FF:11693-123A1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000019,UBERON: | |DRA_sample_Accession=CAGE@SAMD00004707 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008521;DRR009393;DRZ000818;DRZ002203;DRZ012168;DRZ013553 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000970,UBERON:0000019,UBERON:0000033,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000047,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000020,UBERON:0002203,UBERON:0001768,UBERON:0001032,UBERON:0002049,UBERON:0002200,UBERON:0006876,UBERON:0010317,UBERON:0007798,UBERON:0005969,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0004535,UBERON:0002104,UBERON:0001801,UBERON:0004456,UBERON:0001456,UBERON:0010230,UBERON:0001009,UBERON:0003956 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0002367 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000188 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Trabecular%2520Meshwork%2520Cells%252c%2520donor3.CNhs12124.11693-123A1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Trabecular%2520Meshwork%2520Cells%252c%2520donor3.CNhs12124.11693-123A1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Trabecular%2520Meshwork%2520Cells%252c%2520donor3.CNhs12124.11693-123A1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Trabecular%2520Meshwork%2520Cells%252c%2520donor3.CNhs12124.11693-123A1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Trabecular%2520Meshwork%2520Cells%252c%2520donor3.CNhs12124.11693-123A1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11693-123A1 | |id=FF:11693-123A1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000188 | ||
|is_obsolete= | |||
|library_id=CNhs12124 | |||
|library_id_phase_based=2:CNhs12124 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11693 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11693 | |||
|name=Trabecular Meshwork Cells, donor3 | |name=Trabecular Meshwork Cells, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12124,LSID839,release011,COMPLETED | |profile_hcage=CNhs12124,LSID839,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10005,,, | |profile_srnaseq=SRhi10005,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=123 | |rna_box=123 | ||
|rna_catalog_number=SC6595 | |rna_catalog_number=SC6595 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=lot:3423 | |sample_cell_catalog=lot:3423 | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.56328945259798e-222!GO:0043231;intracellular membrane-bound organelle;3.79957379085161e-182!GO:0043227;membrane-bound organelle;6.54135017750916e-182!GO:0043226;organelle;9.76641393288494e-181!GO:0043229;intracellular organelle;1.35355398891638e-180!GO:0005737;cytoplasm;3.86695282439089e-175!GO:0044422;organelle part;3.69890664453437e-126!GO:0044446;intracellular organelle part;8.79139895906419e-125!GO:0044444;cytoplasmic part;7.40673237851657e-121!GO:0044237;cellular metabolic process;1.61028190913592e-86!GO:0044238;primary metabolic process;2.70656300329842e-86!GO:0032991;macromolecular complex;1.35181377886151e-78!GO:0043170;macromolecule metabolic process;3.75881618124649e-76!GO:0005634;nucleus;2.27270136220815e-73!GO:0030529;ribonucleoprotein complex;1.55179504576164e-72!GO:0005515;protein binding;1.48325375597863e-69!GO:0005739;mitochondrion;1.78121355174866e-69!GO:0043233;organelle lumen;4.19135688968892e-65!GO:0031974;membrane-enclosed lumen;4.19135688968892e-65!GO:0044428;nuclear part;1.83813273172132e-61!GO:0003723;RNA binding;5.89345553708543e-54!GO:0005840;ribosome;4.31357637334838e-46!GO:0044429;mitochondrial part;2.79328795487899e-45!GO:0031090;organelle membrane;1.85053271521054e-44!GO:0016043;cellular component organization and biogenesis;4.9634446888675e-44!GO:0043283;biopolymer metabolic process;1.38847283831914e-43!GO:0006412;translation;6.73344875947647e-43!GO:0019538;protein metabolic process;1.9303466698224e-42!GO:0009058;biosynthetic process;1.17854747383544e-41!GO:0003735;structural constituent of ribosome;1.08299329762674e-40!GO:0031967;organelle envelope;1.58316952993325e-39!GO:0044249;cellular biosynthetic process;2.37242456780481e-39!GO:0031975;envelope;3.78519193927758e-39!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.11236374907171e-39!GO:0010467;gene expression;2.48303234101855e-38!GO:0006396;RNA processing;2.53495831565283e-38!GO:0043234;protein complex;2.81486209327657e-38!GO:0044260;cellular macromolecule metabolic process;3.85730944760315e-38!GO:0031981;nuclear lumen;8.2782191144864e-38!GO:0044267;cellular protein metabolic process;1.26529386397741e-37!GO:0033279;ribosomal subunit;4.15677228981283e-35!GO:0009059;macromolecule biosynthetic process;5.1807471601939e-35!GO:0006996;organelle organization and biogenesis;1.4360551403397e-34!GO:0015031;protein transport;1.22665955348739e-31!GO:0033036;macromolecule localization;1.53973686343773e-31!GO:0005829;cytosol;1.70764067520718e-31!GO:0005740;mitochondrial envelope;1.371183216878e-30!GO:0016071;mRNA metabolic process;2.26073525537686e-30!GO:0006259;DNA metabolic process;2.87770354486403e-30!GO:0043228;non-membrane-bound organelle;4.30754088745396e-30!GO:0043232;intracellular non-membrane-bound organelle;4.30754088745396e-30!GO:0031966;mitochondrial membrane;5.13365992095845e-29!GO:0008104;protein localization;6.64579216272931e-29!GO:0065003;macromolecular complex assembly;9.68855364879975e-29!GO:0045184;establishment of protein localization;1.10592952283522e-28!GO:0019866;organelle inner membrane;4.48882470680218e-28!GO:0008380;RNA splicing;7.92060705383153e-28!GO:0005743;mitochondrial inner membrane;2.65082777870692e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.97309431287096e-26!GO:0046907;intracellular transport;3.01259024838043e-26!GO:0022607;cellular component assembly;1.45260056084379e-25!GO:0006397;mRNA processing;2.42780644592072e-25!GO:0005654;nucleoplasm;8.67986573237408e-24!GO:0007049;cell cycle;1.39528412197225e-23!GO:0003676;nucleic acid binding;1.19868242392906e-21!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.30374802998476e-21!GO:0006886;intracellular protein transport;1.4183179011825e-21!GO:0044451;nucleoplasm part;2.55300063131647e-20!GO:0044445;cytosolic part;2.71323142871436e-20!GO:0005681;spliceosome;1.12648449626129e-19!GO:0015934;large ribosomal subunit;2.86043948023094e-19!GO:0000166;nucleotide binding;5.74634346268537e-19!GO:0031980;mitochondrial lumen;1.80631965323667e-18!GO:0005759;mitochondrial matrix;1.80631965323667e-18!GO:0022402;cell cycle process;2.41252499796599e-18!GO:0006119;oxidative phosphorylation;2.58156867700744e-18!GO:0044455;mitochondrial membrane part;2.97452287033007e-18!GO:0008134;transcription factor binding;1.13436702211086e-17!GO:0016070;RNA metabolic process;4.34478305253514e-17!GO:0015935;small ribosomal subunit;6.77176405191773e-17!GO:0048770;pigment granule;7.91537533839678e-17!GO:0042470;melanosome;7.91537533839678e-17!GO:0005783;endoplasmic reticulum;8.18482219876881e-17!GO:0000278;mitotic cell cycle;2.07246394942544e-16!GO:0006457;protein folding;2.25778807548909e-16!GO:0051276;chromosome organization and biogenesis;4.074799049913e-16!GO:0016874;ligase activity;5.78731659349431e-16!GO:0012505;endomembrane system;8.00101497750335e-16!GO:0051649;establishment of cellular localization;1.28974681576595e-15!GO:0016462;pyrophosphatase