171133946823!GO:0030128;clathrin coat of endocytic vesicle;0.0169475089468616!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0169475089468616!GO:0030122;AP-2 adaptor complex;0.0169475089468616!GO:0000096;sulfur amino acid metabolic process;0.017209379194616!GO:0005149;interleukin-1 receptor binding;0.017209379194616!GO:0042168;heme metabolic process;0.0173551068551058!GO:0030308;negative regulation of cell growth;0.0176377873793682!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0183735623830651!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0189104353258468!GO:0000428;DNA-directed RNA polymerase complex;0.0189104353258468!GO:0009116;nucleoside metabolic process;0.0192533466677197!GO:0005765;lysosomal membrane;0.0195075196994845!GO:0043284;biopolymer biosynthetic process;0.0195430381923137!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0195922020896829!GO:0006807;nitrogen compound metabolic process;0.0209186697586555!GO:0031272;regulation of pseudopodium formation;0.0209186697586555!GO:0031269;pseudopodium formation;0.0209186697586555!GO:0031344;regulation of cell projection organization and biogenesis;0.0209186697586555!GO:0031268;pseudopodium organization and biogenesis;0.0209186697586555!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0209186697586555!GO:0031274;positive regulation of pseudopodium formation;0.0209186697586555!GO:0005856;cytoskeleton;0.0209722156571225!GO:0030027;lamellipodium;0.0209722156571225!GO:0005657;replication fork;0.0212279350364769!GO:0030503;regulation of cell redox homeostasis;0.0214702623417552!GO:0019318;hexose metabolic process;0.0222452334336165!GO:0004674;protein serine/threonine kinase activity;0.0222733561639981!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0224417160286204!GO:0008625;induction of apoptosis via death domain receptors;0.0224900453706028!GO:0006612;protein targeting to membrane;0.0229818659633939!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0229818659633939!GO:0010257;NADH dehydrogenase complex assembly;0.0229818659633939!GO:0033108;mitochondrial respiratory chain complex assembly;0.0229818659633939!GO:0031529;ruffle organization and biogenesis;0.0234044912986586!GO:0006458;'de novo' protein folding;0.0234314810576456!GO:0051084;'de novo' posttranslational protein folding;0.0234314810576456!GO:0006633;fatty acid biosynthetic process;0.0238143684776597!GO:0007346;regulation of progression through mitotic cell cycle;0.0238281249543539!GO:0006261;DNA-dependent DNA replication;0.0238385950552967!GO:0006354;RNA elongation;0.0238533984688247!GO:0009112;nucleobase metabolic process;0.0241434166450141!GO:0000082;G1/S transition of mitotic cell cycle;0.0241700779545905!GO:0006629;lipid metabolic process;0.0242251359739457!GO:0030145;manganese ion binding;0.0244337088716485!GO:0005996;monosaccharide metabolic process;0.0245149154997678!GO:0009166;nucleotide catabolic process;0.0249186696606731!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0251243898615981!GO:0008213;protein amino acid alkylation;0.0252569949514118!GO:0006479;protein amino acid methylation;0.0252569949514118!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0257785209163858!GO:0031072;heat shock protein binding;0.0263239698978314!GO:0044452;nucleolar part;0.0270471719374848!