FFCP PHASE1:Hg19::chr20:62273969..62273982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:62273969..62273982,- | |||
|description=CAGE_peak_at_chr20:62273969..62273982,- | |description=CAGE_peak_at_chr20:62273969..62273982,- | ||
|id=chr20:62273969..62273982,- | |id=chr20:62273969..62273982,- | ||
|ontology_enrichment_celltype=CL:0000066!5.22e-20!254;CL:0002076!2.99e-11!43;CL:0000223!1.65e-10!59;CL:1000449!1.99e-08!16;CL:0002681!8.88e-08!13;CL:0002584!8.88e-08!13;CL:1000507!3.68e-07!12;CL:1000494!3.68e-07!12;CL:1000497!5.08e-07!18;CL:0002518!5.08e-07!18;CL:0002368!6.66e-07!13;CL:0000082!8.33e-07!19 | |ontology_enrichment_celltype=CL:0000066!5.22e-20!254;CL:0002076!2.99e-11!43;CL:0000223!1.65e-10!59;CL:1000449!1.99e-08!16;CL:0002681!8.88e-08!13;CL:0002584!8.88e-08!13;CL:1000507!3.68e-07!12;CL:1000494!3.68e-07!12;CL:1000497!5.08e-07!18;CL:0002518!5.08e-07!18;CL:0002368!6.66e-07!13;CL:0000082!8.33e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.65e-17;5!CL:0002681;1.43e-16;12!CL:0002584;1.43e-16;12!CL:1000449;2.31e-16;15!CL:1000507;3.75e-15;10!CL:1000494;3.75e-15;10!CL:1000497;3.06e-14;17!CL:0002518;3.06e-14;17!CL:0000239;1.31e-10;3!CL:1000615;1.31e-10;3!CL:0002306;1.31e-10;3!CL:0000082;2.01e-10;19!CL:1000746;6.71e-08;7!CL:1000612;6.71e-08;7!CL:0000650;2.00e-07;2!CL:1000500;2.00e-07;2!CL:1000618;2.00e-07;2!CL:1001318;2.00e-07;2!CL:0002173;2.00e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.76e-17,5;CL:0000066,9.18e-17,253;CL:0002681,1.25e-16,12;CL:0002584,1.25e-16,12;CL:1000449,1.87e-16,15;CL:1000507,2.32e-15,10;CL:1000494,2.32e-15,10;CL:1000497,2.54e-14,17;CL:0002518,2.54e-14,17;CL:0000239,9.92e-11,3;CL:1000615,9.92e-11,3;CL:0002306,9.92e-11,3;CL:0000082,1.68e-10,19;CL:1000746,9.05e-08,7;CL:1000612,9.05e-08,7;CL:0000650,2.45e-07,2;CL:1000500,2.45e-07,2;CL:1000618,2.45e-07,2;CL:1001318,2.45e-07,2;CL:0002173,2.45e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.27e-08;10!UBERON:0005564;1.27e-08;10 | |||
|ontology_enrichment_disease=DOID:305!1.39e-19!106;DOID:0050687!1.78e-14!143;DOID:299!1.96e-10!25;DOID:1749!9.65e-07!14 | |ontology_enrichment_disease=DOID:305!1.39e-19!106;DOID:0050687!1.78e-14!143;DOID:299!1.96e-10!25;DOID:1749!9.65e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:299;2.19e-12;25!DOID:1324;1.50e-10;15!DOID:0050615;8.00e-10;16!DOID:5093;5.04e-09;4!DOID:1612;5.04e-09;4!DOID:1749;7.21e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.85e-17,106;DOID:299,2.10e-12,25;DOID:0050687,6.76e-11,143;DOID:1324,1.34e-10,15;DOID:0050615,7.18e-10,16;DOID:5093,4.68e-09,4;DOID:1612,4.68e-09,4;DOID:1749,5.03e-08,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001225;1.43e-16;12!UBERON:0008987;1.43e-16;12!UBERON:0006555;2.31e-16;15!UBERON:0004819;2.31e-16;15!UBERON:0001285;2.31e-16;15!UBERON:0007684;2.31e-16;15!UBERON:0004211;3.75e-15;10!UBERON:0009773;3.75e-15;10!UBERON:0001231;3.75e-15;10!UBERON:0004810;3.75e-15;10!UBERON:0001851;5.47e-13;15!UBERON:0000353;5.47e-13;15!UBERON:0004807;4.63e-11;22!UBERON:0006853;1.31e-10;3!UBERON:0007685;1.31e-10;3!UBERON:0004134;1.31e-10;3!UBERON:0004802;2.01e-10;19!UBERON:0000115;2.01e-10;19!UBERON:0002113;1.32e-09;24!UBERON:0011143;1.32e-09;24!UBERON:0000489;1.77e-09;29!UBERON:0006554;4.23e-09;30!UBERON:0001008;4.23e-09;30!UBERON:0002048;8.16e-09;22!UBERON:0000117;8.16e-09;22!UBERON:0000171;8.16e-09;22!UBERON:0000170;8.16e-09;22!UBERON:0000074;6.71e-08;7!UBERON:0001229;6.71e-08;7!UBERON:0003567;2.00e-07;2!UBERON:0003838;2.00e-07;2!UBERON:0003586;2.00e-07;2!UBERON:0005169;2.00e-07;2!UBERON:0002321;2.00e-07;2!UBERON:0005215;2.00e-07;2!UBERON:0002303;2.00e-07;2!UBERON:0002319;2.00e-07;2!UBERON:0005911;3.25e-07;36 | |||
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| ||
|short_description=p@chr20:62273969..62273982,- | |short_description=p@chr20:62273969..62273982,- | ||
}} | }} |
Latest revision as of 16:22, 28 July 2015
Short description: | p@chr20:62273969..62273982, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:62273969..62273982, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.76e-17 | 5 |
epithelial cell | 9.18e-17 | 253 |
kidney cortical cell | 1.25e-16 | 12 |
renal cortical epithelial cell | 1.25e-16 | 12 |
epithelial cell of nephron | 1.87e-16 | 15 |
kidney tubule cell | 2.32e-15 | 10 |
nephron tubule epithelial cell | 2.32e-15 | 10 |
kidney cell | 2.54e-14 | 17 |
kidney epithelial cell | 2.54e-14 | 17 |
brush border epithelial cell | 9.92e-11 | 3 |
kidney cortex tubule cell | 9.92e-11 | 3 |
epithelial cell of proximal tubule | 9.92e-11 | 3 |
epithelial cell of lung | 1.68e-10 | 19 |
glomerular cell | 9.05e-08 | 7 |
kidney corpuscule cell | 9.05e-08 | 7 |
mesangial cell | 2.45e-07 | 2 |
kidney interstitial cell | 2.45e-07 | 2 |
juxtaglomerular complex cell | 2.45e-07 | 2 |
renal interstitial pericyte | 2.45e-07 | 2 |
extraglomerular mesangial cell | 2.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.85e-17 | 106 |
adenocarcinoma | 2.10e-12 | 25 |
cell type cancer | 6.76e-11 | 143 |
lung cancer | 1.34e-10 | 15 |
respiratory system cancer | 7.18e-10 | 16 |
thoracic cancer | 4.68e-09 | 4 |
breast cancer | 4.68e-09 | 4 |
squamous cell carcinoma | 5.03e-08 | 14 |