FFCP PHASE1:Hg19::chrX:115567767..115567784,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11254 | |EntrezGene=11254 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11047 | |HGNC=11047 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc004eqi.2,uc011mtm.1_5end | |association_with_transcript=0bp_to_uc004eqi.2,uc011mtm.1_5end | ||
|cluster_id=chrX:115567767..115567784,+ | |||
|description=CAGE_peak_1_at_SLC6A14_5end | |description=CAGE_peak_1_at_SLC6A14_5end | ||
|id=chrX:115567767..115567784,+ | |id=chrX:115567767..115567784,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.57e-26!43;CL:0000223!2.58e-23!59;CL:0000066!7.29e-15!254;CL:0002368!7.56e-15!13;CL:0002251!1.01e-12!21;CL:0002202!8.80e-09!9;CL:0002632!8.80e-09!9;CL:0000244!2.32e-07!4;CL:0000731!2.32e-07!4 | |ontology_enrichment_celltype=CL:0002076!2.57e-26!43;CL:0000223!2.58e-23!59;CL:0000066!7.29e-15!254;CL:0002368!7.56e-15!13;CL:0002251!1.01e-12!21;CL:0002202!8.80e-09!9;CL:0002632!8.80e-09!9;CL:0000244!2.32e-07!4;CL:0000731!2.32e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.19e-22;42!CL:0002368;4.12e-21;13!CL:0002202;2.47e-12;9!CL:0002632;2.47e-12;9!CL:0002251;1.91e-10;20!CL:0000244;7.35e-10;4!CL:0000731;7.35e-10;4!CL:0002623;3.30e-08;3!CL:0002231;3.88e-08;3!CL:0002328;5.75e-08;3!CL:0000307;6.42e-08;3!CL:0002621;8.58e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.89e-30,42;CL:0000223,1.76e-26,58;CL:0002368,3.93e-21,13;CL:0000066,1.32e-12,253;CL:0002202,2.49e-12,9;CL:0002632,2.49e-12,9;CL:0002251,1.64e-10,20;CL:0000244,6.14e-10,4;CL:0000731,6.14e-10,4;CL:0002623,3.06e-08,3;CL:0002231,3.83e-08,3;CL:0000068,5.82e-08,3;CL:0000069,5.82e-08,3;CL:0000307,5.82e-08,3;CL:0000377,5.82e-08,3;CL:0002328,6.27e-08,3;CL:0002621,7.61e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.42e-13;58!CL:0000377;6.42e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.68e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:299;2.37e-08;25!DOID:5093;3.87e-07;4!DOID:1612;3.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:299,2.47e-08,25;DOID:5093,3.87e-07,4;DOID:1612,3.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.80e-29!169;UBERON:0000925!4.80e-29!169;UBERON:0006595!4.80e-29!169;UBERON:0001007!2.02e-22!155;UBERON:0001555!2.02e-22!155;UBERON:0007026!2.02e-22!155;UBERON:0004921!1.31e-18!129;UBERON:0004185!1.31e-18!129;UBERON:0001004!4.74e-18!72;UBERON:0000161!7.18e-18!35;UBERON:0000077!1.16e-17!130;UBERON:0000166!9.42e-14!21;UBERON:0005911!3.62e-13!82;UBERON:0001041!3.77e-12!98;UBERON:0001044!2.92e-11!6;UBERON:0003293!2.92e-11!6;UBERON:0003294!2.92e-11!6;UBERON:0010047!2.92e-11!6;UBERON:0000167!2.92e-11!6;UBERON:0000165!1.18e-10!28;UBERON:0000930!1.18e-10!28;UBERON:0000065!1.94e-09!53;UBERON:0005178!2.33e-09!34;UBERON:0002224!2.33e-09!34;UBERON:0000466!4.93e-09!126;UBERON:0005181!5.73e-09!35;UBERON:0007196!5.75e-09!14;UBERON:0001558!5.75e-09!14;UBERON:0000915!1.95e-08!52;UBERON:0000365!2.41e-08!5;UBERON:0000464!5.13e-08!104;UBERON:0003104!6.66e-08!238;UBERON:0009142!6.66e-08!238;UBERON:0002294!1.17e-07!7;UBERON:0001173!1.17e-07!7;UBERON:0004912!1.17e-07!7;UBERON:0003102!2.00e-07!95;UBERON:0000481!3.37e-07!347;UBERON:0005910!7.22e-07!6;UBERON:0000078!8.93e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;3.72e-16;14!UBERON