FFCP PHASE1:Hg19::chr10:5566916..5566932,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=810 | |EntrezGene=810 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1452 | |HGNC=1452 | ||
|TSSclassifier=strong | |||
|UniProt=P27482 | |UniProt=P27482 | ||
|association_with_transcript=0bp_to_ENST00000315238,NM_005185,uc001iie.1_5end | |association_with_transcript=0bp_to_ENST00000315238,NM_005185,uc001iie.1_5end | ||
|cluster_id=chr10:5566916..5566932,+ | |||
|coexpression_cluster_id=C3027 | |||
|description=CAGE_peak_1_at_CALML3_5end | |description=CAGE_peak_1_at_CALML3_5end | ||
|id=chr10:5566916..5566932,+ | |id=chr10:5566916..5566932,+ | ||
|ontology_enrichment_celltype=CL:0002076!6.42e-20!43;CL:0002159!9.70e-14!13;CL:0000223!1.63e-12!59;CL:0002368!2.76e-12!13;CL:0002251!9.50e-12!21;CL:0000622!4.29e-09!5;CL:0000154!1.72e-07!6;CL:0000244!1.82e-07!4;CL:0000731!1.82e-07!4;CL:0002621!3.06e-07!3;CL:0000066!4.30e-07!254;CL:0002202!4.71e-07!9;CL:0002632!4.71e-07!9;CL:0002077!5.14e-07!33;CL:0002166!9.90e-07!3 | |ontology_enrichment_celltype=CL:0002076!6.42e-20!43;CL:0002159!9.70e-14!13;CL:0000223!1.63e-12!59;CL:0002368!2.76e-12!13;CL:0002251!9.50e-12!21;CL:0000622!4.29e-09!5;CL:0000154!1.72e-07!6;CL:0000244!1.82e-07!4;CL:0000731!1.82e-07!4;CL:0002621!3.06e-07!3;CL:0000066!4.30e-07!254;CL:0002202!4.71e-07!9;CL:0002632!4.71e-07!9;CL:0002077!5.14e-07!33;CL:0002166!9.90e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.40e-18;42!CL:0002159;1.01e-17;14!CL:0002368;3.52e-17;13!CL:0002251;4.80e-11;20!CL:0000244;6.54e-10;4!CL:0000731;6.54e-10;4!CL:0002202;9.89e-10;9!CL:0002632;9.89e-10;9!CL:0002621;1.37e-09;3!CL:0002166;7.17e-09;3!CL:0002077;9.12e-09;34!CL:0000622;1.87e-08;5!CL:0002328;1.93e-08;3!CL:0000307;3.30e-08;3!CL:0000362;2.19e-07;9!CL:0002327;3.06e-07;4!CL:0000240;4.36e-07;6!CL:0000311;4.36e-07;6!CL:0000079;4.36e-07;6!CL:0000237;4.36e-07;6!CL:0000154;4.85e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.13e-23,42;CL:0002159,1.02e-17,14;CL:0002368,3.59e-17,13;CL:0000223,1.69e-15,58;CL:0000066,2.50e-11,253;CL:0002251,4.83e-11,20;CL:0002077,2.44e-10,34;CL:0000244,6.62e-10,4;CL:0000731,6.62e-10,4;CL:0002202,9.89e-10,9;CL:0002632,9.89e-10,9;CL:0002621,1.37e-09,3;CL:0002166,7.17e-09,3;CL:0000622,1.85e-08,5;CL:0002328,1.88e-08,3;CL:0000068,3.39e-08,3;CL:0000069,3.39e-08,3;CL:0000307,3.39e-08,3;CL:0000377,3.39e-08,3;CL:0000362,2.20e-07,9;CL:0002327,3.06e-07,4;CL:0000240,4.36e-07,6;CL:0000311,4.36e-07,6;CL:0000079,4.36e-07,6;CL:0000237,4.36e-07,6;CL:0000036,4.36e-07,6;CL:0000357,4.36e-07,6;CL:0000114,4.36e-07,6;CL:0000154,4.81e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;2.93e-09;58!CL:0000377;3.30e-08;3!CL:0000357;4.36e-07;6!CL:0000114;4.36e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;4.29e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.19e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000166!2.19e-17!21;UBERON:0001004!2.44e-16!72;UBERON:0000165!2.10e-15!28;UBERON:0000930!2.10e-15!28;UBERON:0000161!7.92e-15!35;UBERON:0004119!8.31e-12!169;UBERON:0000925!8.31e-12!169;UBERON:0006595!8.31e-12!169;UBERON:0003102!2.56e-11!95;UBERON:0003408!7.21e-11!10;UBERON:0001044!1.64e-10!6;UBERON:0003293!1.64e-10!6;UBERON:0003294!1.64e-10!6;UBERON:0010047!1.64e-10!6;UBERON:0000167!1.64e-10!6;UBERON:0000078!3.04e-10!18;UBERON:0001444!2.52e-09!48;