FFCP PHASE1:Hg19::chr12:52911720..52911745,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52911720..52911745,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52911720..52911745,+ | |description=CAGE_peak_at_chr12:52911720..52911745,+ | ||
|id=chr12:52911720..52911745,+ | |id=chr12:52911720..52911745,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.89e-35!43;CL:0000223!1.05e-23!59;CL:0000066!2.57e-22!254;CL:0002368!5.33e-21!13;CL:0002159!1.60e-17!13;CL:0002251!9.77e-17!21;CL:0000244!1.82e-12!4;CL:0000731!1.82e-12!4;CL:0002202!7.12e-12!9;CL:0002632!7.12e-12!9;CL:0000076!8.38e-12!62;CL:0002077!2.71e-10!33;CL:0002328!2.83e-10!3;CL:0000068!1.14e-09!3;CL:0000069!1.14e-09!3;CL:0000307!1.14e-09!3;CL:0000377!1.14e-09!3;CL:0000622!1.50e-09!5;CL:0000362!3.12e-09!8;CL:0002621!6.77e-09!3;CL:0000240!1.13e-08!6;CL:0000311!1.13e-08!6;CL:0000079!1.13e-08!6;CL:0000237!1.13e-08!6;CL:0000036!1.13e-08!6;CL:0000357!1.13e-08!6;CL:0000114!1.13e-08!6;CL:0000154!5.92e-08!6;CL:0000220!1.02e-07!246;CL:0002327!1.31e-07!4;CL:0002321!1.38e-07!248;CL:0000575!1.87e-07!2 | |ontology_enrichment_celltype=CL:0002076!3.89e-35!43;CL:0000223!1.05e-23!59;CL:0000066!2.57e-22!254;CL:0002368!5.33e-21!13;CL:0002159!1.60e-17!13;CL:0002251!9.77e-17!21;CL:0000244!1.82e-12!4;CL:0000731!1.82e-12!4;CL:0002202!7.12e-12!9;CL:0002632!7.12e-12!9;CL:0000076!8.38e-12!62;CL:0002077!2.71e-10!33;CL:0002328!2.83e-10!3;CL:0000068!1.14e-09!3;CL:0000069!1.14e-09!3;CL:0000307!1.14e-09!3;CL:0000377!1.14e-09!3;CL:0000622!1.50e-09!5;CL:0000362!3.12e-09!8;CL:0002621!6.77e-09!3;CL:0000240!1.13e-08!6;CL:0000311!1.13e-08!6;CL:0000079!1.13e-08!6;CL:0000237!1.13e-08!6;CL:0000036!1.13e-08!6;CL:0000357!1.13e-08!6;CL:0000114!1.13e-08!6;CL:0000154!5.92e-08!6;CL:0000220!1.02e-07!246;CL:0002327!1.31e-07!4;CL:0002321!1.38e-07!248;CL:0000575!1.87e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002159;5.30e-25;14!CL:0002328;2.67e-18;3!CL:0002076;2.14e-17;42!CL:0002202;5.74e-16;9!CL:0002632;5.74e-16;9!CL:0000240;8.14e-16;6!CL:0000311;8.14e-16;6!CL:0000079;8.14e-16;6!CL:0000237;8.14e-16;6!CL:0002368;2.53e-15;13!CL:0000244;1.63e-13;4!CL:0000731;1.63e-13;4!CL:0002327;1.74e-13;4!CL:0000575;6.81e-13;2!CL:0000312;4.67e-11;5!CL:0002077;1.01e-10;34!CL:0000622;1.99e-10;5!CL:0000362;2.61e-10;9!CL:0002251;1.51e-09;20!CL:0000154;9.07e-09;6!CL:0000307;1.57e-08;3!CL:0002166;1.83e-08;3!CL:0002623;2.42e-08;3!CL:0002231;3.43e-08;3!CL:0002336;2.82e-07;1!CL:0002261;2.82e-07;1!CL:0002170;2.82e-07;1!CL:0002252;4.64e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,6.13e-25,14;CL:0002076,2.95e-23,42;CL:0002328,2.75e-18,3;CL:0000066,4.28e-18,253;CL:0000223,4.90e-16,58;CL:0002202,5.24e-16,9;CL:0002632,5.24e-16,9;CL:0000240,8.14e-16,6;CL:0000311,8.14e-16,6;CL:0000079,8.14e-16,6;CL:0000237,8.14e-16,6;CL:0000036,8.14e-16,6;CL:0000357,8.14e-16,6;CL:0000114,8.14e-16,6;CL:0002368,2.38e-15,13;CL:0000244,1.56e-13,4;CL:0000731,1.56e-13,4;CL:0002327,1.63e-13,4;CL:0000575,7.02e-13,2;CL:0002077,5.19e-12,34;CL:0000312,4.67e-11,5;CL:0000622,2.03e-10,5;CL:0000362,2.71e-10,9;CL:0002251,1.42e-09,20;CL:0000154,9.20e-09,6;CL:0000076,1.07e-08,63;CL:0000068,1.38e-08,3;CL:0000069,1.38e-08,3;CL:0000307,1.38e-08,3;CL:0000377,1.38e-08,3;CL:0002166,2.01e-08,3;CL:0002623,2.33e-08,3;CL:0002231,3.50e-08,3;CL:0002321,9.26e-08,250;CL:0002336,2.82e-07,1;CL:0002261,2.82e-07,1;CL:0002170,2.82e-07,1;CL:0002252,5.06e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;8.14e-16;6!CL:0000114;8.14e-16;6!CL:0000223;2.62e-09;58!CL:0000377;1.57e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!1.41e-17!14 | |ontology_enrichment_disease=DOID:1749!1.41e-17!