FFCP PHASE1:Hg19::chr7:35734607..35734664,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!3.39e-14!42;CL:0000860!6.76e-14!45;CL:0000066!1.14e-13!254;CL:0000766!8.37e-13!76;CL:0000223!8.28e-12!59;CL:0000738!6.40e-11!140;CL:0000557!8.66e-10!71;CL:0002076!3.42e-09!43;CL:0002087!1.37e-08!119;CL:0002009!1.74e-08!65;CL:0002031!2.76e-08!124;CL:0000839!2.80e-08!70;CL:0002194!3.13e-08!63;CL:0000576!3.13e-08!63;CL:0000040!3.13e-08!63;CL:0000559!3.13e-08!63;CL:0002032!1.25e-07!165;CL:0000837!1.25e-07!165;CL:0000037!3.79e-07!172;CL:0000566!3.79e-07!172;CL:0000763!4.50e-07!112;CL:0000049!4.50e-07!112 | |ontology_enrichment_celltype=CL:0002057!3.39e-14!42;CL:0000860!6.76e-14!45;CL:0000066!1.14e-13!254;CL:0000766!8.37e-13!76;CL:0000223!8.28e-12!59;CL:0000738!6.40e-11!140;CL:0000557!8.66e-10!71;CL:0002076!3.42e-09!43;CL:0002087!1.37e-08!119;CL:0002009!1.74e-08!65;CL:0002031!2.76e-08!124;CL:0000839!2.80e-08!70;CL:0002194!3.13e-08!63;CL:0000576!3.13e-08!63;CL:0000040!3.13e-08!63;CL:0000559!3.13e-08!63;CL:0002032!1.25e-07!165;CL:0000837!1.25e-07!165;CL:0000037!3.79e-07!172;CL:0000566!3.79e-07!172;CL:0000763!4.50e-07!112;CL:0000049!4.50e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.89e-13;33!CL:0002057;3.89e-13;33!CL:0000473;2.03e-08;39!CL:0000234;2.03e-08;39!CL:0002076;3.47e-08;42!CL:0000576;5.50e-08;48 | |ontology_enrichment_celltype_v019=CL:0000860;3.89e-13;33!CL:0002057;3.89e-13;33!CL:0000473;2.03e-08;39!CL:0000234;2.03e-08;39!CL:0002076;3.47e-08;42!CL:0000576;5.50e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.35e-14,42;CL:0002057,3.35e-14,42;CL:0000066,6.16e-14,253;CL:0000766,2.13e-13,72;CL:0000223,1.49e-12,58;CL:0000738,3.28e-11,136;CL:0000473,6.36e-11,48;CL:0000234,6.36e-11,48;CL:0000557,2.90e-10,67;CL:0002076,6.50e-10,42;CL:0002009,6.26e-09,61;CL:0002087,7.73e-09,115;CL:0002194,1.13e-08,59;CL:0000576,1.13e-08,59;CL:0000040,1.13e-08,59;CL:0000559,1.13e-08,59;CL:0000839,1.15e-08,66;CL:0002031,1.67e-08,120;CL:0002032,8.61e-08,161;CL:0000837,8.61e-08,161;CL:0000037,2.62e-07,168;CL:0000763,2.78e-07,108;CL:0000049,2.78e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.37e-11;42!CL:0000223;1.43e-07;58 | |ontology_enrichment_development_v019=CL:0002057;5.37e-11;42!CL:0000223;1.43e-07;58 | ||
|ontology_enrichment_disease=DOID:305!4.35e-15!106;DOID:0050687!5.14e-11!143 | |ontology_enrichment_disease=DOID:305!4.35e-15!106;DOID:0050687!5.14e-11!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.30e-15,106;DOID:0050687,5.64e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.26e-13!169;UBERON:0000925!2.26e-13!169;UBERON:0006595!2.26e-13!169;UBERON:0004921!8.69e-12!129;UBERON:0004185!8.69e-12!129;UBERON:0002390!1.61e-10!102;UBERON:0003061!1.61e-10!102;UBERON:0001007!1.68e-10!155;UBERON:0001555!1.68e-10!155;UBERON:0007026!1.68e-10!155;UBERON:0005911!8.11e-10!82;UBERON:0002193!4.40e-09!112;UBERON:0000077!4.55e-09!130;UBERON:0001041!1.47e-08!98;UBERON:0005177!1.51e-08!107;UBERON:0002405!7.63e-08!115;UBERON:0002371!1.81e-07!80 | |ontology_enrichment_uberon=UBERON:0004119!2.26e-13!169;UBERON:0000925!2.26e-13!169;UBERON:0006595!2.26e-13!169;UBERON:0004921!8.69e-12!129;UBERON:0004185!8.69e-12!129;UBERON:0002390!1.61e-10!102;UBERON:0003061!1.61e-10!102;UBERON:0001007!1.68e-10!155;UBERON:0001555!1.68e-10!155;UBERON:0007026!1.68e-10!155;UBERON:0005911!8.11e-10!82;UBERON:0002193!4.40e-09!112;UBERON:0000077!4.55e-09!130;UBERON:0001041!1.47e-08!98;UBERON:0005177!1.51e-08!107;UBERON:0002405!7.63e-08!115;UBERON:0002371!1.81e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.52e-11,160;UBERON:0000925,2.52e-11,160;UBERON:0006595,2.52e-11,160;UBERON:0002390,7.26e-11,98;UBERON:0003061,7.26e-11,98;UBERON:0004921,1.58e-10,118;UBERON:0005177,5.79e-10,101;UBERON:0005911,7.52e-10,82;UBERON:0002193,2.40e-09,108;UBERON:0001007,6.94e-09,145;UBERON:0001555,6.94e-09,145;UBERON:0007026,6.94e-09,145;UBERON:0002371,8.99e-08,76;UBERON:0001041,2.16e-07,87 | |||
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| ||
|short_description=p2@HERPUD2 | |short_description=p2@HERPUD2 | ||
}} | }} |
Revision as of 04:05, 16 November 2012
Short description: | p2@HERPUD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HERPUD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000427455_5end |
EntrezGene: | HERPUD2 |
HGNC: | 21915 |
UniProt: | C9JV48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.35e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.35e-14 | 42 |
epithelial cell | 6.16e-14 | 253 |
myeloid leukocyte | 2.13e-13 | 72 |
endodermal cell | 1.49e-12 | 58 |
leukocyte | 3.28e-11 | 136 |
defensive cell | 6.36e-11 | 48 |
phagocyte | 6.36e-11 | 48 |
granulocyte monocyte progenitor cell | 2.90e-10 | 67 |
endo-epithelial cell | 6.50e-10 | 42 |
macrophage dendritic cell progenitor | 6.26e-09 | 61 |
nongranular leukocyte | 7.73e-09 | 115 |
monopoietic cell | 1.13e-08 | 59 |
monocyte | 1.13e-08 | 59 |
monoblast | 1.13e-08 | 59 |
promonocyte | 1.13e-08 | 59 |
myeloid lineage restricted progenitor cell | 1.15e-08 | 66 |
hematopoietic lineage restricted progenitor cell | 1.67e-08 | 120 |
hematopoietic oligopotent progenitor cell | 8.61e-08 | 161 |
hematopoietic multipotent progenitor cell | 8.61e-08 | 161 |
hematopoietic stem cell | 2.62e-07 | 168 |
myeloid cell | 2.78e-07 | 108 |
common myeloid progenitor | 2.78e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.52e-11 | 160 |
endoderm | 2.52e-11 | 160 |
presumptive endoderm | 2.52e-11 | 160 |
hematopoietic system | 7.26e-11 | 98 |
blood island | 7.26e-11 | 98 |
subdivision of digestive tract | 1.58e-10 | 118 |
trunk region element | 5.79e-10 | 101 |
endo-epithelium | 7.52e-10 | 82 |
hemolymphoid system | 2.40e-09 | 108 |
digestive system | 6.94e-09 | 145 |
digestive tract | 6.94e-09 | 145 |
primitive gut | 6.94e-09 | 145 |
bone marrow | 8.99e-08 | 76 |
foregut | 2.16e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.30e-15 | 106 |
cell type cancer | 5.64e-11 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.