activity;1.68547152367803e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.12138778937962e-15!GO:0051641;cellular localization;2.12138778937962e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;2.48250869403909e-15!GO:0005746;mitochondrial respiratory chain;2.8146310433267e-15!GO:0051186;cofactor metabolic process;5.44483793640566e-15!GO:0017111;nucleoside-triphosphatase activity;6.46695808201119e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;7.00452153149306e-15!GO:0005694;chromosome;8.91675710092065e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.61453577753781e-14!GO:0044432;endoplasmic reticulum part;2.9765658747751e-14!GO:0005730;nucleolus;3.64300601999725e-14!GO:0050136;NADH dehydrogenase (quinone) activity;4.98066198723246e-14!GO:0003954;NADH dehydrogenase activity;4.98066198723246e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.98066198723246e-14!GO:0044427;chromosomal part;5.19890903377572e-14!GO:0006323;DNA packaging;5.25191306139669e-14!GO:0006512;ubiquitin cycle;8.65973007398953e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.13913742728537e-14!GO:0006605;protein targeting;1.47403253202527e-13!GO:0032553;ribonucleotide binding;3.64126191240585e-13!GO:0032555;purine ribonucleotide binding;3.64126191240585e-13!GO:0017076;purine nucleotide binding;4.01956610562274e-13!GO:0006974;response to DNA damage stimulus;4.94805804214024e-13!GO:0005794;Golgi apparatus;1.02435605972247e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.16189190255394e-12!GO:0005761;mitochondrial ribosome;1.20063426795849e-12!GO:0000313;organellar ribosome;1.20063426795849e-12!GO:0044265;cellular macromolecule catabolic process;2.28402563569321e-12!GO:0022618;protein-RNA complex assembly;2.59985081311934e-12!GO:0022403;cell cycle phase;3.67442005836376e-12!GO:0030964;NADH dehydrogenase complex (quinone);3.82460362046372e-12!GO:0045271;respiratory chain complex I;3.82460362046372e-12!GO:0005747;mitochondrial respiratory chain complex I;3.82460362046372e-12!GO:0043285;biopolymer catabolic process;4.84067128463613e-12!GO:0042775;organelle ATP synthesis coupled electron transport;4.84067128463613e-12!GO:0042773;ATP synthesis coupled electron transport;4.84067128463613e-12!GO:0008135;translation factor activity, nucleic acid binding;5.26745231653444e-12!GO:0043412;biopolymer modification;6.07532691026248e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.71715684903992e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.19528957825803e-11!GO:0000785;chromatin;1.22813051965431e-11!GO:0006732;coenzyme metabolic process;1.43853089689057e-11!GO:0005524;ATP binding;1.62551100884359e-11!GO:0006333;chromatin assembly or disassembly;1.69196860074656e-11!GO:0003712;transcription cofactor activity;2.08538750941315e-11!GO:0065004;protein-DNA complex assembly;2.26033801190155e-11!GO:0032559;adenyl ribonucleotide binding;2.67282240668961e-11!GO:0007067;mitosis;2.67282240668961e-11!GO:0000087;M phase of mitotic cell cycle;2.72730333509797e-11!GO:0009057;macromolecule catabolic process;3.23119914386861e-11!GO:0030554;adenyl nucleotide binding;3.85335272806656e-11!GO:0044248;cellular catabolic process;4.29774572067415e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;4.63095268790579e-11!GO:0051082;unfolded protein binding;5.17416921124326e-11!GO:0051726;regulation of cell cycle;5.89162250172621e-11!GO:0019941;modification-dependent protein catabolic process;5.89162250172621e-11!GO:0043632;modification-dependent macromolecule catabolic process;5.89162250172621e-11!GO:0000502;proteasome complex (sensu Eukaryota);6.35897868194903e-11!GO:0000074;regulation of progression through cell cycle;6.35897868194903e-11!GO:0006511;ubiquitin-dependent protein catabolic process;8.85771042245348e-11!GO:0044257;cellular protein catabolic process;9.43226117971166e-11!GO:0009055;electron carrier activity;1.04968960045664e-10!GO:0006464;protein modification process;1.07968955103896e-10!GO:0006281;DNA repair;1.59319669033475e-10!GO:0005793;ER-Golgi intermediate compartment;1.65643568312811e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;1.77257752950936e-10!GO:0000375;RNA splicing, via transesterification reactions;1.77257752950936e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.77257752950936e-10!GO:0006260;DNA replication;2.28174437952385e-10!GO:0012501;programmed cell death;3.87686271395919e-10!GO:0005635;nuclear envelope;4.6735683283383e-10!GO:0006913;nucleocytoplasmic transport;4.68202399396935e-10!GO:0006334;nucleosome assembly;5.31631571738489e-10!GO:0031497;chromatin assembly;5.85067634096224e-10!GO:0048523;negative regulation of cellular process;6.03709775922457e-10!GO:0030163;protein catabolic process;6.76143641865968e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.79842163764303e-10!GO:0016604;nuclear body;8.20519670846931e-10!GO:0006915;apoptosis;8.8227433102737e-10!GO:0042254;ribosome biogenesis and assembly;9.27305173558766e-10!GO:0005789;endoplasmic reticulum membrane;1.02403487116689e-09!GO:0051169;nuclear transport;1.05689197502561e-09!GO:0048193;Golgi vesicle transport;1.24970099557801e-09!GO:0050794;regulation of cellular process;1.39394826071761e-09!GO:0009719;response to endogenous stimulus;1.47389527997403e-09!GO:0006366;transcription from RNA polymerase II promoter;2.43864245688156e-09!GO:0017038;protein import;2.64273648475014e-09!GO:0003743;translation initiation factor activity;3.03239548650566e-09!GO:0031965;nuclear membrane;3.97617092211697e-09!GO:0051301;cell division;5.33758310157076e-09!GO:0043687;post-translational protein modification;5.38992744352706e-09!GO:0006399;tRNA metabolic process;5.45506433462212e-09!GO:0008219;cell death;7.63846138299315e-09!GO:0016265;death;7.63846138299315e-09!GO:0000279;M phase;9.07470636648297e-09!GO:0044453;nuclear membrane part;1.94909462758615e-08!GO:0051188;cofactor biosynthetic process;2.04615800613632e-08!GO:0016192;vesicle-mediated transport;2.53795971899275e-08!GO:0006163;purine nucleotide metabolic process;3.42390729450901e-08!GO:0048519;negative regulation of biological process;3.68469561019066e-08!GO:0030532;small nuclear ribonucleoprotein complex;4.75522671860005e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.60832057545529e-08!GO:0004812;aminoacyl-tRNA ligase activity;5.60832057545529e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.60832057545529e-08!GO:0016740;transferase activity;6.22054452840576e-08!GO:0009150;purine ribonucleotide metabolic process;7.57090692059107e-08!GO:0006446;regulation of translational initiation;8.08240168701173e-08!GO:0006461;protein complex assembly;8.75361537491117e-08!GO:0016568;chromatin modification;8.75413525115667e-08!GO:0009259;ribonucleotide metabolic process;1.00498346763959e-07!GO:0008639;small protein conjugating enzyme activity;1.01549734189297e-07!GO:0015630;microtubule cytoskeleton;1.21269757144166e-07!GO:0006164;purine nucleotide biosynthetic process;1.97911134122647e-07!GO:0006413;translational initiation;1.97911134122647e-07!GO:0016607;nuclear speck;1.99967571896104e-07!GO:0045786;negative regulation of progression through cell cycle;2.06355659481457e-07!GO:0043038;amino acid activation;2.07626704928815e-07!GO:0006418;tRNA aminoacylation for protein translation;2.07626704928815e-07!GO:0043039;tRNA