FFCP PHASE1:Hg19::chr19:18492973..18492983,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr19:18492973..18492983,+ | |||
|id=chr19:18492973..18492983,+ | |||
|ontology_enrichment_celltype=CL:1000449!3.14e-12!16;CL:1000507!7.69e-11!12;CL:1000494!7.69e-11!12;CL:1000497!1.32e-10!18;CL:0002518!1.32e-10!18;CL:0002681!4.73e-10!13;CL:0002584!4.73e-10!13;CL:0000066!1.16e-08!254;CL:0002504!7.64e-08!3;CL:1000279!7.64e-08!3;CL:1000280!7.64e-08!3;CL:0002586!1.42e-07!3;CL:0000669!1.95e-07!5;CL:0000075!5.22e-07!27;CL:0000064!8.03e-07!3;CL:0005012!8.03e-07!3;CL:0000067!8.03e-07!3;CL:0002304!8.03e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002563;1.66e-14;4!CL:0000669;5.65e-14;4!CL:0000650;7.04e-13;2!CL:1000500;7.04e-13;2!CL:1000618;7.04e-13;2!CL:1001318;7.04e-13;2!CL:0002173;7.04e-13;2!CL:0002681;1.83e-12;12!CL:0002584;1.83e-12;12!CL:1000449;6.25e-10;15!CL:1000507;1.04e-09;10!CL:1000494;1.04e-09;10!CL:0000322;2.14e-09;3!CL:0002504;2.23e-09;3!CL:1000279;2.23e-09;3!CL:1000280;2.23e-09;3!CL:0002586;2.64e-09;3!CL:1000497;9.79e-09;17!CL:0002518;9.79e-09;17!CL:0000182;1.18e-08;12!CL:1000746;1.92e-08;7!CL:1000612;1.92e-08;7!CL:0000149;3.51e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.74e-14,4;CL:0000669,8.12e-14,4;CL:0000650,7.96e-13,2;CL:1000500,7.96e-13,2;CL:1000618,7.96e-13,2;CL:1001318,7.96e-13,2;CL:0002173,7.96e-13,2;CL:0002681,1.88e-12,12;CL:0002584,1.88e-12,12;CL:1000449,6.39e-10,15;CL:1000507,1.06e-09,10;CL:1000494,1.06e-09,10;CL:0002504,2.06e-09,3;CL:1000279,2.06e-09,3;CL:1000280,2.06e-09,3;CL:0000322,2.15e-09,3;CL:0002586,2.64e-09,3;CL:0000182,9.89e-09,12;CL:1000497,9.98e-09,17;CL:0002518,9.98e-09,17;CL:1000746,2.02e-08,7;CL:1000612,2.02e-08,7;CL:0000223,2.60e-07,58;CL:0000149,3.52e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0001041;8.34e-19;30!UBERON:0004161;4.14e-14;11!UBERON:0009497;6.63e-12;13!UBERON:0003104;2.20e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;9.09e-08;1!DOID:1357;9.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,9.10e-08,1;DOID:1357,9.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002113!9.12e-15!27;UBERON:0003918!9.12e-15!27;UBERON:0005095!9.12e-15!27;UBERON:0007687!9.12e-15!27;UBERON:0007625!3.61e-14!11;UBERON:0005172!8.37e-14!55;UBERON:0005173!8.37e-14!55;UBERON:0000489!1.75e-13!32;UBERON:0005177!2.99e-13!107;UBERON:0002417!5.00e-13!61;UBERON:0000916!5.00e-13!61;UBERON:0006554!1.21e-12!44;UBERON:0001008!3.01e-12!45;UBERON:0004211!3.14e-12!16;UBERON:0001285!3.14e-12!16;UBERON:0007684!3.14e-12!16;UBERON:0003220!3.14e-12!16;UBERON:0004208!3.14e-12!16;UBERON:0009569!4.72e-12!113;UBERON:0000466!1.51e-11!126;UBERON:0006555!2.28e-11!17;UBERON:0005103!2.28e-11!17;UBERON:0000083!2.28e-11!17;UBERON:0009201!2.28e-11!17;UBERON:0004819!2.28e-11!17;UBERON:0006553!2.28e-11!17;UBERON:0003074!2.28e-11!17;UBERON:0003060!2.28e-11!17;UBERON:0009773!7.69e-11!12;UBERON:0001231!7.69e-11!12;UBERON:0004810!7.69e-11!12;UBERON:0000080!1.