:0001044;1.52e-15;6!UBERON:0003293;1.52e-15;6!UBERON:0003294;1.52e-15;6!UBERON:0010047;1.52e-15;6!UBERON:0003408;1.52e-15;6!UBERON:0000167;1.52e-15;6!UBERON:0000161;8.96e-14;19!UBERON:0000166;8.96e-14;19!UBERON:0000165;2.30e-12;28!UBERON:0007196;5.63e-12;15!UBERON:0001558;5.63e-12;15!UBERON:0001004;1.46e-10;65!UBERON:0005178;2.30e-10;34!UBERON:0002224;2.30e-10;34!UBERON:0003126;3.77e-09;7!UBERON:0001005;3.77e-09;7!UBERON:0005181;4.05e-09;35!UBERON:0000065;4.39e-09;44!UBERON:0004921;6.44e-09;33!UBERON:0000486;7.12e-09;12!UBERON:0004815;5.75e-08;3!UBERON:0002031;5.75e-08;3!UBERON:0000365;6.87e-08;5!UBERON:0001949;8.58e-08;3!UBERON:0002110;1.10e-07;3!UBERON:0000915;5.50e-07;52!UBERON:0001555;5.68e-07;54!UBERON:0003127;9.41e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.35e-30,160;UBERON:0000925,4.35e-30,160;UBERON:0006595,4.35e-30,160;UBERON:0001004,8.94e-25,74;UBERON:0001007,1.23e-22,145;UBERON:0001555,1.23e-22,145;UBERON:0007026,1.23e-22,145;UBERON:0004921,5.60e-19,118;UBERON:0001041,3.49e-18,87;UBERON:0000166,1.30e-16,22;UBERON:0000161,7.75e-16,36;UBERON:0001044,1.47e-15,6;UBERON:0003293,1.47e-15,6;UBERON:0003294,1.47e-15,6;UBERON:0010047,1.47e-15,6;UBERON:0000167,1.47e-15,6;UBERON:0000065,1.04e-13,54;UBERON:0005911,2.51e-13,82;UBERON:0007196,5.68e-12,15;UBERON:0001558,5.68e-12,15;UBERON:0000165,7.94e-12,29;UBERON:0000930,7.94e-12,29;UBERON:0005178,3.06e-11,34;UBERON:0002224,3.06e-11,34;UBERON:0005181,8.02e-11,35;UBERON:0000915,4.84e-10,52;UBERON:0000153,1.25e-09,62;UBERON:0007811,1.25e-09,62;UBERON:0003126,3.52e-09,7;UBERON:0001005,3.52e-09,7;UBERON:0003408,5.29e-09,10;UBERON:0000033,1.11e-08,56;UBERON:0008947,2.29e-08,38;UBERON:0003258,2.29e-08,38;UBERON:0000365,5.97e-08,5;UBERON:0004815,6.27e-08,3;UBERON:0002031,6.27e-08,3;UBERON:0011216,7.01e-08,223;UBERON:0001949,7.61e-08,3;UBERON:0009569,1.19e-07,112;UBERON:0002110,1.56e-07,3;UBERON:0006242,1.56e-07,3;UBERON:0002530,2.58e-07,59;UBERON:0001444,7.16e-07,49;UBERON:0003127,9.41e-07,2 | |||
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| ||
|short_description=p1@SLC6A14 | |short_description=p1@SLC6A14 | ||
}} | }} |
Latest revision as of 03:30, 19 September 2015
Short description: | p1@SLC6A14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC6A14_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc004eqi.2, uc011mtm.1_5end |
EntrezGene: | SLC6A14 |
HGNC: | 11047 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.89e-30 | 42 |
endodermal cell | 1.76e-26 | 58 |
respiratory epithelial cell | 3.93e-21 | 13 |
epithelial cell | 1.32e-12 | 253 |
epithelial cell of tracheobronchial tree | 2.49e-12 | 9 |
epithelial cell of lower respiratory tract | 2.49e-12 | 9 |
epithelial cell of alimentary canal | 1.64e-10 | 20 |
transitional epithelial cell | 6.14e-10 | 4 |
urothelial cell | 6.14e-10 | 4 |
acinar cell of salivary gland | 3.06e-08 | 3 |
epithelial cell of prostate | 3.83e-08 | 3 |
duct epithelial cell | 5.82e-08 | 3 |
branched duct epithelial cell | 5.82e-08 | 3 |
tracheal epithelial cell | 5.82e-08 | 3 |
tracheoblast | 5.82e-08 | 3 |
bronchial epithelial cell | 6.27e-08 | 3 |
gingival epithelial cell | 7.61e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.47e-08 | 25 |
thoracic cancer | 3.87e-07 | 4 |
breast cancer | 3.87e-07 | 4 |