aminoacylation;2.07626704928815e-07!GO:0004842;ubiquitin-protein ligase activity;2.17458703166062e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.40712806019193e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.05169312652233e-07!GO:0016491;oxidoreductase activity;3.10089819372042e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.64694338424243e-07!GO:0009152;purine ribonucleotide biosynthetic process;4.31709660138557e-07!GO:0007005;mitochondrion organization and biogenesis;4.33211681362432e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.80923649824609e-07!GO:0016563;transcription activator activity;5.66851061403159e-07!GO:0009141;nucleoside triphosphate metabolic process;5.73974811494404e-07!GO:0008565;protein transporter activity;6.13720445469053e-07!GO:0042623;ATPase activity, coupled;6.71691336522425e-07!GO:0019787;small conjugating protein ligase activity;7.09385127655606e-07!GO:0005788;endoplasmic reticulum lumen;7.75333079032967e-07!GO:0003924;GTPase activity;8.09722739975922e-07!GO:0009260;ribonucleotide biosynthetic process;8.68307213772507e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.68307213772507e-07!GO:0009144;purine nucleoside triphosphate metabolic process;8.68307213772507e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;9.36848772525556e-07!GO:0016887;ATPase activity;1.10211152292177e-06!GO:0042981;regulation of apoptosis;1.23445850502737e-06!GO:0050789;regulation of biological process;1.33265672685072e-06!GO:0043067;regulation of programmed cell death;1.35711430456808e-06!GO:0005667;transcription factor complex;1.43633710371629e-06!GO:0003713;transcription coactivator activity;1.51035705723344e-06!GO:0006364;rRNA processing;1.55737293831603e-06!GO:0051329;interphase of mitotic cell cycle;1.65829852876073e-06!GO:0000786;nucleosome;1.79852452475687e-06!GO:0009060;aerobic respiration;1.81523757397251e-06!GO:0030120;vesicle coat;1.87943696464087e-06!GO:0030662;coated vesicle membrane;1.87943696464087e-06!GO:0065002;intracellular protein transport across a membrane;1.9357574058104e-06!GO:0009056;catabolic process;1.99654201486505e-06!GO:0005643;nuclear pore;2.15002104582166e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.33517850741604e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.33517850741604e-06!GO:0003697;single-stranded DNA binding;2.58102446919797e-06!GO:0016564;transcription repressor activity;2.58945828506448e-06!GO:0016072;rRNA metabolic process;2.89062573806384e-06!GO:0016853;isomerase activity;3.08131784353378e-06!GO:0016881;acid-amino acid ligase activity;3.23827714153282e-06!GO:0051170;nuclear import;3.37615718226852e-06!GO:0006606;protein import into nucleus;3.7231635679504e-06!GO:0004386;helicase activity;3.7256850075227e-06!GO:0016779;nucleotidyltransferase activity;3.7256850075227e-06!GO:0009108;coenzyme biosynthetic process;3.73522747448817e-06!GO:0051246;regulation of protein metabolic process;3.89644606345644e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.191869466295e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.191869466295e-06!GO:0015986;ATP synthesis coupled proton transport;4.44314016521277e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.44314016521277e-06!GO:0009117;nucleotide metabolic process;5.60548645473906e-06!GO:0031324;negative regulation of cellular metabolic process;5.8796094394558e-06!GO:0045333;cellular respiration;6.70665964445801e-06!GO:0005762;mitochondrial large ribosomal subunit;7.51210668045926e-06!GO:0000315;organellar large ribosomal subunit;7.51210668045926e-06!GO:0046930;pore complex;7.88959251223802e-06!GO:0051325;interphase;8.38013386072846e-06!GO:0015078;hydrogen ion transmembrane transporter activity;9.35651930632319e-06!GO:0046034;ATP metabolic process;9.84178196667298e-06!GO:0006091;generation of precursor metabolites and energy;1.02344371491087e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.1044406188595e-05!GO:0045259;proton-transporting ATP synthase complex;1.2284826115017e-05!GO:0048475;coated membrane;1.2284826115017e-05!GO:0030117;membrane coat;1.2284826115017e-05!GO:0008654;phospholipid biosynthetic process;1.31855470132534e-05!GO:0008026;ATP-dependent helicase activity;1.44447687350992e-05!GO:0005813;centrosome;1.55093436157231e-05!GO:0031252;leading edge;2.08892510415196e-05!GO:0019829;cation-transporting ATPase activity;2.09848957686098e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.30384977869316e-05!GO:0006916;anti-apoptosis;2.53888749829194e-05!GO:0003714;transcription corepressor activity;2.65337679656972e-05!GO:0044431;Golgi apparatus part;2.74895765615588e-05!GO:0006099;tricarboxylic acid cycle;2.7546805093253e-05!GO:0046356;acetyl-CoA catabolic process;2.7546805093253e-05!GO:0045454;cell redox homeostasis;2.84306325614905e-05!GO:0043566;structure-specific DNA binding;2.94416844919456e-05!GO:0005768;endosome;3.06874059619648e-05!GO:0005905;coated pit;3.24039102407369e-05!GO:0006793;phosphorus metabolic process;3.73295977061504e-05!GO:0006796;phosphate metabolic process;3.73295977061504e-05!GO:0005815;microtubule organizing center;3.94731373534559e-05!GO:0043069;negative regulation of programmed cell death;4.28272344804822e-05!GO:0051187;cofactor catabolic process;4.32364305484808e-05!GO:0051427;hormone receptor binding;4.37011661561811e-05!GO:0009892;negative regulation of metabolic process;4.61489882596353e-05!GO:0008361;regulation of cell size;4.6618073895125e-05!GO:0006754;ATP biosynthetic process;4.6618073895125e-05!GO:0006753;nucleoside phosphate metabolic process;4.6618073895125e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.91637904791873e-05!GO:0005791;rough endoplasmic reticulum;5.09965089486602e-05!GO:0006084;acetyl-CoA metabolic process;5.12982650636702e-05!GO:0043066;negative regulation of apoptosis;5.4098235622762e-05!GO:0016049;cell growth;6.16997601380466e-05!GO:0030036;actin cytoskeleton organization and biogenesis;6.36925333458545e-05!GO:0032446;protein modification by small protein conjugation;6.38016611544642e-05!GO:0016469;proton-transporting two-sector ATPase complex;6.96093784733115e-05!GO:0043623;cellular protein complex assembly;6.96093784733115e-05!GO:0006403;RNA localization;6.96093784733115e-05!GO:0009109;coenzyme catabolic process;6.96093784733115e-05!GO:0000245;spliceosome assembly;7.46321983463462e-05!GO:0019222;regulation of metabolic process;7.46739997151154e-05!GO:0050657;nucleic acid transport;7.46739997151154e-05!GO:0051236;establishment of RNA localization;7.46739997151154e-05!GO:0050658;RNA transport;7.46739997151154e-05!GO:0003899;DNA-directed RNA polymerase activity;8.0022373388112e-05!GO:0016481;negative regulation of transcription;8.14616606116341e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.31287750761344e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.31475039979895e-05!GO:0035257;nuclear hormone receptor binding;8.38473438847272e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.60107254329084e-05!GO:0005819;spindle;9.08889256543152e-05!GO:0016787;hydrolase activity;9.39446254523011e-05!GO:0016859;cis-trans isomerase activity;9.70886804803927e-05!GO:0016567;protein ubiquitination;0.000100808270453721!GO:0006752;group transfer coenzyme metabolic process;0.000108040489348961!