FFCP PHASE1:Hg19::chr3:98700032..98700043,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:98700032..98700043,+ to FFCP PHASE1:Hg19::chr3:98700032..98700043,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=130bp_to_ENST00000473756_5end | |||
|cluster_id=chr3:98700032..98700043,+ | |||
|coexpression_cluster_id=C1081 | |||
|description=CAGE_peak_7_at_ENST00000473756_5end | |||
|id=chr3:98700032..98700043,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.21e-09!679;CL:0000004!2.21e-09!679;CL:0000255!2.21e-09!679;CL:1000497!2.39e-09!18;CL:0002518!2.39e-09!18;CL:0000012!3.51e-09!682;CL:1000507!2.62e-08!12;CL:1000494!2.62e-08!12;CL:0002274!1.16e-07!5;CL:0000457!1.16e-07!5;CL:0002191!1.16e-07!5;CL:0000097!1.16e-07!5;CL:0000831!1.16e-07!5;CL:0002028!1.16e-07!5;CL:0000680!2.57e-07!57;CL:0000056!2.57e-07!57;CL:0000355!2.57e-07!57;CL:1000449!3.14e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.88e-28;10!CL:1000494;8.88e-28;10!CL:1000497;7.30e-20;17!CL:0002518;7.30e-20;17!CL:1000449;4.38e-18;15!CL:0000064;2.44e-14;3!CL:0000067;2.44e-14;3!CL:0005012;2.44e-14;3!CL:0002304;2.44e-14;3!CL:0000239;6.09e-14;3!CL:1000615;6.09e-14;3!CL:0002306;6.09e-14;3!CL:0002166;1.71e-13;3!CL:0002681;8.21e-13;12!CL:0002584;8.21e-13;12!CL:0000075;7.61e-12;27 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.31e-28,10;CL:1000494,5.31e-28,10;CL:1000497,3.77e-20,17;CL:0002518,3.77e-20,17;CL:1000449,3.13e-18,15;CL:0000064,1.28e-14,3;CL:0000067,1.28e-14,3;CL:0005012,1.28e-14,3;CL:0002304,1.28e-14,3;CL:0000239,4.70e-14,3;CL:1000615,4.70e-14,3;CL:0002306,4.70e-14,3;CL:0002166,1.61e-13,3;CL:0002681,6.14e-13,12;CL:0002584,6.14e-13,12;CL:0000075,5.36e-12,27;CL:0000066,7.54e-11,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060072!6.99e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.94e-07;3!DOID:127;6.94e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.19e-07,3;DOID:127,6.19e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0005256!7.96e-11!143;UBERON:0007625!1.30e-10!11;UBERON:0000119!5.72e-09!312;UBERON:0000483!7.63e-09!309;UBERON:0009773!2.62e-08!12;UBERON:0001231!2.62e-08!12;UBERON:0004810!2.62e-08!12;UBERON:0000486!4.75e-08!82;UBERON:0000488!1.33e-07!4;UBERON:0004211!3.14e-07!16;UBERON:0001285!3.14e-07!16;UBERON:0007684!3.14e-07!16;UBERON:0003220!3.14e-07!16;UBERON:0004208!3.14e-07!16;UBERON:0003914!6.61e-07!118;UBERON:0006554!8.31e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;8.88e-28;10!UBERON:0009773;8.88e-28;10!UBERON:0001231;8.88e-28;10!UBERON:0004810;8.88e-28;10!UBERON:0000488;3.02e-18;4!UBERON:0006555;4.38e-18;15!UBERON:0004819;4.38e-18;15!UBERON:0001285;4.38e-18;15!UBERON:0007684;4.38e-18;15!UBERON:0001778;2.44e-14;3!UBERON:0001775;2.44e-14;3!UBERON:0007625;5.95e-14;11!UBERON:0006853;6.09e-14;3!UBERON:0007685;6.09e-14;3!UBERON:0004134;6.09e-14;3!UBERON:0002113;1.36e-13;24!UBERON:0011143;1.36e-13;24!UBERON:0006554;4.12e-13;30!UBERON:0001008;4.12e-13;30!UBERON:0001225;8.21e-13;12!UBERON:0008987;8.21e-13;12!UBERON:0002203;3.33e-12;6!UBERON:0001768;3.33e-12;6!UBERON:0002200;3.33