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;7.15e-07;1!DOID:3149;7.15e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,8.98e-07,1;DOID:3149,8.98e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.26e-17!72;UBERON:0004119!4.11e-14!169;UBERON:0000925!4.11e-14!169;UBERON:0006595!4.11e-14!169;UBERON:0003729!6.21e-14!5;UBERON:0000166!1.15e-13!21;UBERON:0007196!2.89e-12!14;UBERON:0001558!2.89e-12!14;UBERON:0000161!3.34e-12!35;UBERON:0000165!9.15e-12!28;UBERON:0000930!9.15e-12!28;UBERON:0003343!4.50e-11!4;UBERON:0004785!4.50e-11!4;UBERON:0000065!5.03e-11!53;UBERON:0004815!2.83e-10!3;UBERON:0002031!2.83e-10!3;UBERON:0000365!5.79e-10!5;UBERON:0003102!5.88e-10!95;UBERON:0003126!5.93e-10!7;UBERON:0001005!5.93e-10!7;UBERON:0000974!5.27e-09!10;UBERON:0001949!6.77e-09!3;UBERON:0001444!2.37e-08!48;UBERON:0005910!2.72e-08!6;UBERON:0002185!8.83e-08!4;UBERON:0000344!1.14e-07!12;UBERON:0001911!1.31e-07!4;UBERON:0005333!1.31e-07!4;UBERON:0008425!1.31e-07!4;UBERON:0005311!1.31e-07!4;UBERON:0000072!2.27e-07!46;UBERON:0001007!6.45e-07!155;UBERON:0001555!6.45e-07!155;UBERON:0007026!6.45e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.67e-18;3!UBERON:0002031;2.67e-18;3!UBERON:0001911;1.74e-13;4!UBERON:0002185;3.50e-11;5!UBERON:0000365;6.55e-11;5!UBERON:0007196;1.76e-09;15!UBERON:0001558;1.76e-09;15!UBERON:0005910;3.62e-09;6!UBERON:0000485;4.13e-08;7!UBERON:0000486;1.13e-07;12!UBERON:0000964;7.48e-07;4!UBERON:0010409;7.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.75e-18,3;UBERON:0002031,2.75e-18,3;UBERON:0001911,1.63e-13,4;UBERON:0005333,1.63e-13,4;UBERON:0008425,1.63e-13,4;UBERON:0005311,1.63e-13,4;UBERON:0003102,1.17e-12,99;UBERON:0002185,3.56e-11,5;UBERON:0000365,6.33e-11,5;UBERON:0005157,2.17e-10,47;UBERON:0007196,1.67e-09,15;UBERON:0001558,1.67e-09,15;UBERON:0005910,3.52e-09,6;UBERON:0005153,1.16e-08,37;UBERON:0004119,1.59e-08,160;UBERON:0000925,1.59e-08,160;UBERON:0006595,1.59e-08,160;UBERON:0000033,2.91e-08,56;UBERON:0000153,2.70e-07,62;UBERON:0007811,2.70e-07,62;UBERON:0001004,4.24e-07,74;UBERON:0000076,5.58e-07,8;UBERON:0000964,7.59e-07,4;UBERON:0010409,7.59e-07,4;UBERON:0004348,7.59e-07,4;UBERON:0005427,7.59e-07,4 | |||
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| ||
|short_description=p@chr12:52911720..52911745,+ | |short_description=p@chr12:52911720..52911745,+ | ||
}} | }} |
Latest revision as of 09:37, 24 July 2015
Short description: | p@chr12:52911720..52911745, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52911720..52911745, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.75e-18 | 3 |
epithelium of bronchus | 2.75e-18 | 3 |
mammary gland | 1.63e-13 | 4 |
mammary bud | 1.63e-13 | 4 |
mammary ridge | 1.63e-13 | 4 |
mammary placode | 1.63e-13 | 4 |
surface structure | 1.17e-12 | 99 |
bronchus | 3.56e-11 | 5 |
urothelium | 6.33e-11 | 5 |
epithelial fold | 2.17e-10 | 47 |
tracheobronchial tree | 1.67e-09 | 15 |
lower respiratory tract | 1.67e-09 | 15 |
transitional epithelium | 3.52e-09 | 6 |
epithelial bud | 1.16e-08 | 37 |
endoderm-derived structure | 1.59e-08 | 160 |
endoderm | 1.59e-08 | 160 |
presumptive endoderm | 1.59e-08 | 160 |
head | 2.91e-08 | 56 |
anterior region of body | 2.70e-07 | 62 |
craniocervical region | 2.70e-07 | 62 |
respiratory system | 4.24e-07 | 74 |
external ectoderm | 5.58e-07 | 8 |
cornea | 7.59e-07 | 4 |
eye surface | 7.59e-07 | 4 |
optic eminence | 7.59e-07 | 4 |
corneal primordium | 7.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 8.98e-07 | 1 |
keratoacanthoma | 8.98e-07 | 1 |