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000118769075709865!GO:0016023;cytoplasmic membrane-bound vesicle;0.000129744671180091!GO:0031988;membrane-bound vesicle;0.000139614899227643!GO:0016310;phosphorylation;0.000139614899227643!GO:0019867;outer membrane;0.000153880234166226!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000153880234166226!GO:0019899;enzyme binding;0.000155245402762353!GO:0016126;sterol biosynthetic process;0.000155471828083767!GO:0001558;regulation of cell growth;0.00015617754942193!GO:0005839;proteasome core complex (sensu Eukaryota);0.000159771990295494!GO:0007010;cytoskeleton organization and biogenesis;0.000188093273327968!GO:0008610;lipid biosynthetic process;0.000188896874069524!GO:0030867;rough endoplasmic reticulum membrane;0.000189980133497638!GO:0044440;endosomal part;0.00022009362454019!GO:0010008;endosome membrane;0.00022009362454019!GO:0031968;organelle outer membrane;0.000221352759758131!GO:0048522;positive regulation of cellular process;0.0002398305331633!GO:0033116;ER-Golgi intermediate compartment membrane;0.000243504302421639!GO:0000151;ubiquitin ligase complex;0.000243504302421639!GO:0005770;late endosome;0.000243951068982942!GO:0005525;GTP binding;0.00026294188114961!GO:0046474;glycerophospholipid biosynthetic process;0.000303222410673378!GO:0005773;vacuole;0.000336193831394298!GO:0000139;Golgi membrane;0.000379555703580997!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000421182304839229!GO:0005798;Golgi-associated vesicle;0.000438635932900575!GO:0006261;DNA-dependent DNA replication;0.000438635932900575!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000492139022920462!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000500902803531848!GO:0030176;integral to endoplasmic reticulum membrane;0.000504039602685407!GO:0005741;mitochondrial outer membrane;0.000553474047504148!GO:0045941;positive regulation of transcription;0.000560199966152855!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000607626220287731!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000613748846298578!GO:0031982;vesicle;0.000639377884783706!GO:0007050;cell cycle arrest;0.000646430229164284!GO:0044262;cellular carbohydrate metabolic process;0.000666138188901172!GO:0031410;cytoplasmic vesicle;0.000681751341836903!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000744709338185725!GO:0030029;actin filament-based process;0.000748755795436009!GO:0015980;energy derivation by oxidation of organic compounds;0.000807541150184478!GO:0006082;organic acid metabolic process;0.000816171367410919!GO:0065007;biological regulation;0.000847533058992649!GO:0004298;threonine endopeptidase activity;0.000897373687253512!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000914607369494139!GO:0005769;early endosome;0.000957360044205156!GO:0019752;carboxylic acid metabolic process;0.000957360044205156!GO:0043021;ribonucleoprotein binding;0.000966740184419692!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0010261052342743!GO:0043681;protein import into mitochondrion;0.00104517995482411!GO:0007006;mitochondrial membrane organization and biogenesis;0.00111569361109973!GO:0045893;positive regulation of transcription, DNA-dependent;0.00116936441915376!GO:0006414;translational elongation;0.00120622371916013!GO:0000314;organellar small ribosomal subunit;0.00120873856529089!GO:0005763;mitochondrial small ribosomal subunit;0.00120873856529089!GO:0042802;identical protein binding;0.0012296785458751!GO:0000323;lytic vacuole;0.00133177251551598!GO:0005764;lysosome;0.00133177251551598!GO:0051101;regulation of DNA binding;0.00134882473658324!GO:0005885;Arp2/3 protein complex;0.00142651038396536!GO:0051028;mRNA transport;0.00145050972334474!GO:0006695;cholesterol biosynthetic process;0.00147521597169586!GO:0006979;response to oxidative stress;0.00153010276280739!GO:0030132;clathrin coat of coated pit;0.00153962326516123!GO:0008250;oligosaccharyl transferase complex;0.00154790710612975!GO:0006613;cotranslational protein targeting to membrane;0.00154790710612975!GO:0019843;rRNA binding;0.00169628213109333!GO:0051920;peroxiredoxin activity;0.00170273610547238!GO:0003724;RNA helicase activity;0.00172357057271552!GO:0005048;signal sequence binding;0.00185473115485969!GO:0043488;regulation of mRNA stability;0.00188918356677955!GO:0043487;regulation of RNA stability;0.00188918356677955!GO:0043284;biopolymer biosynthetic process;0.00189413297532625!GO:0032561;guanyl ribonucleotide binding;0.0020828113795033!GO:0019001;guanyl nucleotide binding;0.0020828113795033!GO:0046467;membrane lipid biosynthetic process;0.00208602669408947!GO:0008094;DNA-dependent ATPase activity;0.00210200061024291!GO:0030133;transport vesicle;0.00217006766574775!GO:0005874;microtubule;0.00231200787475061!GO:0007051;spindle organization and biogenesis;0.00242378685879479!GO:0065009;regulation of a molecular function;0.0024958215224024!GO:0006626;protein targeting to mitochondrion;0.00254166399193922!GO:0006402;mRNA catabolic process;0.00277251968474346!GO:0051789;response to protein stimulus;0.00278862738095275!GO:0006986;response to unfolded protein;0.00278862738095275!GO:0015631;tubulin binding;0.00289798446440039!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00304255789090901!GO:0006839;mitochondrial transport;0.0030448519337746!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00308828422681333!GO:0005657;replication fork;0.00310235993845805!GO:0006289;nucleotide-excision repair;0.00331716647488253!GO:0045892;negative regulation of transcription, DNA-dependent;0.00336397213309543!GO:0009165;nucleotide biosynthetic process;0.00347374442302238!GO:0030027;lamellipodium;0.00348881405059911!GO:0008033;tRNA processing;0.00352962068037127!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0036391911441562!GO:0003682;chromatin binding;0.00366032689005678!GO:0030880;RNA polymerase complex;0.00374639551502608!GO:0006383;transcription from RNA polymerase III promoter;0.00380709716597827!GO:0003684;damaged DNA binding;0.00405395686366923!GO:0051252;regulation of RNA metabolic process;0.00405395686366923!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00405395686366923!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.004066048941798!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.004066048941798!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.004066048941798!GO:0031323;regulation of cellular metabolic process;0.00410837557812506!GO:0040008;regulation of growth;0.00432617901325487!GO:0016363;nuclear matrix;0.00433376834267189!GO:0006778;porphyrin metabolic process;0.00447102497840191!GO:0033013;tetrapyrrole metabolic process;0.00447102497840191!GO:0006520;amino acid metabolic process;0.00447433377895016!GO:0045792;negative regulation of cell size;0.00451620835270596!GO:0017166;vinculin binding;0.00454373793940041!GO:0006350;transcription;0.0045759040530077!GO:0008652;amino acid biosynthetic process;0.004780081113626!GO:0005684;U2-dependent spliceosome;0.0048274113133834!GO:0030308;negative regulation of cell growth;0.00544403058471172!GO:0000059;protein import into nucleus, docking;0.00545535966644953!GO:0018196;peptidyl-asparagine modification;0.00551078442224877!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00551078442224877!GO:0008632;apoptotic program;0.00551078442224877!