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0270762611799806!GO:0040029;regulation of gene expression, epigenetic;0.0273270773871615!GO:0008538;proteasome activator activity;0.0275854097645045!GO:0006767;water-soluble vitamin metabolic process;0.0275854097645045!GO:0008283;cell proliferation;0.0275854097645045!GO:0003729;mRNA binding;0.0275854097645045!GO:0007265;Ras protein signal transduction;0.0281896285666887!GO:0007088;regulation of mitosis;0.0282992062623481!GO:0035035;histone acetyltransferase binding;0.0294085409267197!GO:0004680;casein kinase activity;0.0294085409267197!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0294085409267197!GO:0015399;primary active transmembrane transporter activity;0.0294085409267197!GO:0051028;mRNA transport;0.0298305272347092!GO:0006739;NADP metabolic process;0.0304680646226907!GO:0051087;chaperone binding;0.0306263866478903!GO:0030433;ER-associated protein catabolic process;0.0310561229031866!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0310561229031866!GO:0006383;transcription from RNA polymerase III promoter;0.031200396922218!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.031356550952861!GO:0009119;ribonucleoside metabolic process;0.0314761935564594!GO:0016653;oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor;0.0320186495339391!GO:0055092;sterol homeostasis;0.0320856041988998!GO:0042632;cholesterol homeostasis;0.0320856041988998!GO:0006007;glucose catabolic process;0.0323298982357275!GO:0003724;RNA helicase activity;0.0333030850479257!GO:0035258;steroid hormone receptor binding;0.0333585786038604!GO:0051540;metal cluster binding;0.0336929169654123!GO:0051536;iron-sulfur cluster binding;0.0336929169654123!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0338523504564283!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.034248364056142!GO:0043414;biopolymer methylation;0.034248364056142!GO:0006497;protein amino acid lipidation;0.0349080290170696!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0351700965887167!GO:0008047;enzyme activator activity;0.0355740015804365!GO:0016717;oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water;0.0361154105955151!GO:0000086;G2/M transition of mitotic cell cycle;0.0365316139616262!GO:0008139;nuclear localization sequence binding;0.0366803049529624!GO:0003756;protein disulfide isomerase activity;0.0368401719772029!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0368401719772029!GO:0040008;regulation of growth;0.0371232585186179!GO:0051085;chaperone cofactor-dependent protein folding;0.0374329636897608!GO:0005869;dynactin complex;0.0378546899141096!GO:0008094;DNA-dependent ATPase activity;0.0378546899141096!GO:0051348;negative regulation of transferase activity;0.0378590321371684!GO:0033673;negative regulation of kinase activity;0.0380531405409881!GO:0006469;negative regulation of protein kinase activity;0.0380531405409881!GO:0009303;rRNA transcription;0.0381235892411557!GO:0042158;lipoprotein biosynthetic process;0.0387190276665854!GO:0009308;amine metabolic process;0.0387581345152173!GO:0031300;intrinsic to organelle membrane;0.039500233398567!GO:0045806;negative regulation of endocytosis;0.040088295246595!GO:0016569;covalent chromatin modification;0.0404533483711636!GO:0003682;chromatin binding;0.0406736555865802!GO:0006611;protein export from nucleus;0.0411783072825561!