FFCP PHASE1:Hg19::chr12:52910911..52910946,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52910911..52910946,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52910911..52910946,+ | |description=CAGE_peak_at_chr12:52910911..52910946,+ | ||
|id=chr12:52910911..52910946,+ | |id=chr12:52910911..52910946,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.88e-32!43;CL:0000223!5.17e-24!59;CL:0002159!1.57e-23!13;CL:0000066!2.81e-23!254;CL:0002368!1.38e-22!13;CL:0002251!1.52e-15!21;CL:0002077!1.21e-13!33;CL:0002202!1.27e-12!9;CL:0002632!1.27e-12!9;CL:0000076!1.57e-11!62;CL:0002328!8.86e-11!3;CL:0000622!1.64e-10!5;CL:0002166!2.69e-10!3;CL:0000068!2.86e-10!3;CL:0000069!2.86e-10!3;CL:0000307!2.86e-10!3;CL:0000377!2.86e-10!3;CL:0000362!3.46e-10!8;CL:0002621!1.11e-09!3;CL:0000240!2.61e-09!6;CL:0000311!2.61e-09!6;CL:0000079!2.61e-09!6;CL:0000237!2.61e-09!6;CL:0000036!2.61e-09!6;CL:0000357!2.61e-09!6;CL:0000114!2.61e-09!6;CL:0000154!9.34e-09!6;CL:0000220!9.75e-09!246;CL:0002321!1.35e-08!248;CL:0002327!4.69e-08!4;CL:0000575!7.38e-08!2;CL:0000244!2.23e-07!4;CL:0000731!2.23e-07!4;CL:0000317!2.50e-07!2;CL:1000448!2.50e-07!2;CL:0002308!2.50e-07!2;CL:0002140!2.50e-07!2 | |ontology_enrichment_celltype=CL:0002076!1.88e-32!43;CL:0000223!5.17e-24!59;CL:0002159!1.57e-23!13;CL:0000066!2.81e-23!254;CL:0002368!1.38e-22!13;CL:0002251!1.52e-15!21;CL:0002077!1.21e-13!33;CL:0002202!1.27e-12!9;CL:0002632!1.27e-12!9;CL:0000076!1.57e-11!62;CL:0002328!8.86e-11!3;CL:0000622!1.64e-10!5;CL:0002166!2.69e-10!3;CL:0000068!2.86e-10!3;CL:0000069!2.86e-10!3;CL:0000307!2.86e-10!3;CL:0000377!2.86e-10!3;CL:0000362!3.46e-10!8;CL:0002621!1.11e-09!3;CL:0000240!2.61e-09!6;CL:0000311!2.61e-09!6;CL:0000079!2.61e-09!6;CL:0000237!2.61e-09!6;CL:0000036!2.61e-09!6;CL:0000357!2.61e-09!6;CL:0000114!2.61e-09!6;CL:0000154!9.34e-09!6;CL:0000220!9.75e-09!246;CL:0002321!1.35e-08!248;CL:0002327!4.69e-08!4;CL:0000575!7.38e-08!2;CL:0000244!2.23e-07!4;CL:0000731!2.23e-07!4;CL:0000317!2.50e-07!2;CL:1000448!2.50e-07!2;CL:0002308!2.50e-07!2;CL:0002140!2.50e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002159;7.31e-31;14!CL:0002202;1.42e-21;9!CL:0002632;1.42e-21;9!CL:0002368;9.24e-20;13!CL:0002076;4.12e-19;42!CL:0002328;1.51e-17;3!CL:0000307;7.49e-17;3!CL:0002166;1.13e-16;3!CL:0000240;1.68e-15;6!CL:0000311;1.68e-15;6!CL:0000079;1.68e-15;6!CL:0000237;1.68e-15;6!CL:0002077;3.43e-15;34!CL:0002327;6.07e-13;4!CL:0000575;1.57e-12;2!CL:0000312;6.91e-11;5!CL:0000622;1.67e-10;5!CL:0000362;2.29e-10;9!CL:0002251;2.05e-09;20!CL:0000154;7.91e-09;6!CL:0002577;2.84e-08;3!CL:0002623;3.80e-08;3!CL:0002231;7.23e-08;3!CL:0002252;3.83e-07;1!CL:0002336;4.43e-07;1!CL:0002261;4.43e-07;1!CL:0002170;4.43e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,8.43e-31,14;CL:0002076,8.43e-26,42;CL:0002202,2.04e-21,9;CL:0002632,2.04e-21,9;CL:0002368,1.25e-19,13;CL:0000223,8.41e-18,58;CL:0002077,1.46e-17,34;CL:0002328,1.60e-17,3;CL:0000066,2.86e-17,253;CL:0002166,1.10e-16,3;CL:0000068,1.22e-16,3;CL:0000069,1.22e-16,3;CL:0000307,1.22e-16,3;CL:0000377,1.22e-16,3;CL:0000240,1.88e-15,6;CL:0000311,1.88e-15,6;CL:0000079,1.88e-15,6;CL:0000237,1.88e-15,6;CL:0000036,1.88e-15,6;CL:0000357,1.88e-15,6;CL:0000114,1.88e-15,6;CL:0002327,4.47e-13,4;CL:0000575,1.81e-12,2;CL:0000312,7.38e-11,5;CL:0000622,1.62e-10,5;CL:0000362,2.40e-10,9;CL:0002321,4.08e-10,250;CL:0002251,2.01e-09,20;CL:0000154,7.71e-09,6;CL:0000221,2.18e-08,72;CL:0002577,2.46e-08,3;CL:0002623,3.67e-08,3;CL:0002231,7.76e-08,3;CL:0002252,3.95e-07,1;CL:0002336,4.69e-07,1;CL:0002261,4.69e-07,1;CL:0002170,4.69e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;7.49e-17;3!CL:0000357;1.68e-15;6!CL:0000114;1.68e-15;6!CL:0000223;2.65e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!5.51e-15!14 | |ontology_enrichment_disease=DOID:1749!5.51e-15!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;6.06e-07;1!DOID:3149;6.06e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.57e-07,1;DOID:3149,5.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.91e-16!72;UBERON:0004119!4.57e-14!169;UBERON:0000925!4.57e-14!169;UBERON:0006595!4.57e-14!169;UBERON:0000166!1.18e-12!21;UBERON:0000161!1.00e-11!35;UBERON:0000165!4.58e-11!28;UBERON:0000930!4.58e-11!28;UBERON:0000065!7.96e-11!53;UBERON:0004815!8.86e-11!3;UBERON:0002031!8.86e-11!3;UBERON:0003102!2.32e-10!95;UBERON:0007196!3.03e-10!14;UBERON:0001558!3.03e-10!14;UBERON:0003729!4.23e-10!5;UBERON:0001723!1.01e-09!3;UBERON:0001033!1.01e-09!3;UBERON:0010056!1.01e-09!3;UBERON:0001949!1.11e-09!3;UBERON:0002185!3.61e-08!4;UBERON:0001444!4.43e-08!48;UBERON:0001911!4.69e-08!4;UBERON:0005333!4.69e-08!4;UBERON:0008425!4.69e-08!4;UBERON:0005311!4.69e-08!4;UBERON:0001708!8.20e-08!4;UBERON:0001704!8.20e-08!4;UBERON:0001007!2.18e-07!155;UBERON:0001555!2.18e-07!155;UBERON:0007026!2.18e-07!155;UBERON:0002419!2.50e-07!2;UBERON:0007771!2.50e-07!2;UBERON:0003297!2.50e-07!2;UBERON:0001821!2.50e-07!2;UBERON:0003487!2.50e-07!2;UBERON:0001820!2.50e-07!2;UBERON:0005089!2.50e-07!2;UBERON:0005088!2.50e-07!2;UBERON:0003343!2.91e-07!4;UBERON:0004785!2.91e-07!4;UBERON:0005178!3.04e-07!34;UBERON:0002224!3.04e-07!34;UBERON:0003126!3.48e-07!7;UBERON:0001005!3.48e-07!7;UBERON:0005181!5.57e-07!35;UBERON:0000072!5.60e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.51e-17;3!UBERON:0002031;1.51e-17;3!UBERON:0001911;6.07e-13;4!UBERON:0007196;1.00e-12;15!UBERON:0001558;1.00e-12;15!UBERON:0001708;1.21e-12;4!UBERON:0008895;1.21e-12;4!UBERON:0002185;9.93e-11;5!UBERON:0011159;3.24e-10;5!UBERON:0000165;1.43e-08;28!UBERON:0001723;7.23e-08;3!UBERON:0001033;7.23e-08;3!UBERON:0000485;8.69e-08;7!UBERON:0003126;1.69e-07;7!UBERON:0001005;1.69e-07;7!UBERON:0005178;3.44e-07;34!UBERON:0002224;3.44e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.60e-17,3;UBERON:0002031,1.60e-17,3;UBERON:0003102,9.78e-16,99;UBERON:0001911,4.47e-13,4;UBERON:0005333,4.47e-13,4;UBERON:0008425,4.47e-13,4;UBERON:0005311,4.47e-13,4;UBERON:0001708,1.19e-12,4;UBERON:0008895,1.19e-12,4;UBERON:0007196,1.24e-12,15;UBERON:0001558,1.24e-12,15;UBERON:0000033,1.40e-11,56;UBERON:0002185,1.03e-10,5;UBERON:0000153,3.11e-10,62;UBERON:0007811,3.11e-10,62;UBERON:0011159,3.19e-10,5;UBERON:0005157,6.56e-10,47;UBERON:0001004,1.19e-09,74;UBERON:0004119,4.03e-09,160;UBERON:0000925,4.03e-09,160;UBERON:0006595,4.03e-09,160;UBERON:0010188,1.35e-08,6;UBERON:0002539,1.35e-08,6;UBERON:0008816,1.35e-08,6;UBERON:0000165,2.78e-08,29;UBERON:0000930,2.78e-08,29;UBERON:0000161,2.85e-08,36;UBERON:0005153,2.88e-08,37;UBERON:0000166,2.95e-08,22;UBERON:0001723,6.06e-08,3