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00576450746575674!GO:0016741;transferase activity, transferring one-carbon groups;0.0059043036386837!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00591585817783828!GO:0000075;cell cycle checkpoint;0.00593216994020445!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00599061706097338!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00599061706097338!GO:0006595;polyamine metabolic process;0.00599061706097338!GO:0016044;membrane organization and biogenesis;0.00602509549712988!GO:0000049;tRNA binding;0.00603800202900867!GO:0030663;COPI coated vesicle membrane;0.00607869306144156!GO:0030126;COPI vesicle coat;0.00607869306144156!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00612500295222494!GO:0046489;phosphoinositide biosynthetic process;0.00615440847221556!GO:0051168;nuclear export;0.00638433374984463!GO:0006740;NADPH regeneration;0.00638433374984463!GO:0006098;pentose-phosphate shunt;0.00638433374984463!GO:0030041;actin filament polymerization;0.0064549202298749!GO:0004576;oligosaccharyl transferase activity;0.00649577340303033!GO:0007264;small GTPase mediated signal transduction;0.00659777620429842!GO:0007346;regulation of progression through mitotic cell cycle;0.00661839074426736!GO:0008168;methyltransferase activity;0.00664239282487728!GO:0000082;G1/S transition of mitotic cell cycle;0.00667369639913855!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00667753886541333!GO:0006401;RNA catabolic process;0.00702162026043757!GO:0000084;S phase of mitotic cell cycle;0.00707835621028639!GO:0048518;positive regulation of biological process;0.00711350068769038!GO:0035258;steroid hormone receptor binding;0.00717182145493209!GO:0008139;nuclear localization sequence binding;0.00718223223016474!GO:0008154;actin polymerization and/or depolymerization;0.00718223223016474!GO:0007243;protein kinase cascade;0.00718223223016474!GO:0051098;regulation of binding;0.00719316136388872!GO:0000775;chromosome, pericentric region;0.00723108530793189!GO:0050662;coenzyme binding;0.00729337598365813!GO:0048471;perinuclear region of cytoplasm;0.00745940996505158!GO:0040029;regulation of gene expression, epigenetic;0.00745940996505158!GO:0030137;COPI-coated vesicle;0.007538238742037!GO:0006779;porphyrin biosynthetic process;0.00754474578239693!GO:0033014;tetrapyrrole biosynthetic process;0.00754474578239693!GO:0008092;cytoskeletal protein binding;0.0075616075182569!GO:0032508;DNA duplex unwinding;0.00783841122964546!GO:0032392;DNA geometric change;0.00783841122964546!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0078980418592672!GO:0000428;DNA-directed RNA polymerase complex;0.0078980418592672!GO:0031272;regulation of pseudopodium formation;0.00809963401825206!GO:0031269;pseudopodium formation;0.00809963401825206!GO:0031344;regulation of cell projection organization and biogenesis;0.00809963401825206!GO:0031268;pseudopodium organization and biogenesis;0.00809963401825206!GO:0031346;positive regulation of cell projection organization and biogenesis;0.00809963401825206!GO:0031274;positive regulation of pseudopodium formation;0.00809963401825206!GO:0006338;chromatin remodeling;0.00846648356152658!GO:0031072;heat shock protein binding;0.00875495087674047!GO:0000792;heterochromatin;0.00893269356577509!GO:0005774;vacuolar membrane;0.00896648471490067!GO:0003678;DNA helicase activity;0.00897040382284262!GO:0030658;transport vesicle membrane;0.00950634014895172!GO:0007040;lysosome organization and biogenesis;0.0096751169779621!GO:0003729;mRNA binding;0.0096751169779621!GO:0016125;sterol metabolic process;0.0103389373549176!GO:0016860;intramolecular oxidoreductase activity;0.0104047974516148!GO:0006650;glycerophospholipid metabolic process;0.0106238257308802!GO:0006612;protein targeting to membrane;0.010714915015331!GO:0030118;clathrin coat;0.0107750730584324!GO:0006268;DNA unwinding during replication;0.010796337241459!GO:0030521;androgen receptor signaling pathway;0.0109676135779351!GO:0005637;nuclear inner membrane;0.0112669777209998!GO:0048487;beta-tubulin binding;0.0115266484583485!GO:0006352;transcription initiation;0.0115401089489746!GO:0006509;membrane protein ectodomain proteolysis;0.011694156031396!GO:0033619;membrane protein proteolysis;0.011694156031396!GO:0030145;manganese ion binding;0.0119044767064754!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0120185327635169!GO:0015002;heme-copper terminal oxidase activity;0.0120185327635169!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0120185327635169!GO:0004129;cytochrome-c oxidase activity;0.0120185327635169!GO:0008186;RNA-dependent ATPase activity;0.0121978848027583!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0123471388030696!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0123471388030696!GO:0051539;4 iron, 4 sulfur cluster binding;0.012631178244208!GO:0008286;insulin receptor signaling pathway;0.0127537607549255!GO:0010468;regulation of gene expression;0.0130504513262714!GO:0008047;enzyme activator activity;0.0131467764172282!GO:0048037;cofactor binding;0.0131467764172282!GO:0048468;cell development;0.0132109807572489!GO:0042168;heme metabolic process;0.0134993817969533!GO:0005096;GTPase activator activity;0.0136606772707471!GO:0031902;late endosome membrane;0.013821138951776!GO:0051128;regulation of cellular component organization and biogenesis;0.0140004896699865!GO:0003746;translation elongation factor activity;0.0142442493575302!GO:0030134;ER to Golgi transport vesicle;0.0142715328879554!GO:0051287;NAD binding;0.015251888072131!GO:0005100;Rho GTPase activator activity;0.0156044896282514!GO:0004674;protein serine/threonine kinase activity;0.0156894729772794!GO:0004177;aminopeptidase activity;0.0157164772554738!GO:0000123;histone acetyltransferase complex;0.0157164772554738!GO:0000096;sulfur amino acid metabolic process;0.015812033803282!GO:0008637;apoptotic mitochondrial changes;0.0159069254728785!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0164233381108581!GO:0006284;base-excision repair;0.0167148129752883!GO:0005869;dynactin complex;0.0167337110499287!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0172915352703723!GO:0051540;metal cluster binding;0.0175054682567587!GO:0051536;iron-sulfur cluster binding;0.0175054682567587!GO:0031529;ruffle organization and biogenesis;0.0175054682567587!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0175824556951662!GO:0006739;NADP metabolic process;0.0184504630148253!GO:0051087;chaperone binding;0.0184544767068454!GO:0000910;cytokinesis;0.0185796445774452!GO:0006118;electron transport;0.0186758342024323!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0187945154558933!GO:0046483;heterocycle metabolic process;0.0192100204137317!GO:0045926;negative regulation of growth;0.0198685429766286!GO:0044437;vacuolar part;0.0203593124517647!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0207135569447342!GO:0030125;clathrin vesicle coat;0.0214114470769466!GO:0030665;clathrin coated vesicle membrane;0.0214114470769466!GO:0019798;procollagen-proline dioxygenase activity;0.0214114470769466!GO:0033673;negative regulation of kinase activity;0.0215220164227739!GO:0006469;negative regulation of protein kinase activity;0.0215220164227739!GO:0008629;induction of apoptosis by intracellular signals;0.0220145778796819!GO:0051348;negative regulation of transferase activity;0.0222521007117837!GO:0030660;Golgi-associated vesicle membrane;0.0223926265768564!GO:0005765;lysosomal membrane;0.0225532966935983!