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0411783072825561!GO:0019206;nucleoside kinase activity;0.0413136098767706!GO:0009110;vitamin biosynthetic process;0.0415141469864236!GO:0006220;pyrimidine nucleotide metabolic process;0.0419093796328781!GO:0046966;thyroid hormone receptor binding;0.0419127123487099!GO:0003711;transcription elongation regulator activity;0.042023317859624!GO:0009966;regulation of signal transduction;0.042023317859624!GO:0051338;regulation of transferase activity;0.0420723085006897!GO:0046394;carboxylic acid biosynthetic process;0.0422155059346649!GO:0016053;organic acid biosynthetic process;0.0422155059346649!GO:0005862;muscle thin filament tropomyosin;0.0423136958347724!GO:0030663;COPI coated vesicle membrane;0.0426725053199632!GO:0030126;COPI vesicle coat;0.0426725053199632!GO:0008426;protein kinase C inhibitor activity;0.0432258448018955!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0433741360685357!GO:0003678;DNA helicase activity;0.0436318526746663!GO:0051059;NF-kappaB binding;0.0438406736434474!GO:0007050;cell cycle arrest;0.043901526482517!GO:0016197;endosome transport;0.043901526482517!GO:0006769;nicotinamide metabolic process;0.0440282009779029!GO:0032508;DNA duplex unwinding;0.0441972628622083!GO:0032392;DNA geometric change;0.0441972628622083!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0453049621646635!GO:0030833;regulation of actin filament polymerization;0.0458682724176621!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0465762669714028!GO:0008186;RNA-dependent ATPase activity;0.0465762669714028!GO:0000123;histone acetyltransferase complex;0.047341161296399!GO:0016783;sulfurtransferase activity;0.0486936957253404!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0487695198863303!GO:0032507;maintenance of cellular protein localization;0.0488939321364407!GO:0009124;nucleoside monophosphate biosynthetic process;0.0490938813078727!GO:0009123;nucleoside monophosphate metabolic process;0.0490938813078727!GO:0045936;negative regulation of phosphate metabolic process;0.0495179313960481!GO:0016835;carbon-oxygen lyase activity;0.0499421394759347 | |||
|sample_id=11526 | |sample_id=11526 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=eye | |sample_tissue=eye | ||
|top_motifs=TP53:2.68326213805;ZEB1:2.19300268739;SNAI1..3:2.15947607375;ZNF148:2.04061840943;PPARG:2.01223530177;ZNF423:1.96136339218;TBX4,5:1.85953521923;XCPE1{core}:1.76436795837;TFCP2:1.76013141919;VSX1,2:1.7299379255;MYOD1:1.59970709659;GTF2A1,2:1.52853036296;LMO2:1.41556959287;HAND1,2:1.3458296538;NR5A1,2:1.33095135429;SP1:1.30000391173;EBF1:1.15220673686;TBP:1.0709188608;bHLH_family:0.967096639838;GLI1..3:0.938824376651;NANOG:0.929585687428;POU2F1..3:0.91136579882;TFAP2{A,C}:0.880243153588;NKX2-3_NKX2-5:0.85773664528;LHX3,4:0.826023816532;TEAD1:0.820655751984;FOXM1:0.768562051656;POU1F1:0.76428639766;ADNP_IRX_SIX_ZHX:0.740784163374;TLX1..3_NFIC{dimer}:0.726774711413;ONECUT1,2:0.705410159023;ZIC1..3:0.70027487505;RXRA_VDR{dimer}:0.690679667277;CEBPA,B_DDIT3:0.656239718076;FOS_FOS{B,L1}_JUN{B,D}:0.642792080114;IKZF1:0.579935500595;RREB1:0.563