FFCP PHASE1:Hg19::chr12:52908868..52908889,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=141bp_to_CU687195_5end|coexpression_cluster_id=C207|description=CAGE_peak_4_at_CU687195_5end|id=chr12:52908868..52908889,+|ontology_enrichment_celltype=CL:0002076!4.16e-27!43;CL:0002368!2.29e-20!13;CL:0000223!5.96e-20!59;CL:0000066!1.86e-17!254;CL:0000244!3.02e-12!4;CL:0000731!3.02e-12!4;CL:0002251!5.04e-12!21;CL:0002202!3.30e-11!9;CL:0002632!3.30e-11!9;CL:0002159!4.72e-11!13;CL:0002328!1.35e-09!3;CL:0000068!2.70e-09!3;CL:0000069!2.70e-09!3;CL:0000307!2.70e-09!3;CL:0000377!2.70e-09!3;CL:0002621!2.78e-09!3;CL:0000076!3.96e-09!62;CL:0002327!1.27e-07!4;CL:0000575!1.44e-07!2|ontology_enrichment_celltype_v019=CL:0002159;6.18e-20;14!CL:0002076;2.03e-16;42!CL:0002327;9.65e-14;4!CL:0000575;2.74e-13;2!CL:0000622;1.06e-10;5!CL:0002368;1.51e-10;13!CL:0002077;2.08e-10;34!CL:0002202;3.88e-10;9!CL:0002632;3.88e-10;9!CL:0002251;7.89e-10;20!CL:0000240;1.16e-09;6!CL:0000311;1.16e-09;6!CL:0000079;1.16e-09;6!CL:0000237;1.16e-09;6!CL:0000154;5.34e-09;6!CL:0002577;7.78e-09;3!CL:0002166;1.08e-08;3!CL:0002231;1.50e-08;3!CL:0002623;1.53e-08;3!CL:0002328;2.11e-08;3!CL:0000307;2.11e-08;3!CL:0002252;2.10e-07;1!CL:0002336;3.01e-07;1!CL:0002261;3.01e-07;1!CL:0002170;3.01e-07;1!CL:0000244;4.51e-07;4!CL:0000731;4.51e-07;4|ontology_enrichment_celltype_v019_2=CL:0002076,3.83e-20,42;CL:0002159,6.64e-20,14;CL:0000066,4.26e-16,253;CL:0000223,7.14e-14,58;CL:0002327,1.03e-13,4;CL:0000575,2.91e-13,2;CL:0002077,1.94e-12,34;CL:0000622,9.56e-11,5;CL:0002368,1.47e-10,13;CL:0002202,4.18e-10,9;CL:0002632,4.18e-10,9;CL:0002251,7.58e-10,20;CL:0000240,1.12e-09,6;CL:0000311,1.12e-09,6;CL:0000079,1.12e-09,6;CL:0000237,1.12e-09,6;CL:0000036,1.12e-09,6;CL:0000357,1.12e-09,6;CL:0000114,1.12e-09,6;CL:0000154,4.91e-09,6;CL:0002577,5.92e-09,3;CL:0002166,1.29e-08,3;CL:0002231,1.39e-08,3;CL:0002623,1.50e-08,3;CL:0002328,1.81e-08,3;CL:0000068,2.75e-08,3;CL:0000069,2.75e-08,3;CL:0000307,2.75e-08,3;CL:0000377,2.75e-08,3;CL:0002252,1.98e-07,1;CL:0002336,2.84e-07,1;CL:0002261,2.84e-07,1;CL:0002170,2.84e-07,1;CL:0002321,3.24e-07,250;CL:0000244,4.58e-07,4;CL:0000731,4.58e-07,4|ontology_enrichment_development_v019=CL:0000357;1.16e-09;6!CL:0000114;1.16e-09;6!CL:0000223;5.12e-09;58!CL:0000377;2.11e-08;3|ontology_enrichment_disease=DOID:1749!4.30e-11!14|ontology_enrichment_disease_v019=DOID:3151;2.10e-07;1!DOID:3149;2.10e-07;1|ontology_enrichment_disease_v019_2=DOID:3151,2.10e-07,1;DOID:3149,2.10e-07,1|ontology_enrichment_uberon=UBERON:0000166!6.37e-17!21;UBERON:0001004!2.95e-16!72;UBERON:0000161!1.05e-14!35;UBERON:0000365!2.09e-14!5;UBERON:0000165!2.36e-14!28;UBERON:0000930!2.36e-14!28;UBERON:0004119!1.67e-13!169;UBERON:0000925!1.67e-13!169;UBERON:0006595!1.67e-13!169;UBERON:0005910!6.03e-12!6;UBERON:0001444!1.84e-11!48;UBERON:0003102!2.44e-10!95;UBERON:0004815!1.35e-09!3;UBERON:0002031!1.35e-09!3;UBERON:0003729!2.06e-09!5;UBERON:0001949!2.78e-09!3;UBERON:0007196!4.20e-09!14;UBERON:0001558!4.20e-09!14;UBERON:0000065!2.28e-08!53;UBERON:0000344!9.34e-08!12;UBERON:0001911!1.27e-07!4;UBERON:0005333!1.27e-07!4;UBERON:0008425!1.27e-07!4;UBERON:0005311!1.27e-07!4;UBERON:0002185!2.78e-07!4;UBERON:0003343!8.63e-07!4;UBERON:0004785!8.63e-07!4|ontology_enrichment_uberon_v019=UBERON:0001911;9.65e-14;4!UBERON:0000165;5.29e-09;28!UBERON:0004815;2.11e-08;3!UBERON:0002031;2.11e-08;3!UBERON:0001723;2.96e-08;3!UBERON:0001033;2.96e-08;3!UBERON:0000964;4.71e-07;4!UBERON:0010409;4.71e-07;4!UBERON:0001987;7.97e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.03e-13,4;UBERON:0005333,1.03e-13,4;UBERON:0008425,1.03e-13,4;UBERON:0005311,1.03e-13,4;UBERON:0003102,3.51e-13,99;UBERON:0000033,2.81e-10,56;UBERON:0000153,4.34e-09,62;UBERON:0007811,4.34e-09,62;UBERON:0000161,8.53e-09,36;UBERON:0004119,9.13e-09,160;UBERON:0000925,9.13e-09,160;UBERON:0006595,9.13e-09,160;UBERON:0000165,1.21e-08,29;UBERON:0000930,1.21e-08,29;UBERON:0000166,1.34e-08,22;UBERON:0005157,1.59e-08,47;UBERON:0004815,1.81e-08,3;UBERON:0002031,1.81e-08,3;UBERON:0001723,3.57e-08,3;UBERON:0001033,3.57e-08,3;UBERON:0010056,3.57e-08,3;UBERON:0001444,5.66e-08,49;UBERON:0000076,4.37e-07,8;UBERON:0001004,4.58e-07,74;UBERON:0000964,4.85e-07,4;UBERON:0010409,4.85e-07,4;UBERON:0004348,4.85e-07,4;UBERON:0005427,4.85e-07,4;UBERON:0001987,6.51e-07,4;UBERON:0004340,6.51e-07,4;UBERON:0005153,9.75e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,2.71085326900425,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00724817121796,12.977455497455,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=141bp_to_CU687195_5end | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_4_at_CU687195_5end | |||
|id=chr12:52908868..52908889,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.16e-27!43;CL:0002368!2.29e-20!13;CL:0000223!5.96e-20!59;CL:0000066!1.86e-17!254;CL:0000244!3.02e-12!4;CL:0000731!3.02e-12!4;CL:0002251!5.04e-12!21;CL:0002202!3.30e-11!9;CL:0002632!3.30e-11!9;CL:0002159!4.72e-11!13;CL:0002328!1.35e-09!3;CL:0000068!2.70e-09!3;CL:0000069!2.70e-09!3;CL:0000307!2.70e-09!3;CL:0000377!2.70e-09!3;CL:0002621!2.78e-09!3;CL:0000076!3.96e-09!62;CL:0002327!1.27e-07!4;CL:0000575!1.44e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