FFCP PHASE1:Hg19::chr12:52908762..52908781,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_CU687195_5end | |association_with_transcript=35bp_to_CU687195_5end | ||
|cluster_id=chr12:52908762..52908781,+ | |||
|coexpression_cluster_id=C207 | |coexpression_cluster_id=C207 | ||
|description=CAGE_peak_10_at_CU687195_5end | |description=CAGE_peak_10_at_CU687195_5end | ||
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|ontology_enrichment_celltype=CL:0002076!5.51e-25!43;CL:0002159!1.41e-24!13;CL:0002368!6.77e-19!13;CL:0000223!8.55e-17!59;CL:0000066!3.21e-15!254;CL:0002202!4.73e-13!9;CL:0002632!4.73e-13!9;CL:0002328!3.60e-11!3;CL:0000622!4.25e-11!5;CL:0000362!8.94e-11!8;CL:0002251!1.20e-10!21;CL:0000068!1.64e-10!3;CL:0000069!1.64e-10!3;CL:0000307!1.64e-10!3;CL:0000377!1.64e-10!3;CL:0002166!2.12e-10!3;CL:0002077!4.12e-10!33;CL:0000240!1.73e-09!6;CL:0000311!1.73e-09!6;CL:0000079!1.73e-09!6;CL:0000237!1.73e-09!6;CL:0000036!1.73e-09!6;CL:0000357!1.73e-09!6;CL:0000114!1.73e-09!6;CL:0000154!3.02e-09!6;CL:0000076!3.13e-08!62;CL:0002327!3.36e-08!4;CL:0000575!3.47e-08!2;CL:0000244!3.80e-08!4;CL:0000731!3.80e-08!4;CL:0000317!5.05e-08!2;CL:1000448!5.05e-08!2;CL:0002308!5.05e-08!2;CL:0002140!5.05e-08!2;CL:0000312!7.78e-07!5 | |ontology_enrichment_celltype=CL:0002076!5.51e-25!43;CL:0002159!1.41e-24!13;CL:0002368!6.77e-19!13;CL:0000223!8.55e-17!59;CL:0000066!3.21e-15!254;CL:0002202!4.73e-13!9;CL:0002632!4.73e-13!9;CL:0002328!3.60e-11!3;CL:0000622!4.25e-11!5;CL:0000362!8.94e-11!8;CL:0002251!1.20e-10!21;CL:0000068!1.64e-10!3;CL:0000069!1.64e-10!3;CL:0000307!1.64e-10!3;CL:0000377!1.64e-10!3;CL:0002166!2.12e-10!3;CL:0002077!4.12e-10!33;CL:0000240!1.73e-09!6;CL:0000311!1.73e-09!6;CL:0000079!1.73e-09!6;CL:0000237!1.73e-09!6;CL:0000036!1.73e-09!6;CL:0000357!1.73e-09!6;CL:0000114!1.73e-09!6;CL:0000154!3.02e-09!6;CL:0000076!3.13e-08!62;CL:0002327!3.36e-08!4;CL:0000575!3.47e-08!2;CL:0000244!3.80e-08!4;CL:0000731!3.80e-08!4;CL:0000317!5.05e-08!2;CL:1000448!5.05e-08!2;CL:0002308!5.05e-08!2;CL:0002140!5.05e-08!2;CL:0000312!7.78e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002159;5.03e-45;14!CL:0002328;1.03e-24;3!CL:0000362;3.21e-22;9!CL:0002202;3.83e-22;9!CL:0002632;3.83e-22;9!CL:0000240;1.68e-21;6!CL:0000311;1.68e-21;6!CL:0000079;1.68e-21;6!CL:0000237;1.68e-21;6!CL:0000575;1.43e-17;2!CL:0000317;3.82e-17;2!CL:1000448;3.82e-17;2!CL:0002308;3.82e-17;2!CL:0002140;3.82e-17;2!CL:0002077;4.80e-17;34!CL:0002368;2.65e-15;13!CL:0000312;4.65e-15;5!CL:0000307;1.25e-11;3!CL:0002166;2.08e-11;3!CL:0002231;2.08e-11;3!CL:0002076;3.23e-10;42!CL:0002336;3.53e-09;1!CL:0002261;3.53e-09;1!CL:0002252;3.53e-09;1!CL:0002170;3.53e-09;1!CL:0002327;4.98e-09;4!CL:0000622;2.18e-07;5 | |ontology_enrichment_celltype_v019=CL:0002159;5.03e-45;14!CL:0002328;1.03e-24;3!CL:0000362;3.21e-22;9!CL:0002202;3.83e-22;9!CL:0002632;3.83e-22;9!CL:0000240;1.68e-21;6!CL:0000311;1.68e-21;6!CL:0000079;1.68e-21;6!CL:0000237;1.68e-21;6!CL:0000575;1.43e-17;2!CL:0000317;3.82e-17;2!CL:1000448;3.82e-17;2!CL:0002308;3.82e-17;2!CL:0002140;3.82e-17;2!CL:0002077;4.80e-17;34!CL:0002368;2.65e-15;13!CL:0000312;4.65e-15;5!CL:0000307;1.25e-11;3!CL:0002166;2.08e-11;3!CL:0002231;2.08e-11;3!CL:0002076;3.23e-10;42!CL:0002336;3.53e-09;1!CL:0002261;3.53e-09;1!CL:0002252;3.53e-09;1!CL:0002170;3.53e-09;1!CL:0002327;4.98e-09;4!CL:0000622;2.18e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,4.33e-45,14;CL:0002328,1.03e-24,3;CL:0000362,3.15e-22,9;CL:0002202,3.93e-22,9;CL:0002632,3.93e-22,9;CL:0000240,1.52e-21,6;CL:0000311,1.52e-21,6;CL:0000079,1.52e-21,6;CL:0000237,1.52e-21,6;CL:0000036,1.52e-21,6;CL:0000357,1.52e-21,6;CL:0000114,1.52e-21,6;CL:0002077,7.93e-18,34;CL:0000575,1.62e-17,2;CL:0000317,3.98e-17,2;CL:1000448,3.98e-17,2;CL:0002308,3.98e-17,2;CL:0002140,3.98e-17,2;CL:0002368,2.69e-15,13;CL:0000312,4.43e-15,5;CL:0002076,5.82e-14,42;CL:0000066,5.03e-13,253;CL:0000068,1.29e-11,3;CL:0000069,1.29e-11,3;CL:0000307,1.29e-11,3;CL:0000377,1.29e-11,3;CL:0002166,1.68e-11,3;CL:0002231,2.44e-11,3;CL:0000223,9.51e-10,58;CL:0002252,2.35e-09,1;CL:0000221,3.02e-09,72;CL:0002336,3.25e-09,1;CL:0002261,3.25e-09,1;CL:0002170,3.25e-09,1;CL:0002327,5.09e-09,4;CL:0000076,5.65e-09,63;CL:0000622,2.21e-07,5;CL:0002321,4.95e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;1.68e-21;6!CL:0000114;1.68e-21;6!CL:0000377;1.25e-11;3!UBERON:0000358;1.62e-09;1!CL:0000223;4.82e-07;58 | |ontology_enrichment_development_v019=CL:0000357;1.68e-21;6!CL:0000114;1.68e-21;6!CL:0000377;1.25e-11;3!UBERON:0000358;1.62e-09;1!CL:0000223;4.82e-07;58 | ||
|ontology_enrichment_disease=DOID:1749!3.93e-07!14 | |ontology_enrichment_disease=DOID:1749!3.93e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.62e-09;1!DOID:3149;1.62e-09;1 | |ontology_enrichment_disease_v019=DOID:3151;1.62e-09;1!DOID:3149;1.62e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.56e-09,1;DOID:3149,1.56e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.88e-12!72;UBERON:0004815!3.60e-11!3;UBERON:0002031!3.60e-11!3;UBERON:0004119!4.08e-11!169;UBERON:0000925!4.08e-11!169;UBERON:0006595!4.08e-11!169;UBERON:0000166!2.10e-10!21;UBERON:0000165!2.88e-09!28;UBERON:0000930!2.88e-09!28;UBERON:0003102!7.93e-09!95;UBERON:0000161!1.24e-08!35;UBERON:0000065!1.71e-08!53;UBERON:0002185!1.82e-08!4;UBERON:0001911!3.36e-08!4;UBERON:0005333!3.36e-08!4;UBERON:0008425!3.36e-08!4;UBERON:0005311!3.36e-08!4;UBERON:0007196!4.05e-08!14;UBERON:0001558!4.05e-08!14;UBERON:0002419!5.05e-08!2;UBERON:0007771!5.05e-08!2;UBERON:0003297!5.05e-08!2;UBERON:0001821!5.05e-08!2;UBERON:0003487!5.05e-08!2;UBERON:0001820!5.05e-08!2;UBERON:0005089!5.05e-08!2;UBERON:0005088!5.05e-08!2;UBERON:0001708!6.75e-08!4;UBERON:0001704!6.75e-08!4;UBERON:0005631!8.84e-08!14;UBERON:0000158!8.84e-08!14;UBERON:0001042!2.54e-07!10;UBERON:0009145!2.54e-07!10;UBERON:0000974!4.30e-07!10;UBERON:0001444!5.08e-07!48 | |ontology_enrichment_uberon=UBERON:0001004!1.88e-12!72;UBERON:0004815!3.60e-11!3;UBERON:0002031!3.60e-11!3;UBERON:0004119!4.08e-11!169;UBERON:0000925!4.08e-11!169;UBERON:0006595!4.08e-11!169;UBERON:0000166!2.10e-10!21;UBERON:0000165!2.88e-09!28;UBERON:0000930!2.88e-09!28;UBERON:0003102!7.93e-09!95;UBERON:0000161!1.24e-08!35;UBERON:0000065!1.71e-08!53;UBERON:0002185!1.82e-08!4;UBERON:0001911!3.36e-08!4;UBERON:0005333!3.36e-08!4;UBERON:0008425!3.36e-08!4;UBERON:0005311!3.36e-08!4;UBERON:0007196!4.05e-08!14;UBERON:0001558!4.05e-08!14;UBERON:0002419!5.05e-08!2;UBERON:0007771!5.05e-08!2;UBERON:0003297!5.05e-08!2;UBERON:0001821!5.05e-08!2;UBERON:0003487!5.05e-08!2;UBERON:0001820!5.05e-08!2;UBERON:0005089!5.05e-08!2;UBERON:0005088!5.05e-08!2;UBERON:0001708!6.75e-08!4;UBERON:0001704!6.75e-08!4;UBERON:0005631!8.84e-08!14;UBERON:0000158!8.84e-08!14;UBERON:0001042!2.54e-07!10;UBERON:0009145!2.54e-07!10;UBERON:0000974!4.30e-07!10;UBERON:0001444!5.08e-07!48 | ||
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|short_description=p10@CU687195 | |short_description=p10@CU687195 | ||
}} | }} |
Latest revision as of 09:35, 24 July 2015
Short description: | p10@CU687195 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CU687195_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | 35bp_to_CU687195_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.03e-24 | 3 |
epithelium of bronchus | 1.03e-24 | 3 |
skin gland | 3.98e-17 | 2 |
epidermis gland | 3.98e-17 | 2 |
gland of integumental system | 3.98e-17 | 2 |
sebaceous gland | 3.98e-17 | 2 |
skin sebaceous gland | 3.98e-17 | 2 |
sweat gland | 3.98e-17 | 2 |
sweat gland placode | 3.98e-17 | 2 |
sebaceous gland placode | 3.98e-17 | 2 |
bronchus | 4.43e-15 | 5 |
skin epidermis | 2.69e-13 | 15 |
outer epithelium | 2.69e-13 | 15 |
enveloping layer of ectoderm | 2.69e-13 | 15 |
tracheobronchial tree | 3.07e-13 | 15 |
lower respiratory tract | 3.07e-13 | 15 |
epithelial fold | 1.73e-12 | 47 |
surface structure | 2.49e-11 | 99 |
epithelial bud | 8.68e-10 | 37 |
cornea | 3.26e-09 | 4 |
eye surface | 3.26e-09 | 4 |
optic eminence | 3.26e-09 | 4 |
corneal primordium | 3.26e-09 | 4 |
mammary gland | 5.09e-09 | 4 |
mammary bud | 5.09e-09 | 4 |
mammary ridge | 5.09e-09 | 4 |
mammary placode | 5.09e-09 | 4 |
ectodermal placode | 5.71e-09 | 31 |
jaw skeleton | 7.58e-09 | 4 |
splanchnocranium | 7.58e-09 | 4 |
simple columnar epithelium | 1.31e-08 | 9 |
thoracic cavity element | 5.09e-08 | 34 |
thoracic cavity | 5.09e-08 | 34 |
thoracic segment organ | 8.92e-08 | 35 |
primary subdivision of cranial skeletal system | 3.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.56e-09 | 1 |
keratoacanthoma | 1.56e-09 | 1 |