926283949;ZNF238:0.516789078726;STAT5{A,B}:0.466495723551;PAX1,9:0.451373637132;MTF1:0.436764760089;BACH2:0.395396420943;NFIL3:0.378773268047;ZBTB6:0.360653635719;FOSL2:0.360292319732;CRX:0.334109755465;POU5F1:0.330935295892;EP300:0.313354915553;NFE2:0.267806504918;GZF1:0.253019302683;TFAP4:0.232330121257;RBPJ:0.226216281469;REST:0.206352736635;HOX{A6,A7,B6,B7}:0.206246343349;HES1:0.19117920817;POU6F1:0.174621598394;SMAD1..7,9:0.164628552074;T:0.160697024754;AR:0.149586187433;GCM1,2:0.12539715724;HOX{A5,B5}:0.110588704281;LEF1_TCF7_TCF7L1,2:0.0977620028491;HIC1:0.0705025506609;SOX{8,9,10}:0.0623928500008;HLF:0.060319538388;GFI1B:0.0329326128521;HNF1A:0.0233097032275;NR1H4:0.0121313402613;ARID5B:0.00205660749715;NFKB1_REL_RELA:0.00103345723015;PAX8:-0.0111619592831;NR6A1:-0.0131472319372;TEF:-0.028232286176;TFAP2B:-0.0291545116033;ESR1:-0.0338706727616;TOPORS:-0.044185121552;ESRRA:-0.066676858842;PBX1:-0.0809097382376;GTF2I:-0.0862869304794;HNF4A_NR2F1,2:-0.0995394706005;SPZ1:-0.108536726347;MAZ:-0.124268160655;FOXQ1:-0.158198025939;OCT4_SOX2{dimer}:-0.172322299552;GFI1:-0.187783955371;GATA6:-0.192303616504;CDC5L:-0.196729257423;KLF4:-0.19906630659;SOX2:-0.202246520611;PAX5:-0.215221591747;NFY{A,B,C}:-0.231342062376;NKX3-2:-0.232419819015;FOXL1:-0.242011272168;SOX17:-0.269024419407;PDX1:-0.290264576557;RXR{A,B,G}:-0.293930957636;STAT2,4,6:-0.300078181807;FOX{F1,F2,J1}:-0.306724309816;CUX2:-0.312577367709;NKX2-2,8:-0.32592082331;NFE2L2:-0.33628733853;MED-1{core}:-0.345268270284;HOX{A4,D4}:-0.34654756377;ATF2:-0.346719361219;RFX1:-0.356947373674;PITX1..3:-0.373619628531;E2F1..5:-0.37657085222;IRF7:-0.382889596004;MEF2{A,B,C,D}:-0.401109634471;JUN:-0.402467533655;ETS1,2:-0.411662076432;RUNX1..3:-0.433848831771;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.435235407506;ZNF143:-0.444068034562;SRF:-0.451403876382;NKX2-1,4:-0.457155081357;ZNF384:-0.465966931894;POU3F1..4:-0.467151751278;UFEwm:-0.476363426049;TAL1_TCF{3,4,12}:-0.524312568974;YY1:-0.52932666384;SPIB:-0.534039358422;NHLH1,2:-0.543208450661;RORA:-0.570566796567;NR3C1:-0.583923159682;HIF1A:-0.589446107772;HMX1:-0.667461468533;SPI1:-0.669574559939;MYFfamily:-0.675180362466;PAX2:-0.687710002328;NFE2L1:-0.688562143711;MYBL2:-0.713422072931;ALX4:-0.72169177296;TFDP1:-0.738679286655;MTE{core}:-0.743857659584;PATZ1:-0.754245695446;PAX4:-0.755489371033;NKX3-1:-0.757796233333;ATF4:-0.772075733449;TLX2:-0.783840040893;FOXA2:-0.789497609771;FOX{I1,J2}:-0.799081021405;PAX3,7:-0.800725345207;PRRX1,2:-0.805271087445;FOX{D1,D2}:-0.813410520536;PRDM1:-0.815898245141;DBP:-0.821076169827;MAFB:-0.843850543371;ZFP161:-0.845061830127;RFX2..5_RFXANK_RFXAP:-0.905485127533;NRF1:-0.945549317051;HSF1,2:-0.952796812263;NFATC1..3:-0.957735149195;TGIF1:-0.974270601751;MYB:-0.980063432772;HOXA9_MEIS1:-0.985267124598;ELF1,2,4:-0.985780834125;EGR1..3:-0.998648527401;SOX5:-1.01859241321;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.03287701511;MZF1:-1.04688221466;FOXO1,3,4:-1.0791025541;ELK1,4_GABP{A,B1}:-1.08604428444;AHR_ARNT_ARNT2:-1.09132297418;IRF1,2:-1.09270206894;BREu{core}:-1.09608026452;PAX6:-1.12067424524;HBP1_HMGB_SSRP1_UBTF:-1.13516403507;FOXN1:-1.14320937453;ATF5_CREB3:-1.18219965197;EN1,2:-1.19556533804;EVI1:-1.19865753737;CREB1:-1.2851634001;FOXP1:-1.31056303739;FOXP3:-1.33556893918;NFIX:-1.34708664252;ALX1:-1.35270436417;NKX6-1,2:-1.35391083422;FOXD3:-1.36332465274;AIRE:-1.42935380873;ATF6:-1.43546002298;XBP1:-1.44511362849;BPTF:-1.51047892927;DMAP1_NCOR{1,2}_SMARC:-1.51614905529;CDX1,2,4:-1.52473750983;GATA4:-1.53111387154;NANOG{mouse}:-1.68859199389;SREBF1,2:-1.74442511701;ZBTB16:-1.79819176757;IKZF2:-2.03678711701;HMGA1,2:-2.05777037662;STAT1,3:-2.10670877001 | |top_motifs=TP53:2.68326213805;ZEB1:2.19300268739;SNAI1..3:2.15947607375;ZNF148:2.04061840943;PPARG:2.01223530177;ZNF423:1.96136339218;TBX4,5:1.85953521923;XCPE1{core}:1.76436795837;TFCP2:1.76013141919;VSX1,2:1.7299379255;MYOD1:1.59970709659;GTF2A1,2:1.52853036296;LMO2:1.41556959287;HAND1,2:1.3458296538;NR5A1,2:1.33095135429;SP1:1.30000391173;EBF1:1.15220673686;TBP:1.0709188608;bHLH_family:0.967096639838;GLI1..3:0.938824376651;NANOG:0.929585687428;POU2F1..3:0.91136579882;TFAP2{A,C}:0.880243153588;NKX2-3_NKX2-5:0.85773664528;LHX3,4:0.826023816532;TEAD1:0.820655751984;FOXM1:0.768562051656;POU1F1:0.76428639766;ADNP_IRX_SIX_ZHX:0.740784163374;TLX1..3_NFIC{dimer}:0.726774711413;ONECUT1,2:0.705410159023;ZIC1..3:0.70027487505;RXRA_VDR{dimer}:0.690679667277;CEBPA,B_DDIT3:0.656239718076;FOS_FOS{B,L1}_JUN{B,D}:0.642792080114;IKZF1:0.579935500595;RREB1:0.563926283949;ZNF238:0.516789078726;STAT5{A,B}:0.466495723551;PAX1,9:0.451373637132;MTF1:0.436764760089;BACH2:0.395396420943;NFIL3:0.378773268047;ZBTB6:0.360653635719;FOSL2:0.360292319732;CRX:0.334109755465;POU5F1:0.330935295892;EP300:0.313354915553;NFE2:0.267806504918;GZF1:0.253019302683;TFAP4:0.232330121257;RBPJ:0.226216281469;REST:0.206352736635;HOX{A6,A7,B6,B7}:0.206246343349;HES1:0.19117920817;POU6F1:0.174621598394;SMAD1..7,9:0.164628552074;T:0.160697024754;AR:0.149586187433;GCM1,2:0.12539715724;HOX{A5,B5}:0.110588704281;LEF1_TCF7_TCF7L1,2:0.0977620028491;HIC1:0.0705025506609;SOX{8,9,10}:0.0623928500008;HLF:0.060319538388;GFI1B:0.0329326128521;HNF1A:0.0233097032275;NR1H4:0.0121313402613;ARID5B:0.00205660749715;NFKB1_REL_RELA:0.00103345723015;PAX8:-0.0111619592831;NR6A1:-0.0131472319372;TEF:-0.028232286176;TFAP2B:-0.0291545116033;ESR1:-0.0338706727616;TOPORS:-0.044185121552;ESRRA:-0.066676858842;PBX1:-0.0809097382376;GTF2I:-0.0862869304794;HNF4A_NR2F1,2:-0.0995394706005;SPZ1:-0.108536726347;MAZ:-0.124268160655;FOXQ1:-0.158198025939;OCT4_SOX2{dimer}:-0.172322299552;GFI1:-0.187783955371;GATA6:-0.192303616504;CDC5L:-0.196729257423;KLF4:-0.19906630659;SOX2:-0.202246520611;PAX5:-0.215221591747;NFY{A,B,C}:-0.231342062376;NKX3-2:-0.232419819015;FOXL1:-0.242011272168;SOX17:-0.269024419407;PDX1:-0.290264576557;RXR{A,B,G}:-0.293930957636;STAT2,4,6:-0.300078181807;FOX{F1,F2,J1}:-0.306724309816;CUX2:-0.312577367709;NKX2-2,8:-0.32592082331;NFE2L2:-0.33628733853;MED-1{core}:-0.345268270284;HOX{A4,D4}:-0.34654756377;ATF2:-0.346719361219;RFX1:-0.356947373674;PITX1..3:-0.373619628531;E2F1..5:-0.37657085222;IRF7:-0.382889596004;MEF2{A,B,C,D}:-0.401109634471;JUN:-0.402467533655;ETS1,2:-0.411662076432;RUNX1..3:-0.433848831771;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.435235407506;ZNF143:-0.444068034562;SRF:-0.451403876382;NKX2-1,4:-0.457155081357;ZNF384:-0.465966931894;POU3F1..4:-0.467151751278;UFEwm:-0.476363426049;TAL1_TCF{3,4,12}:-0.524312568974;YY1