FFCP PHASE1:Hg19::chr16:3068178..3068191,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:3068178..3068191,-
|short_description=p1@CLDN6
|description=CAGE_peak_1_at_CLDN6_5end
|association_with_transcript=0bp_to_ENST00000328796,NM_021195,uc002c...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9074 | |EntrezGene=9074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2048 | |HGNC=2048 | ||
|TSSclassifier=strong | |||
|UniProt=P56747 | |UniProt=P56747 | ||
|association_with_transcript=0bp_to_ENST00000328796,NM_021195,uc002csu.3_5end | |||
|cluster_id=chr16:3068178..3068191,- | |||
|coexpression_cluster_id=C1028 | |||
|description=CAGE_peak_1_at_CLDN6_5end | |||
|id=chr16:3068178..3068191,- | |||
|ontology_enrichment_celltype=CL:1000449!3.38e-19!16;CL:1000497!1.70e-16!18;CL:0002518!1.70e-16!18;CL:0002681!5.81e-15!13;CL:0002584!5.81e-15!13;CL:1000507!1.31e-14!12;CL:1000494!1.31e-14!12;CL:0000066!4.57e-12!254;CL:0000039!3.84e-11!7;CL:0000586!3.84e-11!7;CL:1000612!8.35e-10!7;CL:1000746!8.35e-10!7;CL:0000540!9.41e-09!6;CL:0000031!9.41e-09!6;CL:0000404!9.41e-09!6;CL:0002322!9.85e-09!5;CL:0002319!2.28e-08!25;CL:0000047!4.26e-08!8;CL:0000128!4.21e-07!7;CL:0000126!4.21e-07!7;CL:0000127!4.21e-07!7;CL:0002453!4.21e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.87e-31;15!CL:1000497;5.09e-27;17!CL:0002518;5.09e-27;17!CL:1000507;2.25e-25;10!CL:1000494;2.25e-25;10!CL:0002681;9.51e-24;12!CL:0002584;9.51e-24;12!CL:0000039;3.67e-18;7!CL:0000586;3.67e-18;7!CL:0002322;5.40e-14;5!CL:1000746;2.73e-12;7!CL:1000612;2.73e-12;7!CL:0002319;3.16e-12;25!CL:0000128;1.90e-11;7!CL:0000126;1.90e-11;7!CL:0000127;1.90e-11;7!CL:0000540;9.81e-11;6!CL:0000404;9.81e-11;6!CL:0000075;4.63e-09;27!CL:0000239;2.06e-08;3!CL:1000615;2.06e-08;3!CL:0002306;2.06e-08;3!CL:0002577;4.44e-08;3!CL:0002188;5.89e-08;5!CL:0002605;7.41e-08;3!CL:0000064;9.08e-08;3!CL:0000067;9.08e-08;3!CL:0005012;9.08e-08;3!CL:0002304;9.08e-08;3!CL:0000147;9.77e-08;14!CL:0002586;1.57e-07;3!CL:0002541;2.15e-07;3!CL:0002603;2.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,4.78e-31,15;CL:1000497,6.11e-27,17;CL:0002518,6.11e-27,17;CL:1000507,2.28e-25,10;CL:1000494,2.28e-25,10;CL:0002681,1.16e-23,12;CL:0002584,1.16e-23,12;CL:0000039,3.67e-18,7;CL:0000586,3.67e-18,7;CL:0002322,5.47e-14,5;CL:0000066,1.31e-12,253;CL:0002319,2.98e-12,25;CL:1000746,3.25e-12,7;CL:1000612,3.25e-12,7;CL:0000128,1.69e-11,7;CL:0000126,1.69e-11,7;CL:0000127,1.69e-11,7;CL:0002453,1.69e-11,7;CL:0000540,9.81e-11,6;CL:0000031,9.81e-11,6;CL:0000404,9.81e-11,6;CL:0000133,1.07e-09,59;CL:0000075,4.59e-09,27;CL:0000239,2.09e-08,3;CL:1000615,2.09e-08,3;CL:0002306,2.09e-08,3;CL:0002577,4.39e-08,3;CL:0000047,6.15e-08,8;CL:0002188,6.91e-08,5;CL:0002605,7.50e-08,3;CL:0000064,9.09e-08,3;CL:0000067,9.09e-08,3;CL:0005012,9.09e-08,3;CL:0002304,9.09e-08,3;CL:0000147,9.51e-08,14;CL:0002586,1.61e-07,3;CL:0002541,2.23e-07,3;CL:0002603,2.39e-07,3;CL:0000221,3.36e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;9.81e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