32e-10!18;UBERON:0002120!1.32e-10!18;UBERON:0004875!1.32e-10!18;UBERON:0005721!1.32e-10!18;UBERON:0005754!1.32e-10!18;UBERON:0007297!1.32e-10!18;UBERON:0001225!4.73e-10!13;UBERON:0008987!4.73e-10!13;UBERON:0004876!2.60e-09!20;UBERON:0000019!4.51e-09!19;UBERON:0000047!4.51e-09!19;UBERON:0004088!4.51e-09!19;UBERON:0003072!4.51e-09!19;UBERON:0003071!4.51e-09!19;UBERON:0004128!4.51e-09!19;UBERON:0003887!9.30e-09!21;UBERON:0000481!1.20e-08!347;UBERON:0000464!1.39e-08!104;UBERON:0000970!1.64e-08!20;UBERON:0000058!3.35e-08!26;UBERON:0003064!4.09e-08!37;UBERON:0005911!4.57e-08!82;UBERON:0002104!5.27e-08!21;UBERON:0001456!5.27e-08!21;UBERON:0000119!6.63e-08!312;UBERON:0001851!7.37e-08!16;UBERON:0001781!1.42e-07!3;UBERON:0001782!1.42e-07!3;UBERON:0005424!1.42e-07!3;UBERON:0002100!1.51e-07!216;UBERON:0003350!1.57e-07!5;UBERON:0000353!2.65e-07!17;UBERON:0000966!3.01e-07!5;UBERON:0005388!3.01e-07!5;UBERON:0001802!3.01e-07!5;UBERON:0000020!3.97e-07!23;UBERON:0003104!5.59e-07!238;UBERON:0009142!5.59e-07!238;UBERON:0001778!8.03e-07!3;UBERON:0001775!8.03e-07!3;UBERON:0001032!9.58e-07!24;UBERON:0004456!9.58e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.66e-14;4!UBERON:0001262;1.66e-14;4!UBERON:0004786;1.66e-14;4!UBERON:0004808;1.66e-14;4!UBERON:0001277;1.66e-14;4!UBERON:0003567;7.04e-13;2!UBERON:0003838;7.04e-13;2!UBERON:0003586;7.04e-13;2!UBERON:0005169;7.04e-13;2!UBERON:0002321;7.04e-13;2!UBERON:0005215;7.04e-13;2!UBERON:0002303;7.04e-13;2!UBERON:0002319;7.04e-13;2!UBERON:0001225;1.83e-12;12!UBERON:0008987;1.83e-12;12!UBERON:0005172;8.23e-12;52!UBERON:0005173;8.23e-12;52!UBERON:0002113;1.87e-11;24!UBERON:0011143;1.87e-11;24!UBERON:0002107;2.89e-11;19!UBERON:0006925;2.89e-11;19!UBERON:0001851;6.25e-10;15!UBERON:0006555;6.25e-10;15!UBERON:0000353;6.25e-10;15!UBERON:0004819;6.25e-10;15!UBERON:0001285;6.25e-10;15!UBERON:0007684;6.25e-10;15!UBERON:0002417;1.01e-09;58!UBERON:0000916;1.01e-09;58!UBERON:0004211;1.04e-09;10!UBERON:0009773;1.04e-09;10!UBERON:0001231;1.04e-09;10!UBERON:0004810;1.04e-09;10!UBERON:0002048;1.53e-09;22!UBERON:0000117;1.53e-09;22!UBERON:0000171;1.53e-09;22!UBERON:0000170;1.53e-09;22!UBERON:0004821;2.14e-09;3!UBERON:0007499;2.14e-09;3!UBERON:0003215;2.14e-09;3!UBERON:0010368;2.14e-09;3!UBERON:0009911;2.14e-09;3!UBERON:0002299;2.14e-09;3!UBERON:0006524;2.14e-09;3!UBERON:0008874;2.14e-09;3!UBERON:0002169;2.14e-09;3!UBERON:0004894;2.14e-09;3!UBERON:0000489;2.47e-09;29!UBERON:0001781;2.64e-09;3!UBERON:0001782;2.64e-09;3!UBERON:0006554;5.39e-09;30!UBERON:0001008;5.39e-09;30!UBERON:0000485;1.69e-08;7!UBERON:0003929;1.69e-08;7!UBERON:0000160;1.82e-08;17!UBERON:0000074;1.92e-08;7!UBERON:0001229;1.92e-08;7!UBERON:0002423;2.01e-08;25!UBERON:0009569;3.60e-08;110!UBERON:0001764;9.09e-08;1!UBERON:0001825;9.09e-08;1!UBERON:0003350;1.72e-07;8!UBERON:0002171;2.82e-07;1!UBERON:0006518;2.82e-07;1!UBERON:0008949;2.82e-07;1!UBERON:0000101;2.82e-07;1!UBERON:0002167;2.82e-07;1!UBERON:0