UBERON:0000974!9.71e-09!10;UBERON:0000153!1.88e-08!129;UBERON:0007811!1.88e-08!129;UBERON:0006562!5.02e-08!11;UBERON:0000065!8.57e-08!53;UBERON:0001007!1.32e-07!155;UBERON:0001555!1.32e-07!155;UBERON:0007026!1.32e-07!155;UBERON:0007196!2.54e-07!14;UBERON:0001558!2.54e-07!14;UBERON:0001949!3.06e-07!3;UBERON:0001042!7.15e-07!10;UBERON:0009145!7.15e-07!10;UBERON:0001723!8.35e-07!3;UBERON:0001033!8.35e-07!3;UBERON:0010056!8.35e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;7.89e-18;28!UBERON:0000161;1.30e-17;19!UBERON:0000166;1.30e-17;19!UBERON:0000974;1.18e-10;6!UBERON:0001044;2.04e-10;6!UBERON:0003293;2.04e-10;6!UBERON:0003294;2.04e-10;6!UBERON:0010047;2.04e-10;6!UBERON:0003408;2.04e-10;6!UBERON:0000167;2.04e-10;6!UBERON:0000153;7.12e-10;54!UBERON:0000486;7.16e-10;12!UBERON:0007196;1.36e-09;15!UBERON:0001558;1.36e-09;15!UBERON:0001949;1.37e-09;3!UBERON:0007811;1.40e-09;52!UBERON:0003729;2.85e-09;13!UBERON:0001723;5.57e-09;3!UBERON:0001033;5.57e-09;3!UBERON:0003126;7.79e-09;7!UBERON:0001005;7.79e-09;7!UBERON:0004815;1.93e-08;3!UBERON:0002031;1.93e-08;3!UBERON:0001004;2.98e-08;65!UBERON:0001041;3.79e-08;14!UBERON:0000033;5.40e-08;50!UBERON:0000365;6.17e-08;5!UBERON:0000344;2.14e-07;20!UBERON:0001911;3.06e-07;4!UBERON:0001444;6.59e-07;48!UBERON:0001708;9.91e-07;4!UBERON:0008895;9.91e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.76e-23,74;UBERON:0000166,9.38e-21,22;UBERON:0000153,3.28e-20,62;UBERON:0007811,3.28e-20,62;UBERON:0003102,1.84e-17,99;UBERON:0000161,3.40e-17,36;UBERON:0000165,4.42e-17,29;UBERON:0000930,4.42e-17,29;UBERON:0000033,1.83e-15,56;UBERON:0004119,7.44e-15,160;UBERON:0000925,7.44e-15,160;UBERON:0006595,7.44e-15,160;UBERON:0000065,3.33e-12,54;UBERON:0000974,3.89e-12,10;UBERON:0003408,6.10e-12,10;UBERON:0001444,1.78e-11,49;UBERON:0001044,2.02e-10,6;UBERON:0003293,2.02e-10,6;UBERON:0003294,2.02e-10,6;UBERON:0010047,2.02e-10,6;UBERON:0000167,2.02e-10,6;UBERON:0001007,9.13e-10,145;UBERON:0001555,9.13e-10,145;UBERON:0007026,9.13e-10,145;UBERON:0001041,1.18e-09,87;UBERON:0007196,1.37e-09,15;UBERON:0001558,1.37e-09,15;UBERON:0001949,1.37e-09,3;UBERON:0001042,1.41e-09,10;UBERON:0009145,1.41e-09,10;UBERON:0003729,2.85e-09,13;UBERON:0001723,5.64e-09,3;UBERON:0001033,5.64e-09,3;UBERON:0010056,5.64e-09,3;UBERON:0000072,6.87e-09,47;UBERON:0003126,8.07e-09,7;UBERON:0001005,8.07e-09,7;UBERON:0006562,1.25e-08,11;UBERON:0008814,1.61e-08,18;UBERON:0004815,1.88e-08,3;UBERON:0002031,1.88e-08,3;UBERON:0000365,6.23e-08,5;UBERON:0004921,7.24e-08,118;UBERON:0000344,2.14e-07,20;UBERON:0001911,3.06e-07,4;UBERON:0005333,3.06e-07,4;UBERON:0008425,3.06e-07,4;UBERON:0005311,3.06e-07,4;UBERON:0005178,8.79e-07,34;UBERON:0002224,8.79e-07,34;UBERON:0001708,9.91e-07,4;UBERON:0008895,9.91e-07,4 | |||
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|short_description=p1@CALML3 | |short_description=p1@CALML3 | ||
}} | }} |
Latest revision as of 13:18, 18 September 2015
Short description: | p1@CALML3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CALML3_5end |
Coexpression cluster: | C3027_Mammary_keratoacanthoma_Gingival_Prostate_tongue_esophagus_oral |
Association with transcript: | 0bp_to_ENST00000315238, NM_005185, uc001iie.1_5end |
EntrezGene: | CALML3 |
HGNC: | 1452 |
UniProt: | P27482 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.19e-08 | 14 |