FFCP PHASE1:Hg19::chr19:6464502..6464583,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92359 | |EntrezGene=92359 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20237 | |HGNC=20237 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BUF7 | |UniProt=Q9BUF7 | ||
|association_with_transcript=-96bp_to_BC002652_5end | |association_with_transcript=-96bp_to_BC002652_5end | ||
|cluster_id=chr19:6464502..6464583,+ | |||
|description=CAGE_peak_2_at_CRB3_5end | |description=CAGE_peak_2_at_CRB3_5end | ||
|id=chr19:6464502..6464583,+ | |id=chr19:6464502..6464583,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.19e-26!254;CL:0000223!2.07e-15!59;CL:1000497!1.37e-14!18;CL:0002518!1.37e-14!18;CL:1000507!1.86e-12!12;CL:1000494!1.86e-12!12;CL:1000449!1.91e-12!16;CL:0002076!1.46e-09!43;CL:0002681!1.25e-08!13;CL:0002584!1.25e-08!13;CL:0000181!1.94e-07!12;CL:0000417!1.94e-07!12;CL:0000668!1.94e-07!12;CL:0000414!1.94e-07!12;CL:0000412!1.94e-07!12;CL:0000182!1.94e-07!12 | |ontology_enrichment_celltype=CL:0000066!1.19e-26!254;CL:0000223!2.07e-15!59;CL:1000497!1.37e-14!18;CL:0002518!1.37e-14!18;CL:1000507!1.86e-12!12;CL:1000494!1.86e-12!12;CL:1000449!1.91e-12!16;CL:0002076!1.46e-09!43;CL:0002681!1.25e-08!13;CL:0002584!1.25e-08!13;CL:0000181!1.94e-07!12;CL:0000417!1.94e-07!12;CL:0000668!1.94e-07!12;CL:0000414!1.94e-07!12;CL:0000412!1.94e-07!12;CL:0000182!1.94e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.70e-29;10!CL:1000494;1.70e-29;10!CL:1000497;8.42e-24;17!CL:0002518;8.42e-24;17!CL:1000449;5.00e-23;15!CL:0002681;2.50e-15;12!CL:0002584;2.50e-15;12!CL:0000182;1.43e-11;12!CL:0000239;6.96e-10;3!CL:1000615;6.96e-10;3!CL:0002306;6.96e-10;3!CL:0002586;9.14e-09;3!CL:0000650;2.39e-07;2!CL:1000500;2.39e-07;2!CL:1000618;2.39e-07;2!CL:1001318;2.39e-07;2!CL:0002173;2.39e-07;2 | |ontology_enrichment_celltype_v019=CL:1000507;1.70e-29;10!CL:1000494;1.70e-29;10!CL:1000497;8.42e-24;17!CL:0002518;8.42e-24;17!CL:1000449;5.00e-23;15!CL:0002681;2.50e-15;12!CL:0002584;2.50e-15;12!CL:0000182;1.43e-11;12!CL:0000239;6.96e-10;3!CL:1000615;6.96e-10;3!CL:0002306;6.96e-10;3!CL:0002586;9.14e-09;3!CL:0000650;2.39e-07;2!CL:1000500;2.39e-07;2!CL:1000618;2.39e-07;2!CL:1001318;2.39e-07;2!CL:0002173;2.39e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.58e-29,10;CL:1000494,1.58e-29,10;CL:1000497,8.26e-24,17;CL:0002518,8.26e-24,17;CL:1000449,4.75e-23,15;CL:0002681,2.50e-15,12;CL:0002584,2.50e-15,12;CL:0000066,4.93e-12,253;CL:0000182,1.30e-11,12;CL:0000239,6.87e-10,3;CL:1000615,6.87e-10,3;CL:0002306,6.87e-10,3;CL:0002586,1.02e-08,3;CL:0000650,2.46e-07,2;CL:1000500,2.46e-07,2;CL:1000618,2.46e-07,2;CL:1001318,2.46e-07,2;CL:0002173,2.46e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.74e-13;13!UBERON:0003104;1.95e-13;31!UBERON:0004161;1.02e-12;11!UBERON:0006595;1.02e-07;86 | |ontology_enrichment_development_v019=UBERON:0009497;1.74e-13;13!UBERON:0003104;1.95e-13;31!UBERON:0004161;1.02e-12;11!UBERON:0006595;1.02e-07;86 | ||
|ontology_enrichment_disease=DOID:305!2.41e-24!106;DOID:0050687!4.52e-16!143;DOID:299!9.12e-11!25 | |ontology_enrichment_disease=DOID:305!2.41e-24!106;DOID:0050687!4.52e-16!143;DOID:299!9.12e-11!25 | ||