:-0.52932666384;SPIB:-0.534039358422;NHLH1,2:-0.543208450661;RORA:-0.570566796567;NR3C1:-0.583923159682;HIF1A:-0.589446107772;HMX1:-0.667461468533;SPI1:-0.669574559939;MYFfamily:-0.675180362466;PAX2:-0.687710002328;NFE2L1:-0.688562143711;MYBL2:-0.713422072931;ALX4:-0.72169177296;TFDP1:-0.738679286655;MTE{core}:-0.743857659584;PATZ1:-0.754245695446;PAX4:-0.755489371033;NKX3-1:-0.757796233333;ATF4:-0.772075733449;TLX2:-0.783840040893;FOXA2:-0.789497609771;FOX{I1,J2}:-0.799081021405;PAX3,7:-0.800725345207;PRRX1,2:-0.805271087445;FOX{D1,D2}:-0.813410520536;PRDM1:-0.815898245141;DBP:-0.821076169827;MAFB:-0.843850543371;ZFP161:-0.845061830127;RFX2..5_RFXANK_RFXAP:-0.905485127533;NRF1:-0.945549317051;HSF1,2:-0.952796812263;NFATC1..3:-0.957735149195;TGIF1:-0.974270601751;MYB:-0.980063432772;HOXA9_MEIS1:-0.985267124598;ELF1,2,4:-0.985780834125;EGR1..3:-0.998648527401;SOX5:-1.01859241321;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.03287701511;MZF1:-1.04688221466;FOXO1,3,4:-1.0791025541;ELK1,4_GABP{A,B1}:-1.08604428444;AHR_ARNT_ARNT2:-1.09132297418;IRF1,2:-1.09270206894;BREu{core}:-1.09608026452;PAX6:-1.12067424524;HBP1_HMGB_SSRP1_UBTF:-1.13516403507;FOXN1:-1.14320937453;ATF5_CREB3:-1.18219965197;EN1,2:-1.19556533804;EVI1:-1.19865753737;CREB1:-1.2851634001;FOXP1:-1.31056303739;FOXP3:-1.33556893918;NFIX:-1.34708664252;ALX1:-1.35270436417;NKX6-1,2:-1.35391083422;FOXD3:-1.36332465274;AIRE:-1.42935380873;ATF6:-1.43546002298;XBP1:-1.44511362849;BPTF:-1.51047892927;DMAP1_NCOR{1,2}_SMARC:-1.51614905529;CDX1,2,4:-1.52473750983;GATA4:-1.53111387154;NANOG{mouse}:-1.68859199389;SREBF1,2:-1.74442511701;ZBTB16:-1.79819176757;IKZF2:-2.03678711701;HMGA1,2:-2.05777037662;STAT1,3:-2.10670877001 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11526-119I5;search_select_hide=table117:FF:11526-119I5 | |||
}} | }} | ||
Latest revision as of 18:06, 4 June 2020
| Name: | Corneal Epithelial Cells, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs11336 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11336
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11336
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.537 |
| 10 | 10 | 0.456 |
| 100 | 100 | 0.827 |
| 101 | 101 | 0.174 |
| 102 | 102 | 0.313 |
| 103 | 103 | 0.313 |
| 104 | 104 | 0.465 |
| 105 | 105 | 0.00903 |
| 106 | 106 | 0.0494 |
| 107 | 107 | 0.0286 |
| 108 | 108 | 0.372 |
| 109 | 109 | 0.0206 |
| 11 | 11 | 0.141 |
| 110 | 110 | 0.166 |
| 111 | 111 | 0.599 |
| 112 | 112 | 0.353 |
| 113 | 113 | 0.536 |
| 114 | 114 | 0.438 |
| 115 | 115 | 0.503 |
| 116 | 116 | 0.396 |
| 117 | 117 | 0.762 |
| 118 | 118 | 0.663 |
| 119 | 119 | 0.124 |
| 12 | 12 | 0.212 |
| 120 | 120 | 0.438 |
| 121 | 121 | 0.266 |
| 122 | 122 | 0.0479 |
| 123 | 123 | 0.593 |
| 124 | 124 | 0.852 |
| 125 | 125 | 0.566 |
| 126 | 126 | 0.599 |
| 127 | 127 | 0.107 |
| 128 | 128 | 0.187 |
| 129 | 129 | 0.0104 |
| 13 | 13 | 0.113 |
| 130 | 130 | 0.547 |
| 131 | 131 | 0.466 |
| 132 | 132 | 0.154 |
| 133 | 133 | 0.0133 |
| 134 | 134 | 0.873 |
| 135 | 135 | 0.77 |
| 136 | 136 | 0.806 |
| 137 | 137 | 0.444 |
| 138 | 138 | 0.839 |
| 139 | 139 | 0.8 |
| 14 | 14 | 0.522 |
| 140 | 140 | 0.855 |
| 141 | 141 | 0.745 |
| 142 | 142 | 0.175 |
| 143 | 143 | 0.812 |
| 144 | 144 | 0.753 |
| 145 | 145 | 0.164 |
