FFCP PHASE1:Mm9::chr9:42209647..42209662,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=69|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:42209647..42209662,-|id=chr9:42209647..42209662,-|ontology_enrichment_celltype=CL:0000107!1.07e-30!9;CL:0000540!6.13e-12!33;CL:0000047!6.13e-12!33;CL:0000031!6.13e-12!33;CL:0000404!6.13e-12!33;CL:0000221!1.63e-10!44;CL:0000133!1.63e-10!44;CL:0000197!2.45e-10!2;CL:0002491!2.45e-10!2;CL:0000098!2.45e-10!2;CL:0000393!7.43e-10!39;CL:0000211!7.43e-10!39;CL:0002319!8.67e-09!43;CL:0000055!2.48e-07!50|ontology_enrichment_celltype_v019_2=CL:0000107,5.21e-52,9;CL:0000197,4.07e-21,2;CL:0002491,4.07e-21,2;CL:0000098,4.07e-21,2;CL:0000540,1.40e-18,33;CL:0000047,1.40e-18,33;CL:0000031,1.40e-18,33;CL:0000404,1.40e-18,33;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0000393,1.07e-15,39;CL:0000211,1.07e-15,39;CL:0002319,3.21e-14,43;CL:0000710,1.83e-11,1;CL:0002077,1.83e-11,1;CL:0005014,1.83e-11,1;CL:0002315,1.83e-11,1;CL:0002490,1.83e-11,1;CL:0002374,2.31e-11,1;CL:0000202,2.31e-11,1;CL:0000199,2.31e-11,1;CL:0000855,2.31e-11,1;CL:0000589,2.31e-11,1;CL:0002321,4.95e-11,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!1.07e-30!9;UBERON:0000010!6.19e-25!11;UBERON:0000013!3.29e-14!3;UBERON:0000011!4.44e-14!3;UBERON:0003465!2.45e-10!2;UBERON:0008193!2.45e-10!2;UBERON:0000032!2.45e-10!2;UBERON:0005744!2.45e-10!2;UBERON:0008001!2.45e-10!2;UBERON:0007497!2.45e-10!2;UBERON:0009955!2.45e-10!2;UBERON:0003067!2.45e-10!2;UBERON:0002546!2.45e-10!2;UBERON:0007914!2.45e-10!2;UBERON:0003457!2.45e-10!2;UBERON:0004766!2.45e-10!2;UBERON:0005253!2.45e-10!2;UBERON:0002227!2.45e-10!2;UBERON:0001846!2.45e-10!2;UBERON:0003128!2.45e-10!2;UBERON:0002241!2.45e-10!2;UBERON:0002105!2.45e-10!2;UBERON:0001678!2.45e-10!2;UBERON:0003129!2.45e-10!2;UBERON:0001694!2.45e-10!2;UBERON:0004681!2.45e-10!2;UBERON:0001839!2.45e-10!2;UBERON:0001690!2.45e-10!2;UBERON:0001844!2.45e-10!2;UBERON:0001849!2.45e-10!2;UBERON:0002499!2.45e-10!2;UBERON:0005944!2.45e-10!2;UBERON:0001855!2.45e-10!2;UBERON:0001703!2.45e-10!2;UBERON:0003069!2.45e-10!2;UBERON:0003051!2.45e-10!2;UBERON:0004288!2.45e-10!2;UBERON:0004637!2.45e-10!2;UBERON:0004761!2.45e-10!2;UBERON:0010113!2.45e-10!2;UBERON:0003089!2.45e-10!2;UBERON:0009123!2.45e-10!2;UBERON:0009617!2.45e-10!2;UBERON:0005641!2.45e-10!2;UBERON:0000058!3.50e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.21e-52,9;UBERON:0000010,1.39e-42,11;UBERON:0000013,8.94e-30,3;UBERON:0000011,1.75e-29,3;UBERON:0004766,4.07e-21,2;UBERON:0008193,4.07e-21,2;UBERON:0005913,4.07e-21,2;UBERON:0011158,4.07e-21,2;UBERON:0005744,4.07e-21,2;UBERON:0003457,4.07e-21,2;UBERON:0008001,4.07e-21,2;UBERON:0007497,4.07e-21,2;UBERON:0009955,4.07e-21,2;UBERON:0003067,4.07e-21,2;UBERON:0002546,4.07e-21,2;UBERON:0007914,4.07e-21,2;UBERON:0005253,4.07e-21,2;UBERON:0002227,4.07e-21,2;UBERON:0001846,4.07e-21,2;UBERON:0004339,4.07e-21,2;UBERON:0002105,4.07e-21,2;UBERON:0001678,4.07e-21,2;UBERON:0003128,4.07e-21,2;UBERON:0001694,4.07e-21,2;UBERON:0004681,4.07e-21,2;UBERON:0001839,4.07e-21,2;UBERON:0001690,4.07e-21,2;UBERON:0001844,4.07e-21,2;UBERON:0001849,4.07e-21,2;UBERON:0002499,4.07e-21,2;UBERON:0001855,4.07e-21,2;UBERON:0011137,4.07e-21,2;UBERON:0001703,4.07e-21,2;UBERON:0010323,4.07e-21,2;UBERON:0003129,4.07e-21,2;UBERON:0003069,4.07e-21,2;UBERON:0003051,4.07e-21,2;UBERON:0004637,4.07e-21,2;UBERON:0004761,4.07e-21,2;UBERON:0010113,4.07e-21,2;UBERON:0009123,4.07e-21,2;UBERON:0010351,4.07e-21,2;UBERON:0009617,4.07e-21,2;UBERON:0005641,4.07e-21,2;UBERON:0010349,4.07e-21,2;UBERON:0001017,2.91e-08,73;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0001016,4.95e-08,75;UBERON:0000075,1.12e-07,6;UBERON:0005856,1.12e-07,6;UBERON:0005866,1.12e-07,6;UBERON:0005863,1.12e-07,6|phase1_expression=5.44506080156299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.0698943285378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,1.07711698866399,2.62865677747807,4.90157082981267,3.11384183867716,4.04810701674894,4.09158201075837,3.95287777946523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr9:42209647..42209662,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=69 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:42209647..42209662,- | |||
|id=chr9:42209647..42209662,- | |||
|ontology_enrichment_celltype=CL:0000107!1.07e-30!9;CL:0000540!6.13e-12!33;CL:0000047!6.13e-12!33;CL:0000031!6.13e-12!33;CL:0000404!6.13e-12!33;CL:0000221!1.63e-10!44;CL:0000133!1.63e-10!44;CL:0000197!2.45e-10!2;CL:0002491!2.45e-10!2;CL:0000098!2.45e-10!2;CL:0000393!7.43e-10!39;CL:0000211!7.43e-10!39;CL:0002319!8.67e-09!43;CL:0000055!2.48e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.21e-52,9;CL:0000197,4.07e-21,2;CL:0002491,4.07e-21,2;CL:0000098,4.07e-21,2;CL:0000540,1.40e-18,33;CL:0000047,1.40e-18,33;CL:0000031,1.40e-18,33;CL:0000404,1.40e-18,33;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0000393,1.07e-15,39;CL:0000211,1.07e-15,39;CL:0002319,3.21e-14,43;CL:0000710,1.83e-11,1;CL:0002077,1.83e-11,1;CL:0005014,1.83e-11,1;CL:0002315,1.83e-11,1;CL:0002490,1.83e-11,1;CL:0002374,2.31e-11,1;CL:0000202,2.31e-11,1;CL:0000199,2.31e-11,1;CL:0000855,2.31e-11,1;CL:0000589,2.31e-11,1;CL:0002321,4.95e-11,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.07e-30!9;UBERON:0000010!6.19e-25!11;UBERON:0000013!3.29e-14!3;UBERON:0000011!4.44e-14!3;UBERON:0003465!2.45e-10!2;UBERON:0008193!2.45e-10!2;UBERON:0000032!2.45e-10!2;UBERON:0005744!2.45e-10!2;UBERON:0008001!2.45e-10!2;UBERON:0007497!2.45e-10!2;UBERON:0009955!2.45e-10!2;UBERON:0003067!2.45e-10!2;UBERON:0002546!2.45e-10!2;UBERON:0007914!2.45e-10!2;UBERON:0003457!2.45e-10!2;UBERON:0004766!2.45e-10!2;UBERON:0005253!2.45e-10!2;UBERON:0002227!2.45e-10!2;UBERON:0001846!2.45e-10!2;UBERON:0003128!2.45e-10!2;UBERON:0002241!2.45e-10!2;UBERON:0002105!2.45e-10!2;UBERON:0001678!2.45e-10!2;UBERON:0003129!2.45e-10!2;UBERON:0001694!2.45e-10!2;UBERON:0004681!2.45e-10!2;UBERON:0001839!2.45e-10!2;UBERON:0001690!2.45e-10!2;UBERON:0001844!2.45e-10!2;UBERON:0001849!2.45e-10!2;UBERON:0002499!2.45e-10!2;UBERON:0005944!2.45e-10!2;UBERON:0001855!2.45e-10!2;UBERON:0001703!2.45e-10!2;UBERON:0003069!2.45e-10!2;UBERON:0003051!2.45e-10!2;UBERON:0004288!2.45e-10!2;UBERON:0004637!2.45e-10!2;UBERON:0004761!2.45e-10!2;UBERON:0010113