|ontology_enrichment_disease_v019=DOID:299;9.86e-08;25!DOID:3493;7.92e-07;2 | |ontology_enrichment_disease_v019=DOID:299;9.86e-08;25!DOID:3493;7.92e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:305,3.30e-09,106;DOID:299,8.19e-08,25;DOID:3493,6.64e-07,2;DOID:4468,9.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.18e-24!129;UBERON:0004185!2.18e-24!129;UBERON:0001007!3.92e-24!155;UBERON:0001555!3.92e-24!155;UBERON:0007026!3.92e-24!155;UBERON:0004119!1.16e-23!169;UBERON:0000925!1.16e-23!169;UBERON:0006595!1.16e-23!169;UBERON:0005172!5.02e-20!55;UBERON:0005173!5.02e-20!55;UBERON:0000077!1.04e-17!130;UBERON:0002417!5.56e-17!61;UBERON:0000916!5.56e-17!61;UBERON:0005177!5.60e-17!107;UBERON:0000466!9.12e-16!126;UBERON:0006554!1.97e-15!44;UBERON:0003104!2.97e-15!238;UBERON:0009142!2.97e-15!238;UBERON:0000058!5.06e-15!26;UBERON:0001008!6.64e-15!45;UBERON:0002113!9.67e-15!27;UBERON:0003918!9.67e-15!27;UBERON:0005095!9.67e-15!27;UBERON:0007687!9.67e-15!27;UBERON:0000080!1.10e-14!18;UBERON:0002120!1.10e-14!18;UBERON:0004875!1.10e-14!18;UBERON:0005721!1.10e-14!18;UBERON:0005754!1.10e-14!18;UBERON:0007297!1.10e-14!18;UBERON:0001041!2.24e-14!98;UBERON:0000481!3.57e-14!347;UBERON:0006555!1.47e-13!17;UBERON:0005103!1.47e-13!17;UBERON:0000083!1.47e-13!17;UBERON:0009201!1.47e-13!17;UBERON:0004819!1.47e-13!17;UBERON:0006553!1.47e-13!17;UBERON:0003074!1.47e-13!17;UBERON:0003060!1.47e-13!17;UBERON:0003064!4.24e-13!37;UBERON:0005911!4.62e-13!82;UBERON:0009569!7.64e-13!113;UBERON:0004876!9.28e-13!20;UBERON:0000489!1.10e-12!32;UBERON:0003929!1.42e-12!54;UBERON:0009773!1.86e-12!12;UBERON:0001231!1.86e-12!12;UBERON:0004810!1.86e-12!12;UBERON:0004211!1.91e-12!16;UBERON:0001285!1.91e-12!16;UBERON:0007684!1.91e-12!16;UBERON:0003220!1.91e-12!16;UBERON:0004208!1.91e-12!16;UBERON:0003887!6.15e-12!21;UBERON:0009497!1.01e-11!25;UBERON:0000015!1.01e-11!25;UBERON:0002423!1.01e-11!25;UBERON:0006235!1.01e-11!25;UBERON:0004161!1.01e-11!25;UBERON:0000062!1.11e-11!511;UBERON:0009854!1.76e-11!23;UBERON:0001737!2.37e-11!9;UBERON:0009856!3.76e-11!26;UBERON:0008835!1.87e-10!22;UBERON:0003894!1.87e-10!22;UBERON:0007499!3.59e-10!25;UBERON:0001048!4.40e-09!168;UBERON:0005409!5.63e-09!35;UBERON:0003886!8.76e-09!63;UBERON:0000464!1.06e-08!104;UBERON:0001225!1.25e-08!13;UBERON:0008987!1.25e-08!13;UBERON:0000160!1.50e-08!27;UBERON:0000922!2.66e-08!612;UBERON:0000065!4.64e-08!53;UBERON:0001851!7.33e-08!16;UBERON:0002107!8.18e-08!19;UBERON:0006925!8.18e-08!19;UBERON:0008836!8.18e-08!19;UBERON:0001557!1.10e-07!19;UBERON:0005156!1.31e-07!59;UBERON:0000990!1.31e-07!59;UBERON:0008947!1.80e-07!38;UBERON:0003258!1.80e-07!38;UBERON:0002100!2.19e-07!216;UBERON:0002553!3.44e-07!70;UBERON:0002050!4.63e-07!605;UBERON:0005423!4.63e-07!605;UBERON:0003101!7.00e-07!22;UBERON:0000079!7.00e-07!22;UBERON:0002530!8.72e-07!59;UBERON:0000923!9.74e-07!604;UBERON:0005291!9.74e-07!604;UBERON:0006598!9.74e-07!604;UBERON:0002532!9.74e-07!604 | |ontology_enrichment_uberon=UBERON:0004921!2.18e-24!129;UBERON:0004185!2.18e-24!129;UBERON:0001007!3.92e-24!155;UBERON:0001555!3.92e-24!155;UBERON:0007026!3.92e-24!155;UBERON:0004119!1.16e-23!169;UBERON:0000925!1.16e-23!169;UBERON:0006595!1.16e-23!169;UBERON:0005172!5.02e-20!55;UBERON:0005173!5.02e-20!55;UBERON:0000077!1.04e-17!130;UBERON:0002417!5.56e-17!61;UBERON:0000916!5.56e-17!61;UBERON:0005177!5.60e-17!107;UBERON:0000466!9.12e-16!126;UBERON:0006554!1.97e-15!44;UBERON:0003104!2.97e-15!238;UBERON:0009142!2.97e-15!238;UBERON:0000058!5.06e-15!26;UBERON:0001008!6.64e-15!45;UBERON:0002113!9.67e-15!27;UBERON:0003918!9.67e-15!27;UBERON:0005095!9.67e-15!27;UBERON:0007687!9.67e-15!27;UBERON:0000080!1.10e-14!18;UBERON:0002120!1.10e-14!18;UBERON:0004875!1.10e-14!18;UBERON:0005721!1.10e-14!18;UBERON:0005754!1.10e-14!18;UBERON:0007297!1.10e-14!18;UBERON:0001041!2.24e-14!98;UBERON:0000481!3.57e-14!347;UBERON:0006555!1.47e-13!17;UBERON:0005103!1.47e-13!17;UBERON:0000083!1.47e-13!17;UBERON:0009201!1.47e-13!17;UBERON:0004819!1.47e-13!17;UBERON:0006553!1.47e-13!17;UBERON:0003074!1.47e-13!17;UBERON:0003060!1.47e-13!17;UBERON:0003064!4.24e-13!37;UBERON:0005911!4.62e-13!82;UBERON:0009569!7.64e-13!113;UBERON:0004876!9.28e-13!20;UBERON:0000489!1.10e-12!32;UBERON:0003929!1.42e-12!54;UBERON:0009773!1.86e-12!12;UBERON:0001231!1.86e-12!12;UBERON:0004810!1.86e-12!12;UBERON:0004211!1.91e-12!16;UBERON:0001285!1.91e-12!16;UBERON:0007684!1.91e-12!16;UBERON:0003220!1.91e-12!16;UBERON:0004208!1.91e-12!16;UBERON:0003887!6.15e-12!21;UBERON:0009497!1.01e-11!25;UBERON:0000015!1.01e-11!25;UBERON:0002423!1.01e-11!25;UBERON:0006235!1.01e-11!25;UBERON:0004161!1.01e-11!25;UBERON:0000062!1.11e-11!511;UBERON:0009854!1.76e-11!23;UBERON:0001737!2.37e-11!9;UBERON:0009856!3.76e-11!26;UBERON:0008835!1.87e-10!22;UBERON:0003894!1.87e-10!22;UBERON:0007499!3.59e-10!25;UBERON:0001048!4.40e-09!168;UBERON:0005409!5.63e-09!35;UBERON:0003886!8.76e-09!63;UBERON:0000464!1.06e-08!104;UBERON:0001225!1.25e-08!13;UBERON:0008987!1.25e-08!13;UBERON:0000160!1.50e-08!27;UBERON:0000922!2.66e-08!612;UBERON:0000065!4.64e-08!53;UBERON:0001851!7.33e-08!16;UBERON:0002107!8.18e-08!19;UBERON:0006925!8.18e-08!19;UBERON:0008836!8.18e-08!19;UBERON:0001557!1.10e-07!19;UBERON:0005156!1.31e-07!59;UBERON:0000990!1.31e-07!59;UBERON:0008947!1.80e-07!38;UBERON:0003258!1.80e-07!38;UBERON:0002100!2.19e-07!216;UBERON:0002553!3.44e-07!70;UBERON:0002050!4.63e-07!605;UBERON:0005423!4.63e-07!605;UBERON:0003101!7.00e-07!22;UBERON:0000079!7.00e-07!22;UBERON:0002530!8.72e-07!59;UBERON:0000923!9.74e-07!604;UBERON:0005291!9.74e-07!604;UBERON:0006598!9.74e-07!604;UBERON:0002532!9.74e-07!604 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| ||
|short_description=p2@CRB3 | |short_description=p2@CRB3 | ||
}} | }} |
Latest revision as of 16:19, 24 September 2015
Short description: | p2@CRB3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRB3_5end |
Coexpression cluster: | NA |
Association with transcript: | -96bp_to_BC002652_5end |
EntrezGene: | CRB3 |
HGNC: | 20237 |
UniProt: | Q9BUF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.58e-29 | 10 |
nephron tubule epithelial cell | 1.58e-29 | 10 |
kidney cell | 8.26e-24 | 17 |
kidney epithelial cell | 8.26e-24 | 17 |
epithelial cell of nephron | 4.75e-23 | 15 |
kidney cortical cell | 2.50e-15 | 12 |
renal cortical epithelial cell | 2.50e-15 | 12 |
epithelial cell | 4.93e-12 | 253 |
hepatocyte | 1.30e-11 | 12 |
brush border epithelial cell | 6.87e-10 | 3 |
kidney cortex tubule cell | 6.87e-10 | 3 |
epithelial cell of proximal tubule | 6.87e-10 | 3 |
retinal pigment epithelial cell | 1.02e-08 | 3 |
mesangial cell | 2.46e-07 | 2 |
kidney interstitial cell | 2.46e-07 | 2 |
juxtaglomerular complex cell | 2.46e-07 | 2 |
renal interstitial pericyte | 2.46e-07 | 2 |
extraglomerular mesangial cell | 2.46e-07 | 2 |
Ontology term | p-value | n |
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