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.02277945789656!GO:0015399;primary active transmembrane transporter activity;0.02277945789656!GO:0022415;viral reproductive process;0.02294887617194!GO:0006066;alcohol metabolic process;0.0233640099028225!GO:0006790;sulfur metabolic process;0.0233937088978003!GO:0006783;heme biosynthetic process;0.0234838602431629!GO:0007088;regulation of mitosis;0.0234838602431629!GO:0007033;vacuole organization and biogenesis;0.0235017661216204!GO:0016584;nucleosome positioning;0.0237988365587384!GO:0015992;proton transport;0.024394106153456!GO:0006891;intra-Golgi vesicle-mediated transport;0.0245392633938377!GO:0006818;hydrogen transport;0.0247312498997795!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0247474369781164!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0248547068062604!GO:0004004;ATP-dependent RNA helicase activity;0.0249465646983984!GO:0006497;protein amino acid lipidation;0.0252041254992947!GO:0046426;negative regulation of JAK-STAT cascade;0.0255876726566462!GO:0031543;peptidyl-proline dioxygenase activity;0.0256343708802367!GO:0030119;AP-type membrane coat adaptor complex;0.0256343708802367!GO:0043189;H4/H2A histone acetyltransferase complex;0.0264241505527686!GO:0001726;ruffle;0.0264241505527686!GO:0019318;hexose metabolic process;0.0264241505527686!GO:0030833;regulation of actin filament polymerization;0.0265545429207716!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0274398505100102!GO:0030127;COPII vesicle coat;0.0276440125296677!GO:0012507;ER to Golgi transport vesicle membrane;0.0276440125296677!GO:0043433;negative regulation of transcription factor activity;0.0276440125296677!GO:0016272;prefoldin complex;0.0278509661427566!GO:0005996;monosaccharide metabolic process;0.0278509661427566!GO:0008180;signalosome;0.0279055001406189!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0279531999315341!GO:0010257;NADH dehydrogenase complex assembly;0.0279531999315341!GO:0033108;mitochondrial respiratory chain complex assembly;0.0279531999315341!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0281948315083983!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0290403661016837!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0291684720507161!GO:0009303;rRNA transcription;0.0296335236378334!GO:0044452;nucleolar part;0.0297189043365951!GO:0046822;regulation of nucleocytoplasmic transport;0.0298640144742698!GO:0033559;unsaturated fatty acid metabolic process;0.0299652880430819!GO:0006636;unsaturated fatty acid biosynthetic process;0.0299652880430819!GO:0000209;protein polyubiquitination;0.0299652880430819!GO:0005862;muscle thin filament tropomyosin;0.0301961561040551!GO:0043022;ribosome binding;0.0315983908310395!GO:0006458;'de novo' protein folding;0.0319275158128005!GO:0051084;'de novo' posttranslational protein folding;0.0319275158128005!GO:0042158;lipoprotein biosynthetic process;0.0319907101637098!GO:0043065;positive regulation of apoptosis;0.0319907101637098!GO:0006220;pyrimidine nucleotide metabolic process;0.0321037817584338!GO:0030131;clathrin adaptor complex;0.0325633911816818!GO:0035035;histone acetyltransferase binding;0.0328927741738122!GO:0050178;phenylpyruvate tautomerase activity;0.0332921545031448!GO:0003711;transcription elongation regulator activity;0.0335662995639628!GO:0045334;clathrin-coated endocytic vesicle;0.0339450125792631!GO:0003690;double-stranded DNA binding;0.0340811551588739!GO:0031301;integral to organelle membrane;0.0341115714270384!GO:0043068;positive regulation of programmed cell death;0.0341115714270384!GO:0006310;DNA recombination;0.0343451491029551!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0345900602462955!GO:0005832;chaperonin-containing T-complex;0.0347872964702161!GO:0006506;GPI anchor biosynthetic process;0.0347872964702161!GO:0051320;S phase;0.0354795898053531!GO:0030503;regulation of cell redox homeostasis;0.0360620102102529!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0360620102102529!GO:0033043;regulation of organelle organization and biogenesis;0.0360620102102529!GO:0006733;oxidoreduction coenzyme metabolic process;0.0361268764533545!GO:0006807;nitrogen compound metabolic process;0.036281817877156!GO:0030508;thiol-disulfide exchange intermediate activity;0.0372586677184081!GO:0006405;RNA export from nucleus;0.0372731414826828!GO:0016301;kinase activity;0.0372731414826828!GO:0022408;negative regulation of cell-cell adhesion;0.0374896627937576!GO:0030518;steroid hormone receptor signaling pathway;0.0375399150188833!GO:0007265;Ras protein signal transduction;0.0379095418148483!GO:0017049;GTP-Rho binding;0.0383015752496083!GO:0006354;RNA elongation;0.0384205775706166!GO:0045936;negative regulation of phosphate metabolic process;0.0387008707868677!GO:0007090;regulation of S phase of mitotic cell cycle;0.0387008707868677!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0387008707868677!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0387008707868677!GO:0048500;signal recognition particle;0.0388970029735673!GO:0001953;negative regulation of cell-matrix adhesion;0.0390497301369042!GO:0006519;amino acid and derivative metabolic process;0.0394284334981954!GO:0035267;NuA4 histone acetyltransferase complex;0.0395015667678169!GO:0003756;protein disulfide isomerase activity;0.0399098635713383!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0399098635713383!GO:0046966;thyroid hormone receptor binding;0.039942847266533!GO:0030911;TPR domain binding;0.0401063765571384!GO:0006007;glucose catabolic process;0.0402108153239067!GO:0004003;ATP-dependent DNA helicase activity;0.0404167932372248!GO:0042393;histone binding;0.0404940113901285!GO:0051716;cellular response to stimulus;0.0409489702184475!GO:0004860;protein kinase inhibitor activity;0.0412882660543796!GO:0031418;L-ascorbic acid binding;0.0425165474295724!GO:0016407;acetyltransferase activity;0.043582917170957!GO:0019206;nucleoside kinase activity;0.0436189456420942!GO:0008538;proteasome activator activity;0.044062701447408!GO:0000228;nuclear chromosome;0.0441265413840548!GO:0000118;histone deacetylase complex;0.0445426067145524!GO:0045210;FasL biosynthetic process;0.0445426067145524!GO:0006564;L-serine biosynthetic process;0.0446491114930504!GO:0000922;spindle pole;0.0459861279228201!GO:0006505;GPI anchor metabolic process;0.046489312184423!GO:0006950;response to stress;0.0468357339660381!GO:0008312;7S RNA binding;0.0469035522416411!GO:0032906;transforming growth factor-beta2 production;0.0471711614667814!GO:0032909;regulation of transforming growth factor-beta2 production;0.0471711614667814!GO:0004680;casein kinase activity;0.0472871445313329!GO:0005099;Ras GTPase activator activity;0.0474418442950915!GO:0030128;clathrin coat of endocytic vesicle;0.0487257208300262!GO:0030669;clathrin-coated endocytic vesicle membrane;0.0487257208300262!GO:0030122;AP-2 adaptor complex;0.0487257208300262!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0490360850754701!GO:0016569;covalent chromatin modification;0.0490940781850427!GO:0031901;early endosome membrane;0.0491079917161895!GO:0043414;biopolymer methylation;0.0495354866849328!GO:0045806;negative regulation of endocytosis;0.0495532462239024!GO:0032507;maintenance of cellular protein localization;0.0495532462239024!GO:0030659;cytoplasmic vesicle membrane;0.0496031544237109!GO:0006607;NLS-bearing substrate import into nucleus;0.0498469710269501 | |||