009856;3.01e-07;4!UBERON:0003891;7.26e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.84e-18,101;UBERON:0005172,1.83e-16,54;UBERON:0005173,1.83e-16,54;UBERON:0009569,1.08e-15,112;UBERON:0007499,8.88e-15,25;UBERON:0002417,1.46e-14,60;UBERON:0000916,1.46e-14,60;UBERON:0001242,1.74e-14,4;UBERON:0001262,1.74e-14,4;UBERON:0004786,1.74e-14,4;UBERON:0004808,1.74e-14,4;UBERON:0001277,1.74e-14,4;UBERON:0009856,3.65e-14,26;UBERON:0005911,8.51e-14,82;UBERON:0003567,7.96e-13,2;UBERON:0003838,7.96e-13,2;UBERON:0003586,7.96e-13,2;UBERON:0005169,7.96e-13,2;UBERON:0002321,7.96e-13,2;UBERON:0005215,7.96e-13,2;UBERON:0002303,7.96e-13,2;UBERON:0002319,7.96e-13,2;UBERON:0001225,1.88e-12,12;UBERON:0008987,1.88e-12,12;UBERON:0004921,1.94e-11,118;UBERON:0002107,3.01e-11,19;UBERON:0006925,3.01e-11,19;UBERON:0008836,3.01e-11,19;UBERON:0002113,1.63e-10,26;UBERON:0003918,1.63e-10,26;UBERON:0011143,1.63e-10,26;UBERON:0005095,1.63e-10,26;UBERON:0007687,1.63e-10,26;UBERON:0001851,6.39e-10,15;UBERON:0004211,6.39e-10,15;UBERON:0009773,6.39e-10,15;UBERON:0000353,6.39e-10,15;UBERON:0001231,6.39e-10,15;UBERON:0001285,6.39e-10,15;UBERON:0007684,6.39e-10,15;UBERON:0004208,6.39e-10,15;UBERON:0004810,1.06e-09,10;UBERON:0008835,1.23e-09,22;UBERON:0003894,1.23e-09,22;UBERON:0002048,1.46e-09,22;UBERON:0000117,1.46e-09,22;UBERON:0000171,1.46e-09,22;UBERON:0000170,1.46e-09,22;UBERON:0005597,1.46e-09,22;UBERON:0000118,1.46e-09,22;UBERON:0004821,2.15e-09,3;UBERON:0003215,2.15e-09,3;UBERON:0010368,2.15e-09,3;UBERON:0009911,2.15e-09,3;UBERON:0002299,2.15e-09,3;UBERON:0006524,2.15e-09,3;UBERON:0008874,2.15e-09,3;UBERON:0002169,2.15e-09,3;UBERON:0004894,2.15e-09,3;UBERON:0001782,2.64e-09,3;UBERON:0005424,2.64e-09,3;UBERON:0006555,2.75e-09,16;UBERON:0004819,2.75e-09,16;UBERON:0002100,3.18e-09,199;UBERON:0009854,3.41e-09,23;UBERON:0000489,1.11e-08,31;UBERON:0001007,1.11e-08,145;UBERON:0001555,1.11e-08,145;UBERON:0007026,1.11e-08,145;UBERON:0000160,1.80e-08,17;UBERON:0010532,2.02e-08,7;UBERON:0000074,2.02e-08,7;UBERON:0001229,2.02e-08,7;UBERON:0001230,2.02e-08,7;UBERON:0003220,2.02e-08,7;UBERON:0005749,2.02e-08,7;UBERON:0004199,2.02e-08,7;UBERON:0004209,2.02e-08,7;UBERON:0004198,2.02e-08,7;UBERON:0009497,2.06e-08,25;UBERON:0000015,2.06e-08,25;UBERON:0002423,2.06e-08,25;UBERON:0006235,2.06e-08,25;UBERON:0004161,2.06e-08,25;UBERON:0001041,6.80e-08,87;UBERON:0003929,8.37e-08,54;UBERON:0001764,9.10e-08,1;UBERON:0001825,9.10e-08,1;UBERON:0004119,1.49e-07,160;UBERON:0000925,1.49e-07,160;UBERON:0006595,1.49e-07,160;UBERON:0001048,1.58e-07,160;UBERON:0000483,1.67e-07,306;UBERON:0003350,1.76e-07,8;UBERON:0005103,2.02e-07,8;UBERON:0000083,2.02e-07,8;UBERON:0009201,2.02e-07,8;UBERON:0006553,2.02e-07,8;UBERON:0003074,2.02e-07,8;UBERON:0003060,2.02e-07,8;UBERON:0000119,2.21e-07,309;UBERON:0001781,3.52e-07,4;UBERON:0002171,3.62e-07,1;UBERON:0006518,3.62e-07,1;UBERON:0008949,3.62e-07,1;UBERON:0000101,3.62e-07,1;UBERON:0002167,3.62e-07