;UBERON:0001033,6.06e-08,3;UBERON:0010056,6.06e-08,3;UBERON:0001444,1.51e-07,49;UBERON:0003126,2.06e-07,7;UBERON:0001005,2.06e-07,7;UBERON:0008814,3.42e-07,18;UBERON:0005178,4.49e-07,34;UBERON:0002224,4.49e-07,34;UBERON:0005181,7.59e-07,35;UBERON:0000076,9.27e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,4.51808878167375,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27865759463288,11.1235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,8.34102169105554,2.24803506515239,8.24337573775373,5.09236448371913,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.17587489739202,2.97727704209012,1.97028749946266,2.90633938513962,7.28427090413901,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66880657181771,0,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,1.65745780084613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,5.20048196829217,0,0,0,0,0,0,0,0,0,1.32227932288782,0.960950336825531,0.638063562472921,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,3.35151137767894,2.17781969722645,0,0.43050537267123,0,5.32116184244011,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,2.09135616417905,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.609414446062818,0,0,0,0,0,0.581934098930517,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68978156359193,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,2.93485757634686,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,1.24329698497822,3.7558064960669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95945073107265,1.36893320434112,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,4.51808878167375,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27865759463288,11.1235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,8.34102169105554,2.24803506515239,8.24337573775373,5.09236448371913,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.17587489739202,2.97727704209012,1.97028749946266,2.90633938513962,7.28427090413901,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66880657181771,0,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,1.65745780084613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,5.20048196829217,0,0,0,0,0,0,0,0,0,1.32227932288782,0.960950336825531,0.638063562472921,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,3.35151137767894,2.17781969722645,0,0.43050537267123,0,5.32116184244011,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,2.09135616417905,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.609414446062818,0,0,0,0,0,0.581934098930517,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68978156359193,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,2.93485757634686,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,1.24329698497822,3.7558064960669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95945073107265,1.36893320434112,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr12:52910911..52910946,+ | |short_description=p@chr12:52910911..52910946,+ | ||
}} | }} |
Latest revision as of 09:36, 24 July 2015
Short description: | p@chr12:52910911..52910946, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52910911..52910946, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.57e-07 | 1 |
keratoacanthoma | 5.57e-07 | 1 |