|sample_id=11693 | |sample_id=11693 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=eye | |sample_tissue=eye | ||
|top_motifs=GTF2A1,2:1.88319841324;ZNF423:1.6818799586;TFAP4:1.67237905067;ESR1:1.536207049;ZNF238:1.53194260401;POU2F1..3:1.44316162061;XCPE1{core}:1.402022846;EBF1:1.320322602;SP1:1.17538765223;RXR{A,B,G}:1.16292902005;PBX1:1.07178223291;PATZ1:1.07094855925;NR5A1,2:1.03589606606;GLI1..3:1.0261479524;TFAP2{A,C}:0.999546902406;TFCP2:0.949873924412;GZF1:0.922634976702;ZIC1..3:0.897708154861;TAL1_TCF{3,4,12}:0.897689989086;HOX{A5,B5}:0.890312274165;ZNF148:0.872123218811;bHLH_family:0.840076089329;TLX1..3_NFIC{dimer}:0.801723953713;TFAP2B:0.777435980212;ALX4:0.747591321582;NFY{A,B,C}:0.727464230305;CEBPA,B_DDIT3:0.717577315991;TEAD1:0.70135205419;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.670559682472;GTF2I:0.644069072119;GFI1B:0.639916266916;HIC1:0.632636721909;GFI1:0.600372085306;NANOG{mouse}:0.574380034764;MZF1:0.573657396649;MTF1:0.5657974861;ZNF143:0.556525167788;TFDP1:0.539271733045;NR1H4:0.524599941535;YY1:0.491823176954;LHX3,4:0.464689729845;AR:0.461969050511;TOPORS:0.456187869073;EGR1..3:0.450091595387;RREB1:0.448126553165;NR3C1:0.431476192284;PAX5:0.417547635847;IKZF1:0.416977853028;ZBTB6:0.399373772998;MAZ:0.357690187308;POU5F1:0.354726423924;TBX4,5:0.342238764114;NR6A1:0.3236268043;RXRA_VDR{dimer}:0.32242726099;STAT5{A,B}:0.308506917372;SOX5:0.305265449813;SOX{8,9,10}:0.303733621375;HES1:0.30135870784;NFE2L2:0.301235238314;HNF4A_NR2F1,2:0.295033705464;SOX17:0.278434133816;XBP1:0.265833533745;FOX{I1,J2}:0.261453862185;TBP:0.25945648692;NFE2L1:0.256500211563;LEF1_TCF7_TCF7L1,2:0.245965904234;E2F1..5:0.230939172328;NKX3-1:0.23031051906;SRF:0.225849537615;REST:0.195266034735;TP53:0.1823538901;PAX8:0.152697426961;NKX2-3_NKX2-5:0.0820961398442;KLF4:0.0803040157467;SPZ1:0.0644073606976;NFE2:0.0562303293914;ATF6:0.0455832751802;PAX1,9:0.0263150006102;FOXD3:0.0100775171391;UFEwm:0.0067875744294;HNF1A:0.00140839814713;FOS_FOS{B,L1}_JUN{B,D}:-0.00620684009826;HAND1,2:-0.00621208698612;HLF:-0.0265228831727;BACH2:-0.0279184849064;MYBL2:-0.0302739751951;NKX2-2,8:-0.0396800381951;MED-1{core}:-0.0472643284175;ELK1,4_GABP{A,B1}:-0.0505234297416;CRX:-0.063610217744;RORA:-0.0669451871603;MYOD1:-0.0808639901399;NFIX:-0.0819412876568;ATF4:-0.0830921955153;ESRRA:-0.0871210461793;RFX1:-0.0892226775238;ONECUT1,2:-0.108103005461;MYB:-0.116315520798;LMO2:-0.132059164195;HMX1:-0.147143274304;NFATC1..3:-0.16784581846;EN1,2:-0.168242472254;HOXA9_MEIS1:-0.185385911025;FOSL2:-0.186849289157;NRF1:-0.189248054777;FOXQ1:-0.197316539805;NHLH1,2:-0.205968959929;PAX3,7:-0.249950913139;GCM1,2:-0.250304340063;POU3F1..4:-0.250754637756;POU1F1:-0.255358839349;HOX{A6,A7,B6,B7}:-0.263292028703;MEF2{A,B,C,D}:-0.278758954815;ZNF384:-0.308979880795;FOXL1:-0.314092159228;ARID5B:-0.316102641587;NFKB1_REL_RELA:-0.316418221153;PRRX1,2:-0.318359376457;FOX{F1,F2,J1}:-0.324083717821;BREu{core}:-0.327698531875;STAT2,4,6:-0.336776264846;MTE{core}:-0.354333251483;RUNX1..3:-0.355422047081;EP300:-0.370393245843;MYFfamily:-0.371923777854;AHR_ARNT_ARNT2:-0.388653273413;POU6F1:-0.393527060639;STAT1,3:-0.396405953163;PPARG:-0.403359293215;CUX2:-0.416624714924;GATA6:-0.419056676394;CREB1:-0.42489341898;ZFP161:-0.429480476118;ETS1,2:-0.433875982767;SPI1:-0.443759414667;VSX1,2:-0.459088590474;NANOG:-0.460592071073;SNAI1..3:-0.465447448604;AIRE:-0.472962505845;T:-0.473966385063;DBP:-0.484753480237;TEF:-0.505140951232;JUN:-0.505158683568;ADNP_IRX_SIX_ZHX:-0.522976303346;SPIB:-0.527467641344;PAX4:-0.588744340912;TGIF1:-0.588903588983;ATF2:-0.59283300586;CDC5L:-0.593525932606;NFIL3:-0.608842348737;ELF1,2,4:-0.615842105305;NKX2-1,4:-0.630480914165;HBP1_HMGB_SSRP1_UBTF:-0.648625082006;OCT4_SOX2{dimer}:-0.653345476858;ZEB1:-0.682193043223;GATA4:-0.686759021838;PRDM1:-0.69424039109;SOX2:-0.706131620793;PAX6:-0.742890769903;HOX{A4,D4}:-0.756419884867;TLX2:-0.767059246466;PITX1..3:-0.792081551189;FOXP3:-0.792387384033;HIF1A:-0.816103273848;IRF1,2:-0.841510425591;FOX{D1,D2}:-0.85251321385;CDX1,2,4:-0.853417011344;MAFB:-0.864657939444;FOXO1,3,4:-0.866724787008;IRF7:-0.871600573778;EVI1:-0.878943514171;ATF5_CREB3:-0.905445714422;FOXA2:-0.907747072873;RFX2..5_RFXANK_RFXAP:-0.92682512945;PAX2:-0.932200164283;DMAP1_NCOR{1,2}_SMARC:-0.942639504806;NKX6-1,2:-0.977255743723;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.02455400912;HSF1,2:-1.07361644255;SREBF1,2:-1.07432878486;FOXM1:-1.0754424274;ALX1:-1.12412290867;FOXP1:-1.13285203942;SMAD1..7,9:-1.13407465457;BPTF:-1.19288642352;NKX3-2:-1.21335786677;RBPJ:-1.29414480061;PDX1:-1.31085114066;HMGA1,2:-1.48745099724;IKZF2:-1.90877199914;ZBTB16:-1.96462020608;FOXN1:-2.15546703955 | |top_motifs=GTF2A1,2:1.88319841324;ZNF423:1.6818799586;TFAP4:1.67237905067;ESR1:1.536207049;ZNF238:1.53194260401;POU2F1..3:1.44316162061;XCPE1{core}:1.402022846;EBF1:1.320322602;SP1:1.17538765223;RXR{A,B,G}:1.16292902005;PBX1:1.07178223291;PATZ1:1.07094855925;NR5A1,2:1.03589606606;GLI1..3:1.0261479524;TFAP2{A,C}:0.999546902406;TFCP2:0.949873924412;GZF1:0.922634976702;ZIC1..3:0.897708154861;TAL1_TCF{3,4,12}:0.897689989086;HOX{A5,B5}:0.890312274165;ZNF148:0.872123218811;bHLH_family:0.840076089329;TLX1..3_NFIC{dimer}:0.801723953713;TFAP2B:0.777435980212;ALX4:0.747591321582;NFY{A,B,C}:0.727464230305;CEBPA,B_DDIT3:0.717577315991;TEAD1:0.70135205419;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.670559682472;GTF2I:0.644069072119;GFI1B:0.639916266916;HIC1:0.632636721909;GFI1:0.600372085306;NANOG{mouse}:0.574380034764;MZF1:0.573657396649;MTF1:0.5657974861;ZNF143:0.556525167788;TFDP1:0.539271733045;NR1H4:0.524599941535;YY1:0.491823176954;LHX3,4:0.464689729845;AR:0.461969050511;TOPORS:0.456187869073;EGR1..3:0.450091595387;RREB1:0.448126553165;NR3C1:0.431476192284;PAX5:0.417547635847;IKZF1:0.416977853028;ZBTB6:0.399373772998;MAZ:0.357690187308;POU5F1:0.354726423924;TBX4,5:0.342238764114;NR6A1:0.3236268043;RXRA_VDR{dimer}:0.32242726099;STAT5{A,B}:0.308506917372;SOX5:0.305265449813;SOX{8,9,10}:0.303733621375;HES1:0.30135870784;NFE2L2:0.301235238314;HNF4A_NR2F1,2:0.295033705464;SOX17:0.278434133816;XBP1:0.265833533745;FOX{I1,J2}:0.261453862185;TBP:0.25945648692;NFE2L1:0.256500211563;LEF1_TCF7_TCF7L1,2:0.245965904234;E2F1..5:0.230939172328;NKX3-1:0.23031051906;SRF:0.225849537615;REST:0.195266034735;TP53:0.1823538901;PAX8:0.152697426961;NKX2-3_NKX2-5:0.0820961398442;KLF4:0.0803040157467;SPZ1:0.0644073606976;NFE2:0.0562303293914;ATF6:0.0455832751802;PAX1,9:0.0263150006102;FOXD3:0.0100775171391;UFEwm:0.0067875744294;HNF1A:0.00140839814713;FOS_FOS{B,L1}_JUN{B,D}:-0.00620684009826;HAND1,2:-0.00621208698612;HLF:-0.0265228831727;BACH2:-0.0279184849064;MYBL2:-0.0302739751951;NKX2-2,8:-0.0396800381951;MED-1{core}:-0.0472643284175;ELK1,4_GABP{A,B1}:-0.0505234297416;CRX:-0.063610217744;RORA:-0.0669451871603;MYOD1:-0.0808639901399;NFIX:-0.0819412876568;ATF4:-0.0830921955