,1;UBERON:0003891,7.72e-07,4;UBERON:0001155,9.76e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,12.532430761577,37.6812630705111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.527008714158756,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.232387885739037,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09080345523293,0,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,0,0.823240336780769,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0.902399225814824,1.15523005656622,0.784349769176855,0,0.527758144464379,0,0,0.431831832204279,0,1.35473218771926,1.50506932156456,0,0.831076008928724,1.79099803777743,0,0,0.256450125116389,2.62411716559765,2.27764876265012,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,5.03642881233281,0.823611089208164,2.82749765629647,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70539524378567,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,1.68798451622422,0,1.55488378577335,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.216082491329,33.9553336530406,41.3857759264695,1.96854963029498,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,1.73100140845494,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,1.60181118851542,17.9212907813619,1.24271716604159,0,0,0,0,0,0,0,0,13.8207604700206,0,0,0,0,0,0.248385611765534,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.593682160298,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66059127923341,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,1.01084389488329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:18492973..18492983,+ | |||
}} |
Revision as of 22:11, 20 January 2014
Short description: | p@chr19:18492973..18492983, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18492973..18492983, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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intestinal epithelial cell | 1.74e-14 | 4 |
pericyte cell | 8.12e-14 | 4 |
mesangial cell | 7.96e-13 | 2 |
kidney interstitial cell | 7.96e-13 | 2 |
juxtaglomerular complex cell | 7.96e-13 | 2 |
renal interstitial pericyte | 7.96e-13 | 2 |
extraglomerular mesangial cell | 7.96e-13 | 2 |
kidney cortical cell | 1.88e-12 | 12 |
renal cortical epithelial cell | 1.88e-12 | 12 |
epithelial cell of nephron | 6.39e-10 | 15 |
kidney tubule cell | 1.06e-09 | 10 |
nephron tubule epithelial cell | 1.06e-09 | 10 |
enteric smooth muscle cell | 2.06e-09 | 3 |
smooth muscle cell of large intestine | 2.06e-09 | 3 |
smooth muscle cell of colon | 2.06e-09 | 3 |
pneumocyte | 2.15e-09 | 3 |
retinal pigment epithelial cell | 2.64e-09 | 3 |
hepatocyte | 9.89e-09 | 12 |
kidney cell | 9.98e-09 | 17 |
kidney epithelial cell | 9.98e-09 | 17 |
glomerular cell | 2.02e-08 | 7 |
kidney corpuscule cell | 2.02e-08 | 7 |
endodermal cell | 2.60e-07 | 58 |
visual pigment cell | 3.52e-07 | 4 |
Ontology term | p-value | n |
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