002159;6.18e-20;14!CL:0002076;2.03e-16;42!CL:0002327;9.65e-14;4!CL:0000575;2.74e-13;2!CL:0000622;1.06e-10;5!CL:0002368;1.51e-10;13!CL:0002077;2.08e-10;34!CL:0002202;3.88e-10;9!CL:0002632;3.88e-10;9!CL:0002251;7.89e-10;20!CL:0000240;1.16e-09;6!CL:0000311;1.16e-09;6!CL:0000079;1.16e-09;6!CL:0000237;1.16e-09;6!CL:0000154;5.34e-09;6!CL:0002577;7.78e-09;3!CL:0002166;1.08e-08;3!CL:0002231;1.50e-08;3!CL:0002623;1.53e-08;3!CL:0002328;2.11e-08;3!CL:0000307;2.11e-08;3!CL:0002252;2.10e-07;1!CL:0002336;3.01e-07;1!CL:0002261;3.01e-07;1!CL:0002170;3.01e-07;1!CL:0000244;4.51e-07;4!CL:0000731;4.51e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.83e-20,42;CL:0002159,6.64e-20,14;CL:0000066,4.26e-16,253;CL:0000223,7.14e-14,58;CL:0002327,1.03e-13,4;CL:0000575,2.91e-13,2;CL:0002077,1.94e-12,34;CL:0000622,9.56e-11,5;CL:0002368,1.47e-10,13;CL:0002202,4.18e-10,9;CL:0002632,4.18e-10,9;CL:0002251,7.58e-10,20;CL:0000240,1.12e-09,6;CL:0000311,1.12e-09,6;CL:0000079,1.12e-09,6;CL:0000237,1.12e-09,6;CL:0000036,1.12e-09,6;CL:0000357,1.12e-09,6;CL:0000114,1.12e-09,6;CL:0000154,4.91e-09,6;CL:0002577,5.92e-09,3;CL:0002166,1.29e-08,3;CL:0002231,1.39e-08,3;CL:0002623,1.50e-08,3;CL:0002328,1.81e-08,3;CL:0000068,2.75e-08,3;CL:0000069,2.75e-08,3;CL:0000307,2.75e-08,3;CL:0000377,2.75e-08,3;CL:0002252,1.98e-07,1;CL:0002336,2.84e-07,1;CL:0002261,2.84e-07,1;CL:0002170,2.84e-07,1;CL:0002321,3.24e-07,250;CL:0000244,4.58e-07,4;CL:0000731,4.58e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000357;1.16e-09;6!CL:0000114;1.16e-09;6!CL:0000223;5.12e-09;58!CL:0000377;2.11e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!4.30e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.10e-07;1!DOID:3149;2.10e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.10e-07,1;DOID:3149,2.10e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!6.37e-17!21;UBERON:0001004!2.95e-16!72;UBERON:0000161!1.05e-14!35;UBERON:0000365!2.09e-14!5;UBERON:0000165!2.36e-14!28;UBERON:0000930!2.36e-14!28;UBERON:0004119!1.67e-13!169;UBERON:0000925!1.67e-13!169;UBERON:0006595!1.67e-13!169;UBERON:0005910!6.03e-12!6;UBERON:0001444!1.84e-11!48;UBERON:0003102!2.44e-10!95;UBERON:0004815!1.35e-09!3;UBERON:0002031!1.35e-09!3;UBERON:0003729!2.06e-09!5;UBERON:0001949!2.78e-09!3;UBERON:0007196!4.20e-09!14;UBERON:0001558!4.20e-09!14;UBERON:0000065!2.28e-08!53;UBERON:0000344!9.34e-08!12;UBERON:0001911!1.27e-07!4;UBERON:0005333!1.27e-07!4;UBERON:0008425!1.27e-07!4;UBERON:0005311!1.27e-07!4;UBERON:0002185!2.78e-07!4;UBERON:0003343!8.63e-07!4;UBERON:0004785!8.63e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