FFCP PHASE1:Hg19::chr6:163910203..163910206,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:163910203..163910206,+ | |||
|coexpression_cluster_id=C1279 | |||
|description=CAGE_peak_at_chr6:163910203..163910206,+ | |description=CAGE_peak_at_chr6:163910203..163910206,+ | ||
|id=chr6:163910203..163910206,+ | |id=chr6:163910203..163910206,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.16e-18!76;CL:0000839!1.26e-16!70;CL:0000557!1.88e-16!71;CL:0002009!1.07e-14!65;CL:0002194!2.02e-14!63;CL:0000576!2.02e-14!63;CL:0000040!2.02e-14!63;CL:0000559!2.02e-14!63;CL:0000763!2.53e-14!112;CL:0000049!2.53e-14!112;CL:0002057!2.69e-14!42;CL:0000738!3.83e-14!140;CL:0000860!2.13e-13!45;CL:0000037!8.82e-12!172;CL:0000566!8.82e-12!172;CL:0002032!2.58e-11!165;CL:0000837!2.58e-11!165;CL:0002031!2.93e-11!124;CL:0002087!7.13e-11!119;CL:0000988!9.23e-11!182 | |ontology_enrichment_celltype=CL:0000766!2.16e-18!76;CL:0000839!1.26e-16!70;CL:0000557!1.88e-16!71;CL:0002009!1.07e-14!65;CL:0002194!2.02e-14!63;CL:0000576!2.02e-14!63;CL:0000040!2.02e-14!63;CL:0000559!2.02e-14!63;CL:0000763!2.53e-14!112;CL:0000049!2.53e-14!112;CL:0002057!2.69e-14!42;CL:0000738!3.83e-14!140;CL:0000860!2.13e-13!45;CL:0000037!8.82e-12!172;CL:0000566!8.82e-12!172;CL:0002032!2.58e-11!165;CL:0000837!2.58e-11!165;CL:0002031!2.93e-11!124;CL:0002087!7.13e-11!119;CL:0000988!9.23e-11!182 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.66e-10;6!CL:0002397;1.66e-10;6!CL:0000511;1.58e-07;1!CL:0002625;1.58e-07;1!CL:0000216;1.58e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.76e-08,72;CL:0000860,2.00e-08,42;CL:0002057,2.00e-08,42;CL:0002009,2.25e-08,61;CL:0000511,1.01e-07,1;CL:0002625,1.01e-07,1;CL:0000216,1.01e-07,1;CL:0000557,1.73e-07,67;CL:0000473,3.13e-07,48;CL:0000234,3.13e-07,48;CL:0002393,3.77e-07,9;CL:0002397,3.77e-07,9;CL:0002194,5.15e-07,59;CL:0000576,5.15e-07,59;CL:0000040,5.15e-07,59;CL:0000559,5.15e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.04e-08;1!CL:0002057;2.95e-07;42!UBERON:0005062;4.07e-07;4!UBERON:0007284;4.07e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.45e-19!57;UBERON:0005068!5.45e-19!57;UBERON:0006241!5.45e-19!57;UBERON:0007135!5.45e-19!57;UBERON:0007023!8.42e-17!115;UBERON:0002020!1.08e-16!34;UBERON:0003528!1.08e-16!34;UBERON:0001893!2.33e-16!34;UBERON:0002616!2.91e-16!59;UBERON:0002780!4.87e-16!41;UBERON:0001890!4.87e-16!41;UBERON:0006240!4.87e-16!41;UBERON:0002791!9.98e-16!33;UBERON:0003080!2.19e-15!42;UBERON:0001869!9.32e-15!32;UBERON:0002371!2.20e-14!80;UBERON:0002346!3.55e-14!90;UBERON:0003075!5.79e-14!86;UBERON:0007284!5.79e-14!86;UBERON:0000955!8.14e-14!69;UBERON:0006238!8.14e-14!69;UBERON:0001474!9.28e-14!86;UBERON:0001017!2.78e-13!82;UBERON:0000073!3.40e-13!94;UBERON:0001016!3.40e-13!94;UBERON:0002390!4.81e-13!102;UBERON:0003061!4.81e-13!102;UBERON