153;ESRRA:-0.0871210461793;RFX1:-0.0892226775238;ONECUT1,2:-0.108103005461;MYB:-0.116315520798;LMO2:-0.132059164195;HMX1:-0.147143274304;NFATC1..3:-0.16784581846;EN1,2:-0.168242472254;HOXA9_MEIS1:-0.185385911025;FOSL2:-0.186849289157;NRF1:-0.189248054777;FOXQ1:-0.197316539805;NHLH1,2:-0.205968959929;PAX3,7:-0.249950913139;GCM1,2:-0.250304340063;POU3F1..4:-0.250754637756;POU1F1:-0.255358839349;HOX{A6,A7,B6,B7}:-0.263292028703;MEF2{A,B,C,D}:-0.278758954815;ZNF384:-0.308979880795;FOXL1:-0.314092159228;ARID5B:-0.316102641587;NFKB1_REL_RELA:-0.316418221153;PRRX1,2:-0.318359376457;FOX{F1,F2,J1}:-0.324083717821;BREu{core}:-0.327698531875;STAT2,4,6:-0.336776264846;MTE{core}:-0.354333251483;RUNX1..3:-0.355422047081;EP300:-0.370393245843;MYFfamily:-0.371923777854;AHR_ARNT_ARNT2:-0.388653273413;POU6F1:-0.393527060639;STAT1,3:-0.396405953163;PPARG:-0.403359293215;CUX2:-0.416624714924;GATA6:-0.419056676394;CREB1:-0.42489341898;ZFP161:-0.429480476118;ETS1,2:-0.433875982767;SPI1:-0.443759414667;VSX1,2:-0.459088590474;NANOG:-0.460592071073;SNAI1..3:-0.465447448604;AIRE:-0.472962505845;T:-0.473966385063;DBP:-0.484753480237;TEF:-0.505140951232;JUN:-0.505158683568;ADNP_IRX_SIX_ZHX:-0.522976303346;SPIB:-0.527467641344;PAX4:-0.588744340912;TGIF1:-0.588903588983;ATF2:-0.59283300586;CDC5L:-0.593525932606;NFIL3:-0.608842348737;ELF1,2,4:-0.615842105305;NKX2-1,4:-0.630480914165;HBP1_HMGB_SSRP1_UBTF:-0.648625082006;OCT4_SOX2{dimer}:-0.653345476858;ZEB1:-0.682193043223;GATA4:-0.686759021838;PRDM1:-0.69424039109;SOX2:-0.706131620793;PAX6:-0.742890769903;HOX{A4,D4}:-0.756419884867;TLX2:-0.767059246466;PITX1..3:-0.792081551189;FOXP3:-0.792387384033;HIF1A:-0.816103273848;IRF1,2:-0.841510425591;FOX{D1,D2}:-0.85251321385;CDX1,2,4:-0.853417011344;MAFB:-0.864657939444;FOXO1,3,4:-0.866724787008;IRF7:-0.871600573778;EVI1:-0.878943514171;ATF5_CREB3:-0.905445714422;FOXA2:-0.907747072873;RFX2..5_RFXANK_RFXAP:-0.92682512945;PAX2:-0.932200164283;DMAP1_NCOR{1,2}_SMARC:-0.942639504806;NKX6-1,2:-0.977255743723;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.02455400912;HSF1,2:-1.07361644255;SREBF1,2:-1.07432878486;FOXM1:-1.0754424274;ALX1:-1.12412290867;FOXP1:-1.13285203942;SMAD1..7,9:-1.13407465457;BPTF:-1.19288642352;NKX3-2:-1.21335786677;RBPJ:-1.29414480061;PDX1:-1.31085114066;HMGA1,2:-1.48745099724;IKZF2:-1.90877199914;ZBTB16:-1.96462020608;FOXN1:-2.15546703955 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11693-123A1;search_select_hide=table117:FF:11693-123A1 | |||
}} | }} | ||
Latest revision as of 18:15, 4 June 2020
| Name: | Trabecular Meshwork Cells, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12124 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12124
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12124
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0889 |
| 10 | 10 | 0.0416 |
| 100 | 100 | 0.436 |
| 101 | 101 | 0.0895 |
| 102 | 102 | 0.895 |
| 103 | 103 | 0.103 |
| 104 | 104 | 0.201 |
| 105 | 105 | 0.243 |
| 106 | 106 | 0.881 |
| 107 | 107 | 0.257 |
| 108 | 108 | 0.372 |
| 109 | 109 | 0.579 |
| 11 | 11 | 0.74 |
| 110 | 110 | 0.397 |
| 111 | 111 | 0.026 |
| 112 | 112 | 0.393 |
| 113 | 113 | 0.214 |
| 114 | 114 | 0.0393 |
| 115 | 115 | 0.294 |
| 116 | 116 | 0.526 |
| 117 | 117 | 0.976 |
| 118 | 118 | 0.639 |
| 119 | 119 | 0.224 |
| 12 | 12 | 0.775 |
| 120 | 120 | 0.354 |
| 121 | 121 | 0.806 |
| 122 | 122 | 0.589 |
| 123 | 123 | 2.97115e-4 |
| 124 | 124 | 0.148 |
| 125 | 125 | 0.178 |
| 126 | 126 | 0.872 |
| 127 | 127 | 0.405 |
| 128 | 128 | 0.668 |
| 129 | 129 | 0.549 |
| 13 | 13 | 0.591 |
| 130 | 130 | 0.00993 |
| 131 | 131 | 0.75 |
| 132 | 132 | 0.228 |
| 133 | 133 | 0.142 |
| 134 | 134 | 0.832 |
| 135 | 135 | 0.145 |
| 136 | 136 | 0.203 |
| 137 | 137 | 0.00981 |
| 138 | 138 | 0.0974 |
| 139 | 139 | 0.0126 |
| 14 | 14 | 0.623 |
| 140 | 140 | 0.294 |
| 141 | 141 | 0.272 |
| 142 | 142 | 0.193 |
| 143 | 143 | 0.466 |
| 144 | 144 | 0.939 |
| 145 | 145 | 0.929 |
| 146 | 146 | 0.283 |
| 147 | 147 | 0.997 |
| 148 | 148 | 0.0544 |
| 149 | 149 | 0.965 |
| 15 | 15 | 0.0925 |
| 150 | 150 | 0.275 |
| 151 | 151 | 0.95 |
| 152 | 152 | 0.0693 |
| 153 | 153 | 0.315 |
| 154 | 154 | 0.0772 |
| 155 | 155 | 0.298 |
| 156 | 156 | 0.845 |
| 157 | 157 | 0.617 |
| 158 | 158 | 0.0329 |
| 159 | 159 | 0.988 |
| 16 | 16 | 0.999 |
| 160 | 160 | 0.332 |
| 161 | 161 | 0.764 |
| 162 | 162 | 0.0933 |
| 163 | 163 | 0.696 |
| 164 | 164 | 0.708 |
| 165 | 165 | 0.0158 |
| 166 | 166 | 0.815 |
| 167 | 167 | 0.0391 |
| 168 | 168 | 0.756 |
| 169 | 169 | 0.295 |
| 17 | 17 | 0.99 |
| 18 | 18 | 0.862 |
| 19 | 19 | 0.361 |
| 2 | 2 | 0.462 |
| 20 | 20 | 0.994 |
| 21 | 21 | 0.679 |
| 22 | 22 | 0.216 |
| 23 | 23 | 0.388 |
| 24 | 24 | 0.746 |
| 25 | 25 | 0.0643 |
| 26 | 26 | 0.427 |
| 27 | 27 | 0.917 |
| 28 | 28 | 0.106 |
| 29 | 29 | 0.602 |
| 3 | 3 | 0.346 |
| 30 | 30 | 0.163 |
| 31 | 31 | 0.627 |
| 32 | 32 | 0.0034 |
| 33 | 33 | 0.654 |
| 34 | 34 | 0.324 |
| 35 | 35 | 0.268 |
| 36 | 36 | 0.197 |
| 37 | 37 | 0.932 |
| 38 | 38 | 0.744 |
| 39 | 39 | 0.916 |
| 4 | 4 | 0.969 |
| 40 | 40 | 0.287 |
| 41 | 41 | 0.146 |
| 42 | 42 | 0.263 |
| 43 | 43 | 0.48 |
| 44 | 44 | 0.425 |
| 45 | 45 | 0.238 |
| 46 | 46 | 0.673 |
| 47 | 47 | 0.803 |
| 48 | 48 | 0.641 |
| 49 | 49 | 0.223 |
| 5 | 5 | 0.095 |
| 50 | 50 | 0.366 |
| 51 | 51 | 0.989 |
| 52 | 52 | 0.629 |
| 53 | 53 | 0.221 |
| 54 | 54 | 0.865 |
| 55 | 55 | 0.449 |
| 56 | 56 | 0.788 |
| 57 | 57 | 0.262 |
| 58 | 58 | 0.0254 |
| 59 | 59 | 0.147 |
| 6 | 6 | 0.519 |
| 60 | 60 | 0.396 |
| 61 | 61 | 0.895 |
| 62 | 62 | 0.021 |
| 63 | 63 | 0.999 |
| 64 | 64 | 0.665 |
| 65 | 65 | 0.567 |
| 66 | 66 | 0.275 |
| 67 | 67 | 0.353 |
| 68 | 68 | 0.0124 |
| 69 | 69 | 0.316 |
| 7 | 7 | 0.172 |
| 70 | 70 | 0.563 |
| 71 | 71 | 0.0948 |
| 72 | 72 | 0.364 |
| 73 | 73 | 0.0151 |
| 74 | 74 | 0.385 |
| 75 | 75 | 0.768 |
| 76 | 76 | 0.318 |
| 77 | 77 | 0.534 |
| 78 | 78 | 0.35 |
| 79 | 79 | 0.782 |
| 8 | 8 | 0.982 |
| 80 | 80 | 0.589 |
| 81 | 81 | 0.375 |
| 82 | 82 | 0.209 |
| 83 | 83 | 0.44 |
| 84 | 84 | 0.866 |
| 85 | 85 | 0.599 |
| 86 | 86 | 0.823 |
| 87 | 87 | 0.0919 |
| 88 | 88 | 0.361 |
| 89 | 89 | 0.927 |
| 9 | 9 | 0.379 |
| 90 | 90 | 0.00369 |
| 91 | 91 | 0.368 |
| 92 | 92 | 0.203 |
| 93 | 93 | 0.275 |
| 94 | 94 | 0.251 |
| 95 | 95 | 0.196 |
| 96 | 96 | 0.337 |
| 97 | 97 | 0.963 |
| 98 | 98 | 0.67 |
| 99 | 99 | 0.00332 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12124
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0002367 (trabecular meshwork cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000970 (eye)
0000019 (camera-type eye)
0000033 (head)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000020 (sense organ)
0002203 (vasculature of eye)
0001768 (uvea)
0001032 (sensory system)
0002049 (vasculature)
0002200 (vasculature of head)
0006876 (vasculature of organ)
0010317 (germ layer / neural crest derived structure)
0007798 (vascular system)
0005969 (reticulum trabeculare)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0004535 (cardiovascular system)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0010230 (eyeball of camera-type eye)
0001009 (circulatory system)
0003956 (aqueous drainage system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000188 (human trabecular meshwork cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)