;9.65e-14;4!UBERON:0000165;5.29e-09;28!UBERON:0004815;2.11e-08;3!UBERON:0002031;2.11e-08;3!UBERON:0001723;2.96e-08;3!UBERON:0001033;2.96e-08;3!UBERON:0000964;4.71e-07;4!UBERON:0010409;4.71e-07;4!UBERON:0001987;7.97e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.03e-13,4;UBERON:0005333,1.03e-13,4;UBERON:0008425,1.03e-13,4;UBERON:0005311,1.03e-13,4;UBERON:0003102,3.51e-13,99;UBERON:0000033,2.81e-10,56;UBERON:0000153,4.34e-09,62;UBERON:0007811,4.34e-09,62;UBERON:0000161,8.53e-09,36;UBERON:0004119,9.13e-09,160;UBERON:0000925,9.13e-09,160;UBERON:0006595,9.13e-09,160;UBERON:0000165,1.21e-08,29;UBERON:0000930,1.21e-08,29;UBERON:0000166,1.34e-08,22;UBERON:0005157,1.59e-08,47;UBERON:0004815,1.81e-08,3;UBERON:0002031,1.81e-08,3;UBERON:0001723,3.57e-08,3;UBERON:0001033,3.57e-08,3;UBERON:0010056,3.57e-08,3;UBERON:0001444,5.66e-08,49;UBERON:0000076,4.37e-07,8;UBERON:0001004,4.58e-07,74;UBERON:0000964,4.85e-07,4;UBERON:0010409,4.85e-07,4;UBERON:0004348,4.85e-07,4;UBERON:0005427,4.85e-07,4;UBERON:0001987,6.51e-07,4;UBERON:0004340,6.51e-07,4;UBERON:0005153,9.75e-07,37 | |||
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|short_description=p4@CU687195 | |||
}} |
Revision as of 23:10, 10 September 2013
Short description: | p4@CU687195 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CU687195_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | 141bp_to_CU687195_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.03e-13 | 4 |
mammary bud | 1.03e-13 | 4 |
mammary ridge | 1.03e-13 | 4 |
mammary placode | 1.03e-13 | 4 |
surface structure | 3.51e-13 | 99 |
head | 2.81e-10 | 56 |
anterior region of body | 4.34e-09 | 62 |
craniocervical region | 4.34e-09 | 62 |
orifice | 8.53e-09 | 36 |
endoderm-derived structure | 9.13e-09 | 160 |
endoderm | 9.13e-09 | 160 |
presumptive endoderm | 9.13e-09 | 160 |
mouth | 1.21e-08 | 29 |
stomodeum | 1.21e-08 | 29 |
oral opening | 1.34e-08 | 22 |
epithelial fold | 1.59e-08 | 47 |
lower respiratory tract epithelium | 1.81e-08 | 3 |
epithelium of bronchus | 1.81e-08 | 3 |
tongue | 3.57e-08 | 3 |
gustatory system | 3.57e-08 | 3 |
future tongue | 3.57e-08 | 3 |
subdivision of head | 5.66e-08 | 49 |
external ectoderm | 4.37e-07 | 8 |
respiratory system | 4.58e-07 | 74 |
cornea | 4.85e-07 | 4 |
eye surface | 4.85e-07 | 4 |
optic eminence | 4.85e-07 | 4 |
corneal primordium | 4.85e-07 | 4 |
placenta | 6.51e-07 | 4 |
allantois | 6.51e-07 | 4 |
epithelial bud | 9.75e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.10e-07 | 1 |
keratoacanthoma | 2.10e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.