FFCP PHASE1:Hg19::chr14:91730909..91730921,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:91730909..91730921,- | |||
|description=CAGE_peak_at_chr14:91730909..91730921,- | |description=CAGE_peak_at_chr14:91730909..91730921,- | ||
|id=chr14:91730909..91730921,- | |id=chr14:91730909..91730921,- | ||
|ontology_enrichment_celltype=CL:0002368!9.17e-11!13;CL:0002076!4.66e-10!43;CL:0000244!1.47e-07!4;CL:0000731!1.47e-07!4 | |ontology_enrichment_celltype=CL:0002368!9.17e-11!13;CL:0002076!4.66e-10!43;CL:0000244!1.47e-07!4;CL:0000731!1.47e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000244;9.54e-28;4!CL:0000731;9.54e-28;4!CL:0002368;1.38e-23;13!CL:0002166;9.98e-21;3!CL:0002076;1.31e-20;42!CL:0002621;2.28e-20;3!CL:0002328;3.61e-20;3!CL:0002202;6.74e-18;9!CL:0002632;6.74e-18;9!CL:0002159;1.64e-11;14!CL:0000307;1.40e-09;3!CL:0002582;2.40e-09;3!CL:0002251;6.57e-08;20!CL:0000228;1.26e-07;1!CL:0002252;1.26e-07;1!CL:0002372;1.26e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.95e-28,4;CL:0000731,8.95e-28,4;CL:0002368,2.09e-23,13;CL:0002076,2.37e-23,42;CL:0002166,5.68e-21,3;CL:0002621,2.97e-20,3;CL:0002328,4.12e-20,3;CL:0002202,1.05e-17,9;CL:0002632,1.05e-17,9;CL:0000223,3.20e-16,58;CL:0002159,1.35e-11,14;CL:0002582,2.12e-09,3;CL:0000068,2.21e-09,3;CL:0000069,2.21e-09,3;CL:0000307,2.21e-09,3;CL:0000377,2.21e-09,3;CL:0000066,3.85e-08,253;CL:0002251,6.48e-08,20;CL:0002252,7.97e-08,1;CL:0000228,1.18e-07,1;CL:0002372,1.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;1.40e-09;3!CL:0000223;3.34e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005910!7.75e-09!6;UBERON:0000365!2.91e-08!5;UBERON:0001708!5.44e-07!4;UBERON:0001704!5.44e-07!4;UBERON:0004119!6.80e-07!169;UBERON:0000925!6.80e-07!169;UBERON:0006595!6.80e-07!169;UBERON:0000153!7.49e-07!129;UBERON:0007811!7.49e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.07e-26;12!UBERON:0000365;3.03e-22;5!UBERON:0001949;2.28e-20;3!UBERON:0004815;3.61e-20;3!UBERON:0002031;3.61e-20;3!UBERON:0005910;1.43e-18;6!UBERON:0001708;1.09e-15;4!UBERON:0008895;1.09e-15;4!UBERON:0005911;2.49e-13;36!UBERON:0011159;1.17e-12;5!UBERON:0002185;2.50e-12;5!UBERON:0007196;1.14e-10;15!UBERON:0001558;1.14e-10;15!UBERON:0004807;3.29e-10;22!UBERON:0003929;4.99e-09;7!UBERON:0000485;6.04e-09;7!UBERON:0003350;5.90e-08;8!UBERON:0001828;5.90e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.88e-22,5;UBERON:0001949,2.97e-20,3;UBERON:0004815,4.12e-20,3;UBERON:0002031,4.12e-20,3;UBERON:0005910,1.37e-18,6;UBERON:0001708,7.14e-16,4;UBERON:0008895,7.14e-16,4;UBERON:0011159,8.38e-13,5;UBERON:0002185,2.71e-12,5;UBERON:0010188,9.46e-11,6;UBERON:0002539,9.46e-11,6;UBERON:0008816,9.46e-11,6;UBERON:0007196,1.48e-10,15;UBERON:0001558,1.48e-10,15;UBERON:0001004,1.59e-08,74;UBERON:0004119,2.78e-08,160;UBERON:0000925,2.78e-08,160;UBERON:0006595,2.78e-08,160;UBERON:0003350,6.50e-08,8;UBERON:0001828,6.50e-08,8;UBERON:0004807,7.19e-08,28;UBERON:0005911,8.90e-08,82;UBERON:0003102,3.73e-07,99;UBERON:0000485,4.90e-07,9 | |||
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| ||
|short_description=p@chr14:91730909..91730921,- | |short_description=p@chr14:91730909..91730921,- | ||
}} | }} |
Latest revision as of 23:35, 24 July 2015
Short description: | p@chr14:91730909..91730921, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:91730909..91730921, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.95e-28 | 4 |
urothelial cell | 8.95e-28 | 4 |
respiratory epithelial cell | 2.09e-23 | 13 |
endo-epithelial cell | 2.37e-23 | 42 |
epithelial cell of Malassez | 5.68e-21 | 3 |
gingival epithelial cell | 2.97e-20 | 3 |
bronchial epithelial cell | 4.12e-20 | 3 |
epithelial cell of tracheobronchial tree | 1.05e-17 | 9 |
epithelial cell of lower respiratory tract | 1.05e-17 | 9 |
endodermal cell | 3.20e-16 | 58 |
general ecto-epithelial cell | 1.35e-11 | 14 |
visceral preadipocyte | 2.12e-09 | 3 |
duct epithelial cell | 2.21e-09 | 3 |
branched duct epithelial cell | 2.21e-09 | 3 |
tracheal epithelial cell | 2.21e-09 | 3 |
tracheoblast | 2.21e-09 | 3 |
epithelial cell | 3.85e-08 | 253 |
epithelial cell of alimentary canal | 6.48e-08 | 20 |
epithelial cell of esophagus | 7.97e-08 | 1 |
multinucleate cell | 1.18e-07 | 1 |
myotube | 1.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.88e-22 | 5 |
gingival epithelium | 2.97e-20 | 3 |
lower respiratory tract epithelium | 4.12e-20 | 3 |
epithelium of bronchus | 4.12e-20 | 3 |
transitional epithelium | 1.37e-18 | 6 |
jaw skeleton | 7.14e-16 | 4 |
splanchnocranium | 7.14e-16 | 4 |
primary subdivision of cranial skeletal system | 8.38e-13 | 5 |
bronchus | 2.71e-12 | 5 |
protuberance | 9.46e-11 | 6 |
pharyngeal arch | 9.46e-11 | 6 |
embryonic head | 9.46e-11 | 6 |
tracheobronchial tree | 1.48e-10 | 15 |
lower respiratory tract | 1.48e-10 | 15 |
respiratory system | 1.59e-08 | 74 |
endoderm-derived structure | 2.78e-08 | 160 |
endoderm | 2.78e-08 | 160 |
presumptive endoderm | 2.78e-08 | 160 |
epithelium of mucosa | 6.50e-08 | 8 |
gingiva | 6.50e-08 | 8 |
respiratory system epithelium | 7.19e-08 | 28 |
endo-epithelium | 8.90e-08 | 82 |
surface structure | 3.73e-07 | 99 |
simple columnar epithelium | 4.90e-07 | 9 |