FFCP PHASE1:Mm9::chr2:178362498..178362505,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=84|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:178362498..178362505,-|id=chr2:178362498..178362505,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002374,1.10e-29,1;CL:0000202,1.10e-29,1;CL:0000199,1.10e-29,1;CL:0000855,1.10e-29,1;CL:0000589,1.10e-29,1;CL:0000197,1.33e-15,2;CL:0002491,1.33e-15,2;CL:0000098,1.33e-15,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.55e-20!23;UBERON:0000974!4.55e-20!23;UBERON:0004807!4.55e-20!23;UBERON:0005058!4.55e-20!23;UBERON:0003351!4.55e-20!23;UBERON:0009113!4.55e-20!23;UBERON:0003295!4.55e-20!23;UBERON:0009722!4.55e-20!23;UBERON:0005562!4.55e-20!23;UBERON:0007690!4.55e-20!23;UBERON:0006562!3.84e-19!24;UBERON:0003408!3.84e-19!24;UBERON:0001557!3.84e-19!24;UBERON:0001042!3.84e-19!24;UBERON:0008814!3.84e-19!24;UBERON:0009145!3.84e-19!24;UBERON:0000072!8.93e-17!27;UBERON:0004177!1.81e-15!29;UBERON:0002368!1.60e-12!60;UBERON:0000063!1.91e-12!35;UBERON:0002530!2.54e-11!65;UBERON:0000153!1.75e-10!94;UBERON:0007811!2.28e-10!86;UBERON:0000065!2.62e-10!41;UBERON:0001004!5.19e-10!42;UBERON:0000949!6.36e-10!72;UBERON:0002390!3.36e-09!45;UBERON:0003061!3.36e-09!45;UBERON:0002193!1.72e-08!48;UBERON:0000007!5.24e-08!8;UBERON:0003296!5.24e-08!8;UBERON:0010133!5.24e-08!8;UBERON:0005057!7.26e-08!51;UBERON:0003929!3.87e-07!55;UBERON:0000490!8.91e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.23e-15,8;UBERON:0003296,1.23e-15,8;UBERON:0010133,1.23e-15,8;UBERON:0004766,1.33e-15,2;UBERON:0008193,1.33e-15,2;UBERON:0005913,1.33e-15,2;UBERON:0011158,1.33e-15,2;UBERON:0005744,1.33e-15,2;UBERON:0003457,1.33e-15,2;UBERON:0008001,1.33e-15,2;UBERON:0007497,1.33e-15,2;UBERON:0009955,1.33e-15,2;UBERON:0003067,1.33e-15,2;UBERON:0002546,1.33e-15,2;UBERON:0007914,1.33e-15,2;UBERON:0005253,1.33e-15,2;UBERON:0002227,1.33e-15,2;UBERON:0001846,1.33e-15,2;UBERON:0004339,1.33e-15,2;UBERON:0002105,1.33e-15,2;UBERON:0001678,1.33e-15,2;UBERON:0003128,1.33e-15,2;UBERON:0001694,1.33e-15,2;UBERON:0004681,1.33e-15,2;UBERON:0001839,1.33e-15,2;UBERON:0001690,1.33e-15,2;UBERON:0001844,1.33e-15,2;UBERON:0001849,1.33e-15,2;UBERON:0002499,1.33e-15,2;UBERON:0001855,1.33e-15,2;UBERON:0011137,1.33e-15,2;UBERON:0001703,1.33e-15,2;UBERON:0010323,1.33e-15,2;UBERON:0003129,1.33e-15,2;UBERON:0003069,1.33e-15,2;UBERON:0003051,1.33e-15,2;UBERON:0004637,1.33e-15,2;UBERON:0004761,1.33e-15,2;UBERON:0010113,1.33e-15,2;UBERON:0009123,1.33e-15,2;UBERON:0010351,1.33e-15,2;UBERON:0009617,1.33e-15,2;UBERON:0005641,1.33e-15,2;UBERON:0010349,1.33e-15,2;UBERON:0001894,9.45e-13,10;UBERON:0006222,9.45e-13,10|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7874732978144,0,0,0,0,0.535106452806212,0.493647061806363,2.13125464380219,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616265742988964,0.649604114888975,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0.288635524920988,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr2:178362498..178362505,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=84 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:178362498..178362505,- | |||