:0005743!1.73e-12!86;UBERON:0004765!5.61e-12!101;UBERON:0001434!5.61e-12!101;UBERON:0002193!1.77e-11!112;UBERON:0000956!4.16e-11!25;UBERON:0000203!4.16e-11!25;UBERON:0002619!3.63e-09!22;UBERON:0003056!3.98e-09!61;UBERON:0002405!1.64e-08!115;UBERON:0001950!1.45e-07!20;UBERON:0002308!2.56e-07!9;UBERON:0000125!2.56e-07!9;UBERON:0000924!5.01e-07!173;UBERON:0006601!5.01e-07!173;UBERON:0000033!5.46e-07!123;UBERON:0000062!6.19e-07!511;UBERON:0004121!9.12e-07!169 | |ontology_enrichment_uberon=UBERON:0001049!5.45e-19!57;UBERON:0005068!5.45e-19!57;UBERON:0006241!5.45e-19!57;UBERON:0007135!5.45e-19!57;UBERON:0007023!8.42e-17!115;UBERON:0002020!1.08e-16!34;UBERON:0003528!1.08e-16!34;UBERON:0001893!2.33e-16!34;UBERON:0002616!2.91e-16!59;UBERON:0002780!4.87e-16!41;UBERON:0001890!4.87e-16!41;UBERON:0006240!4.87e-16!41;UBERON:0002791!9.98e-16!33;UBERON:0003080!2.19e-15!42;UBERON:0001869!9.32e-15!32;UBERON:0002371!2.20e-14!80;UBERON:0002346!3.55e-14!90;UBERON:0003075!5.79e-14!86;UBERON:0007284!5.79e-14!86;UBERON:0000955!8.14e-14!69;UBERON:0006238!8.14e-14!69;UBERON:0001474!9.28e-14!86;UBERON:0001017!2.78e-13!82;UBERON:0000073!3.40e-13!94;UBERON:0001016!3.40e-13!94;UBERON:0002390!4.81e-13!102;UBERON:0003061!4.81e-13!102;UBERON:0005743!1.73e-12!86;UBERON:0004765!5.61e-12!101;UBERON:0001434!5.61e-12!101;UBERON:0002193!1.77e-11!112;UBERON:0000956!4.16e-11!25;UBERON:0000203!4.16e-11!25;UBERON:0002619!3.63e-09!22;UBERON:0003056!3.98e-09!61;UBERON:0002405!1.64e-08!115;UBERON:0001950!1.45e-07!20;UBERON:0002308!2.56e-07!9;UBERON:0000125!2.56e-07!9;UBERON:0000924!5.01e-07!173;UBERON:0006601!5.01e-07!173;UBERON:0000033!5.46e-07!123;UBERON:0000062!6.19e-07!511;UBERON:0004121!9.12e-07!169 | ||
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| ||
|short_description=p@chr6:163910203..163910206,+ | |short_description=p@chr6:163910203..163910206,+ | ||
}} | }} |
Latest revision as of 21:58, 30 July 2015
Short description: | p@chr6:163910203..163910206, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:163910203..163910206, + |
Coexpression cluster: | C1279_CD14_Neutrophils_substantia_Eosinophils_optic_globus_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.76e-08 | 72 |
classical monocyte | 2.00e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-08 | 42 |
macrophage dendritic cell progenitor | 2.25e-08 | 61 |
androgen binding protein secreting cell | 1.01e-07 | 1 |
seminiferous tubule epithelial cell | 1.01e-07 | 1 |
Sertoli cell | 1.01e-07 | 1 |
granulocyte monocyte progenitor cell | 1.73e-07 | 67 |
defensive cell | 3.13e-07 | 48 |
phagocyte | 3.13e-07 | 48 |
intermediate monocyte | 3.77e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.77e-07 | 9 |
monopoietic cell | 5.15e-07 | 59 |
monocyte | 5.15e-07 | 59 |
monoblast | 5.15e-07 | 59 |
promonocyte | 5.15e-07 | 59 |