!2.45e-10!2;UBERON:0003089!2.45e-10!2;UBERON:0009123!2.45e-10!2;UBERON:0009617!2.45e-10!2;UBERON:0005641!2.45e-10!2;UBERON:0000058!3.50e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.21e-52,9;UBERON:0000010,1.39e-42,11;UBERON:0000013,8.94e-30,3;UBERON:0000011,1.75e-29,3;UBERON:0004766,4.07e-21,2;UBERON:0008193,4.07e-21,2;UBERON:0005913,4.07e-21,2;UBERON:0011158,4.07e-21,2;UBERON:0005744,4.07e-21,2;UBERON:0003457,4.07e-21,2;UBERON:0008001,4.07e-21,2;UBERON:0007497,4.07e-21,2;UBERON:0009955,4.07e-21,2;UBERON:0003067,4.07e-21,2;UBERON:0002546,4.07e-21,2;UBERON:0007914,4.07e-21,2;UBERON:0005253,4.07e-21,2;UBERON:0002227,4.07e-21,2;UBERON:0001846,4.07e-21,2;UBERON:0004339,4.07e-21,2;UBERON:0002105,4.07e-21,2;UBERON:0001678,4.07e-21,2;UBERON:0003128,4.07e-21,2;UBERON:0001694,4.07e-21,2;UBERON:0004681,4.07e-21,2;UBERON:0001839,4.07e-21,2;UBERON:0001690,4.07e-21,2;UBERON:0001844,4.07e-21,2;UBERON:0001849,4.07e-21,2;UBERON:0002499,4.07e-21,2;UBERON:0001855,4.07e-21,2;UBERON:0011137,4.07e-21,2;UBERON:0001703,4.07e-21,2;UBERON:0010323,4.07e-21,2;UBERON:0003129,4.07e-21,2;UBERON:0003069,4.07e-21,2;UBERON:0003051,4.07e-21,2;UBERON:0004637,4.07e-21,2;UBERON:0004761,4.07e-21,2;UBERON:0010113,4.07e-21,2;UBERON:0009123,4.07e-21,2;UBERON:0010351,4.07e-21,2;UBERON:0009617,4.07e-21,2;UBERON:0005641,4.07e-21,2;UBERON:0010349,4.07e-21,2;UBERON:0001017,2.91e-08,73;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0001016,4.95e-08,75;UBERON:0000075,1.12e-07,6;UBERON:0005856,1.12e-07,6;UBERON:0005866,1.12e-07,6;UBERON:0005863,1.12e-07,6 | |||
|phase1_expression=5.44506080156299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.0698943285378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,1.07711698866399,2.62865677747807,4.90157082981267,3.11384183867716,4.04810701674894,4.09158201075837,3.95287777946523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr9:42209647..42209662,- | |||
}} |
Revision as of 17:51, 14 September 2013
Short description: | p@chr9:42209647..42209662, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:42209647..42209662, - |
Coexpression cluster: | MCL_coexpression_mm9:69 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.21e-52 | 9 |
receptor cell | 4.07e-21 | 2 |
auditory epithelial cell | 4.07e-21 | 2 |
sensory epithelial cell | 4.07e-21 | 2 |
neuron | 1.40e-18 | 33 |
neuronal stem cell | 1.40e-18 | 33 |
neuroblast | 1.40e-18 | 33 |
electrically signaling cell | 1.40e-18 | 33 |
ectodermal cell | 1.08e-17 | 44 |
neurectodermal cell | 1.08e-17 | 44 |
electrically responsive cell | 1.07e-15 | 39 |
electrically active cell | 1.07e-15 | 39 |
neural cell | 3.21e-14 | 43 |
neurecto-epithelial cell | 1.83e-11 | 1 |
ecto-epithelial cell | 1.83e-11 | 1 |
auditory epithelial support cell | 1.83e-11 | 1 |
supporting cell of cochlea | 1.83e-11 | 1 |
organ of Corti supporting cell | 1.83e-11 | 1 |
ear hair cell | 2.31e-11 | 1 |
auditory hair cell | 2.31e-11 | 1 |
mechanoreceptor cell | 2.31e-11 | 1 |
sensory hair cell | 2.31e-11 | 1 |
cochlear inner hair cell | 2.31e-11 | 1 |
embryonic cell | 4.95e-11 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.