FFCP PHASE1:Hg19::chr11:61717845..61717856,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:61717845..61717856,+
|short_description=p6@BEST1
|description=CAGE_peak_6_at_BEST1_5end
|association_with_transcript=3bp_to_ENST00000449131_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7439 | |EntrezGene=7439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12703 | |HGNC=12703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000449131_5end | |||
|cluster_id=chr11:61717845..61717856,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_6_at_BEST1_5end | |||
|id=chr11:61717845..61717856,+ | |||
|ontology_enrichment_celltype=CL:0000147!1.58e-17!14;CL:0000149!1.57e-13!4;CL:0000148!2.16e-11!10;CL:0000541!2.16e-11!10;CL:0002586!1.59e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.05e-17;14!CL:0000148;5.12e-13;10!CL:0000149;1.27e-12;4!CL:0002567;3.67e-08;3!CL:0002586;3.67e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.10e-17,14;CL:0000148,5.82e-13,10;CL:0000541,5.82e-13,10;CL:0000149,1.13e-12,4;CL:0002586,3.31e-08,3;CL:0002567,3.55e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.33e-16;3!UBERON:0003057;1.33e-16;3!UBERON:0006601;2.62e-16;82!UBERON:0003056;2.04e-08;3!UBERON:0005425;6.77e-07;1 | |||
|ontology_enrichment_disease=DOID:1909!4.60e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;7.92e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.45e-12,2 | |||
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|short_description=p6@BEST1 | |||
}} | }} |
Latest revision as of 17:39, 18 September 2015
Short description: | p6@BEST1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BEST1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 3bp_to_ENST00000449131_5end |
EntrezGene: | BEST1 |
HGNC: | 12703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.10e-17 | 14 |
melanocyte | 5.82e-13 | 10 |
melanoblast | 5.82e-13 | 10 |
visual pigment cell | 1.13e-12 | 4 |
retinal pigment epithelial cell | 3.31e-08 | 3 |
light melanocyte | 3.55e-08 | 3 |
Ontology term | p-value | n |
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