e-12;6!UBERON:0000489;5.72e-11;29!UBERON:0001801;7.88e-11;14!UBERON:0001708;3.04e-10;4!UBERON:0008895;3.04e-10;4!UBERON:0001851;4.00e-10;15!UBERON:0000353;4.00e-10;15!UBERON:0011159;2.76e-08;5!UBERON:0000019;8.16e-08;19!UBERON:0000047;8.16e-08;19!UBERON:0004088;8.16e-08;19!UBERON:0010230;8.16e-08;19!UBERON:0000970;2.16e-07;20!UBERON:0002104;5.20e-07;21!UBERON:0001456;5.20e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.31e-28,10;UBERON:0000488,1.36e-18,4;UBERON:0004211,3.13e-18,15;UBERON:0009773,3.13e-18,15;UBERON:0001231,3.13e-18,15;UBERON:0001285,3.13e-18,15;UBERON:0007684,3.13e-18,15;UBERON:0004208,3.13e-18,15;UBERON:0006555,5.23e-17,16;UBERON:0004819,5.23e-17,16;UBERON:0001778,1.28e-14,3;UBERON:0001775,1.28e-14,3;UBERON:0007625,3.42e-14,11;UBERON:0006853,4.70e-14,3;UBERON:0007685,4.70e-14,3;UBERON:0004134,4.70e-14,3;UBERON:0001225,6.14e-13,12;UBERON:0008987,6.14e-13,12;UBERON:0002113,1.33e-12,26;UBERON:0003918,1.33e-12,26;UBERON:0011143,1.33e-12,26;UBERON:0005095,1.33e-12,26;UBERON:0007687,1.33e-12,26;UBERON:0002203,1.98e-12,6;UBERON:0001768,1.98e-12,6;UBERON:0002200,1.98e-12,6;UBERON:0001801,5.14e-11,14;UBERON:0000489,2.63e-10,31;UBERON:0001708,2.91e-10,4;UBERON:0008895,2.91e-10,4;UBERON:0001851,3.18e-10,15;UBERON:0000353,3.18e-10,15;UBERON:0011159,2.67e-08,5;UBERON:0006554,8.46e-08,47;UBERON:0001008,1.34e-07,48;UBERON:0000019,1.62e-07,20;UBERON:0000047,1.62e-07,20;UBERON:0010312,1.62e-07,20;UBERON:0004088,1.62e-07,20;UBERON:0010230,1.62e-07,20;UBERON:0003072,1.62e-07,20;UBERON:0004128,1.62e-07,20;UBERON:0003071,1.62e-07,20;UBERON:0000970,3.96e-07,21;UBERON:0002104,3.96e-07,21;UBERON:0003914,4.91e-07,117;UBERON:0010188,5.50e-07,6;UBERON:0002539,5.50e-07,6;UBERON:0008816,5.50e-07,6;UBERON:0006876,8.55e-07,11;UBERON:0001456,8.94e-07,22 | |||
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| ||
|short_description=p7@ENST00000473756 | |||
}} | }} |
Latest revision as of 00:10, 30 July 2015
Short description: | p7@ENST00000473756 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ENST00000473756_5end |
Coexpression cluster: | C1081_papillotubular_Renal_Mast_giant_meningioma_mucinous_gall |
Association with transcript: | 130bp_to_ENST00000473756_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.31e-28 | 10 |
nephron tubule epithelial cell | 5.31e-28 | 10 |
kidney cell | 3.77e-20 | 17 |
kidney epithelial cell | 3.77e-20 | 17 |
epithelial cell of nephron | 3.13e-18 | 15 |
ciliated cell | 1.28e-14 | 3 |
ciliated epithelial cell | 1.28e-14 | 3 |
multi-ciliated epithelial cell | 1.28e-14 | 3 |
non-pigmented ciliary epithelial cell | 1.28e-14 | 3 |
brush border epithelial cell | 4.70e-14 | 3 |
kidney cortex tubule cell | 4.70e-14 | 3 |
epithelial cell of proximal tubule | 4.70e-14 | 3 |
epithelial cell of Malassez | 1.61e-13 | 3 |
kidney cortical cell | 6.14e-13 | 12 |
renal cortical epithelial cell | 6.14e-13 | 12 |
columnar/cuboidal epithelial cell | 5.36e-12 | 27 |
epithelial cell | 7.54e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.19e-07 | 3 |
leiomyoma | 6.19e-07 | 3 |