|id=chr2:178362498..178362505,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002374,1.10e-29,1;CL:0000202,1.10e-29,1;CL:0000199,1.10e-29,1;CL:0000855,1.10e-29,1;CL:0000589,1.10e-29,1;CL:0000197,1.33e-15,2;CL:0002491,1.33e-15,2;CL:0000098,1.33e-15,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.55e-20!23;UBERON:0000974!4.55e-20!23;UBERON:0004807!4.55e-20!23;UBERON:0005058!4.55e-20!23;UBERON:0003351!4.55e-20!23;UBERON:0009113!4.55e-20!23;UBERON:0003295!4.55e-20!23;UBERON:0009722!4.55e-20!23;UBERON:0005562!4.55e-20!23;UBERON:0007690!4.55e-20!23;UBERON:0006562!3.84e-19!24;UBERON:0003408!3.84e-19!24;UBERON:0001557!3.84e-19!24;UBERON:0001042!3.84e-19!24;UBERON:0008814!3.84e-19!24;UBERON:0009145!3.84e-19!24;UBERON:0000072!8.93e-17!27;UBERON:0004177!1.81e-15!29;UBERON:0002368!1.60e-12!60;UBERON:0000063!1.91e-12!35;UBERON:0002530!2.54e-11!65;UBERON:0000153!1.75e-10!94;UBERON:0007811!2.28e-10!86;UBERON:0000065!2.62e-10!41;UBERON:0001004!5.19e-10!42;UBERON:0000949!6.36e-10!72;UBERON:0002390!3.36e-09!45;UBERON:0003061!3.36e-09!45;UBERON:0002193!1.72e-08!48;UBERON:0000007!5.24e-08!8;UBERON:0003296!5.24e-08!8;UBERON:0010133!5.24e-08!8;UBERON:0005057!7.26e-08!51;UBERON:0003929!3.87e-07!55;UBERON:0000490!8.91e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.23e-15,8;UBERON:0003296,1.23e-15,8;UBERON:0010133,1.23e-15,8;UBERON:0004766,1.33e-15,2;UBERON:0008193,1.33e-15,2;UBERON:0005913,1.33e-15,2;UBERON:0011158,1.33e-15,2;UBERON:0005744,1.33e-15,2;UBERON:0003457,1.33e-15,2;UBERON:0008001,1.33e-15,2;UBERON:0007497,1.33e-15,2;UBERON:0009955,1.33e-15,2;UBERON:0003067,1.33e-15,2;UBERON:0002546,1.33e-15,2;UBERON:0007914,1.33e-15,2;UBERON:0005253,1.33e-15,2;UBERON:0002227,1.33e-15,2;UBERON:0001846,1.33e-15,2;UBERON:0004339,1.33e-15,2;UBERON:0002105,1.33e-15,2;UBERON:0001678,1.33e-15,2;UBERON:0003128,1.33e-15,2;UBERON:0001694,1.33e-15,2;UBERON:0004681,1.33e-15,2;UBERON:0001839,1.33e-15,2;UBERON:0001690,1.33e-15,2;UBERON:0001844,1.33e-15,2;UBERON:0001849,1.33e-15,2;UBERON:0002499,1.33e-15,2;UBERON:0001855,1.33e-15,2;UBERON:0011137,1.33e-15,2;UBERON:0001703,1.33e-15,2;UBERON:0010323,1.33e-15,2;UBERON:0003129,1.33e-15,2;UBERON:0003069,1.33e-15,2;UBERON:0003051,1.33e-15,2;UBERON:0004637,1.33e-15,2;UBERON:0004761,1.33e-15,2;UBERON:0010113,1.33e-15,2;UBERON:0009123,1.33e-15,2;UBERON:0010351,1.33e-15,2;UBERON:0009617,1.33e-15,2;UBERON:0005641,1.33e-15,2;UBERON:0010349,1.33e-15,2;UBERON:0001894,9.45e-13,10;UBERON:0006222,9.45e-13,10 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.7874732978144,0,0,0,0,0.535106452806212,0.493647061806363,2.13125464380219,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616265742988964,0.649604114888975,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0.288635524920988,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr2:178362498..178362505,- | |||
}} |
Revision as of 23:10, 13 September 2013
Short description: | p@chr2:178362498..178362505, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:178362498..178362505, - |
Coexpression cluster: | MCL_coexpression_mm9:84 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ear hair cell | 1.10e-29 | 1 |
auditory hair cell | 1.10e-29 | 1 |
mechanoreceptor cell | 1.10e-29 | 1 |
sensory hair cell | 1.10e-29 | 1 |
cochlear inner hair cell | 1.10e-29 | 1 |
receptor cell | 1.33e-15 | 2 |
auditory epithelial cell | 1.33e-15 | 2 |
sensory epithelial cell | 1.33e-15 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.