| 146 | 146 | 0.029 |
| 147 | 147 | 0.169 |
| 148 | 148 | 0.29 |
| 149 | 149 | 0.331 |
| 15 | 15 | 0.793 |
| 150 | 150 | 0.328 |
| 151 | 151 | 0.37 |
| 152 | 152 | 0.0957 |
| 153 | 153 | 0.993 |
| 154 | 154 | 0.659 |
| 155 | 155 | 0.668 |
| 156 | 156 | 0.111 |
| 157 | 157 | 0.215 |
| 158 | 158 | 0.582 |
| 159 | 159 | 0.98 |
| 16 | 16 | 0.127 |
| 160 | 160 | 0.0318 |
| 161 | 161 | 0.251 |
| 162 | 162 | 0.345 |
| 163 | 163 | 0.645 |
| 164 | 164 | 0.894 |
| 165 | 165 | 0.474 |
| 166 | 166 | 0.413 |
| 167 | 167 | 0.0996 |
| 168 | 168 | 0.661 |
| 169 | 169 | 0.0782 |
| 17 | 17 | 0.127 |
| 18 | 18 | 0.104 |
| 19 | 19 | 0.425 |
| 2 | 2 | 0.105 |
| 20 | 20 | 0.633 |
| 21 | 21 | 0.843 |
| 22 | 22 | 0.154 |
| 23 | 23 | 0.215 |
| 24 | 24 | 0.177 |
| 25 | 25 | 0.947 |
| 26 | 26 | 0.184 |
| 27 | 27 | 0.277 |
| 28 | 28 | 0.922 |
| 29 | 29 | 0.719 |
| 3 | 3 | 0.484 |
| 30 | 30 | 0.111 |
| 31 | 31 | 0.572 |
| 32 | 32 | 0.551 |
| 33 | 33 | 0.288 |
| 34 | 34 | 0.319 |
| 35 | 35 | 0.426 |
| 36 | 36 | 0.801 |
| 37 | 37 | 0.432 |
| 38 | 38 | 0.209 |
| 39 | 39 | 0.155 |
| 4 | 4 | 0.117 |
| 40 | 40 | 0.0161 |
| 41 | 41 | 0.944 |
| 42 | 42 | 0.539 |
| 43 | 43 | 0.343 |
| 44 | 44 | 0.343 |
| 45 | 45 | 0.0976 |
| 46 | 46 | 0.354 |
| 47 | 47 | 0.342 |
| 48 | 48 | 0.17 |
| 49 | 49 | 0.428 |
| 5 | 5 | 0.961 |
| 50 | 50 | 0.416 |
| 51 | 51 | 0.441 |
| 52 | 52 | 0.336 |
| 53 | 53 | 0.994 |
| 54 | 54 | 0.512 |
| 55 | 55 | 0.743 |
| 56 | 56 | 0.281 |
| 57 | 57 | 0.354 |
| 58 | 58 | 0.812 |
| 59 | 59 | 0.0551 |
| 6 | 6 | 0.322 |
| 60 | 60 | 0.166 |
| 61 | 61 | 0.67 |
| 62 | 62 | 0.985 |
| 63 | 63 | 0.149 |
| 64 | 64 | 0.194 |
| 65 | 65 | 0.0606 |
| 66 | 66 | 0.606 |
| 67 | 67 | 0.478 |
| 68 | 68 | 0.655 |
| 69 | 69 | 0.16 |
| 7 | 7 | 0.46 |
| 70 | 70 | 0.0263 |
| 71 | 71 | 0.281 |
| 72 | 72 | 0.572 |
| 73 | 73 | 0.0871 |
| 74 | 74 | 0.109 |
| 75 | 75 | 0.447 |
| 76 | 76 | 0.46 |
| 77 | 77 | 0.0266 |
| 78 | 78 | 0.189 |
| 79 | 79 | 0.8 |
| 8 | 8 | 0.165 |
| 80 | 80 | 0.602 |
| 81 | 81 | 1 |
| 82 | 82 | 0.805 |
| 83 | 83 | 0.993 |
| 84 | 84 | 0.582 |
| 85 | 85 | 0.321 |
| 86 | 86 | 0.781 |
| 87 | 87 | 0.207 |
| 88 | 88 | 0.315 |
| 89 | 89 | 0.034 |
| 9 | 9 | 0.474 |
| 90 | 90 | 0.29 |
| 91 | 91 | 0.246 |
| 92 | 92 | 0.483 |
| 93 | 93 | 0.717 |
| 94 | 94 | 0.404 |
| 95 | 95 | 0.266 |
| 96 | 96 | 0.935 |
| 97 | 97 | 0.856 |
| 98 | 98 | 0.263 |
| 99 | 99 | 0.0211 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11336
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0002159 (general ecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000575 (corneal epithelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000970 (eye)
0000019 (camera-type eye)
0000033 (head)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0010313 (neural crest-derived structure)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0000020 (sense organ)
0001032 (sensory system)
0010317 (germ layer / neural crest derived structure)
0000964 (cornea)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0010409 (eye surface)
0004456 (entire sense organ system)
0001456 (face)
0010230 (eyeball of camera-type eye)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000043 (human corneal epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000221 (ectodermal cell)
