FFCP PHASE1:Hg19::chr12:52885340..52885349,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:52885340..52885349,-
|short_description=p10@KRT6A
|description=CAGE_peak_10_at_KRT6A_5end
|association_with_transcript=59bp_to_ENST00000549754_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3853 | |EntrezGene=3853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6443 | |HGNC=6443 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000549754_5end | |||
|cluster_id=chr12:52885340..52885349,- | |||
|coexpression_cluster_id=C594 | |||
|description=CAGE_peak_10_at_KRT6A_5end | |||
|id=chr12:52885340..52885349,- | |||
|ontology_enrichment_celltype=CL:0002076!6.08e-26!43;CL:0002368!1.01e-21!13;CL:0002159!1.78e-21!13;CL:0000223!1.35e-17!59;CL:0000066!2.24e-13!254;CL:0002328!1.55e-12!3;CL:0002077!3.94e-11!33;CL:0002621!4.44e-11!3;CL:0002166!4.77e-11!3;CL:0002202!1.42e-10!9;CL:0002632!1.42e-10!9;CL:0000240!5.70e-10!6;CL:0000311!5.70e-10!6;CL:0000079!5.70e-10!6;CL:0000237!5.70e-10!6;CL:0000036!5.70e-10!6;CL:0000357!5.70e-10!6;CL:0000114!5.70e-10!6;CL:0002251!1.52e-09!21;CL:0000575!9.57e-09!2;CL:0000362!9.59e-08!8;CL:0002536!1.01e-07!2;CL:0000622!2.37e-07!5;CL:0000312!2.93e-07!5 | |||
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|ontology_enrichment_development_v019=CL:0000357;7.10e-10;6!CL:0000114;7.10e-10;6!CL:0000377;2.28e-09;3!CL:0000223;6.50e-09;58!UBERON:0009143;1.91e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.91e-07;1!DOID:3149;1.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.17e-07,1;DOID:3149,3.17e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004815;3.81e-20;3!UBERON:0002031;3.81e-20;3!UBERON:0002185;2.64e-12;5!UBERON:0007196;1.54e-10;15!UBERON:0001558;1.54e-10;15!UBERON:0001723;1.73e-09;3!UBERON:0001033;1.73e-09;3!UBERON:0001043;2.28e-09;3!UBERON:0000485;6.36e-09;7!UBERON:0005178;2.09e-08;34!UBERON:0002224;2.09e-08;34!UBERON:0005181;6.60e-08;35!UBERON:0005795;1.91e-07;1!UBERON:0000964;2.76e-07;4!UBERON:0010409;2.76e-07;4!UBERON:0001041;2.87e-07;14!UBERON:0001987;3.60e-07;4!UBERON:0001003;6.66e-07;15!UBERON:0007376;6.66e-07;15 | |||
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| ||
|short_description=p10@KRT6A | |||
}} | }} |
Latest revision as of 22:50, 18 September 2015
Short description: | p10@KRT6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_KRT6A_5end |
Coexpression cluster: | C594_Keratinocyte_Placental_amniotic_Esophageal_tongue_Corneal_Prostate |
Association with transcript: | 59bp_to_ENST00000549754_5end |
EntrezGene: | KRT6A |
HGNC: | 6443 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.28e-20 | 3 |
epithelium of bronchus | 2.28e-20 | 3 |
bronchus | 1.95e-12 | 5 |
extraembryonic membrane | 3.23e-11 | 14 |
membranous layer | 3.23e-11 | 14 |
surface structure | 4.47e-11 | 99 |
tracheobronchial tree | 1.44e-10 | 15 |
lower respiratory tract | 1.44e-10 | 15 |
tongue | 2.23e-09 | 3 |
gustatory system | 2.23e-09 | 3 |
future tongue | 2.23e-09 | 3 |
esophagus | 2.33e-09 | 3 |
esophageal region | 2.33e-09 | 3 |
endoderm-derived structure | 5.53e-09 | 160 |
endoderm | 5.53e-09 | 160 |
presumptive endoderm | 5.53e-09 | 160 |
chorion | 1.14e-08 | 7 |
thoracic cavity element | 2.29e-08 | 34 |
thoracic cavity | 2.29e-08 | 34 |
respiratory system | 2.93e-08 | 74 |
thoracic segment organ | 4.21e-08 | 35 |
epithelial fold | 1.18e-07 | 47 |
orifice | 1.23e-07 | 36 |
cornea | 2.32e-07 | 4 |
eye surface | 2.32e-07 | 4 |
optic eminence | 2.32e-07 | 4 |
corneal primordium | 2.32e-07 | 4 |
placenta | 3.28e-07 | 4 |
allantois | 3.28e-07 | 4 |
simple columnar epithelium | 4.19e-07 | 9 |
skin epidermis | 6.88e-07 | 15 |
outer epithelium | 6.88e-07 | 15 |
enveloping layer of ectoderm | 6.88e-07 | 15 |
oral opening | 8.03e-07 | 22 |
foregut | 9.04e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.17e-07 | 1 |
keratoacanthoma | 3.17e-07 | 1 |