;3.66e-10;22!DOID:2994;3.66e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.66e-10,22;DOID:2994,3.66e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0004211!3.38e-19!16;UBERON:0001285!3.38e-19!16;UBERON:0007684!3.38e-19!16;UBERON:0003220!3.38e-19!16;UBERON:0004208!3.38e-19!16;UBERON:0006555!9.13e-18!17;UBERON:0005103!9.13e-18!17;UBERON:0000083!9.13e-18!17;UBERON:0009201!9.13e-18!17;UBERON:0004819!9.13e-18!17;UBERON:0006553!9.13e-18!17;UBERON:0003074!9.13e-18!17;UBERON:0003060!9.13e-18!17;UBERON:0000080!1.70e-16!18;UBERON:0002120!1.70e-16!18;UBERON:0004875!1.70e-16!18;UBERON:0005721!1.70e-16!18;UBERON:0005754!1.70e-16!18;UBERON:0007297!1.70e-16!18;UBERON:0001225!5.81e-15!13;UBERON:0008987!5.81e-15!13;UBERON:0009773!1.31e-14!12;UBERON:0001231!1.31e-14!12;UBERON:0004810!1.31e-14!12;UBERON:0004876!2.40e-14!20;UBERON:0002113!9.75e-14!27;UBERON:0003918!9.75e-14!27;UBERON:0005095!9.75e-14!27;UBERON:0007687!9.75e-14!27;UBERON:0003887!1.98e-13!21;UBERON:0000489!5.74e-12!32;UBERON:0000058!1.66e-11!26;UBERON:0001851!1.83e-11!16;UBERON:0007625!2.31e-11!11;UBERON:0006554!6.36e-11!44;UBERON:0005172!1.33e-10!55;UBERON:0005173!1.33e-10!55;UBERON:0000353!1.40e-10!17;UBERON:0001008!1.58e-10!45;UBERON:0000074!8.35e-10!7;UBERON:0001229!8.35e-10!7;UBERON:0001230!8.35e-10!7;UBERON:0005749!8.35e-10!7;UBERON:0004199!8.35e-10!7;UBERON:0004209!8.35e-10!7;UBERON:0004198!8.35e-10!7;UBERON:0003124!1.12e-09!7;UBERON:0003886!1.45e-09!63;UBERON:0002417!8.08e-09!61;UBERON:0000916!8.08e-09!61;UBERON:0000970!1.28e-08!20;UBERON:0005631!2.01e-08!14;UBERON:0000158!2.01e-08!14;UBERON:0003064!2.58e-08!37;UBERON:0000020!4.11e-08!23;UBERON:0002104!4.76e-08!21;UBERON:0000019!5.93e-08!19;UBERON:0000047!5.93e-08!19;UBERON:0004088!5.93e-08!19;UBERON:0003072!5.93e-08!19;UBERON:0003071!5.93e-08!19;UBERON:0004128!5.93e-08!19;UBERON:0000466!6.29e-08!126;UBERON:0002553!7.63e-08!70;UBERON:0000064!1.20e-07!219;UBERON:0001032!1.26e-07!24;UBERON:0004456!1.26e-07!24;UBERON:0001456!6.60e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.87e-31;15!UBERON:0004819;3.87e-31;15!UBERON:0001285;3.87e-31;15!UBERON:0007684;3.87e-31;15!UBERON:0004211;2.25e-25;10!UBERON:0009773;2.25e-25;10!UBERON:0001231;2.25e-25;10!UBERON:0004810;2.25e-25;10!UBERON:0001225;9.51e-24;12!UBERON:0008987;9.51e-24;12!UBERON:0002113;1.69e-23;24!UBERON:0011143;1.69e-23;24!UBERON:0000489;1.09e-18;29!UBERON:0001851;1.84e-18;15!UBERON:0000353;1.84e-18;15!UBERON:0006554;6.42e-18;30!UBERON:0001008;6.42e-18;30!UBERON:0007625;1.04e-15;11!UBERON:0000074;2.73e-12;7!UBERON:0001229;2.73e-12;7!UBERON:0005172;6.71e-11;52!UBERON:0005173;6.71e-11;52!UBERON:0001987;6.22e-10;4!UBERON:0000488;1.51e-09;4!UBERON:0002417;3.42e-09;58!UBERON:0000916;3.42e-09;58!UBERON:0006853;2.06e-08;3!UBERON:0007685;2.06e-08;3!UBERON:0004134;2.06e-08;3!UBERON:0000019;2.27e-08;19!UBERON:0000047;2.27e-08;19!UBERON:0004088;2.27e-08;19!UBERON:0010230;2.27e-08;19!UBERON:0000970;7.21e-08;20!UBERON:0000478;8.46e-08;24!UBERON:0001778;9.08e-08;3!UBERON:0001775;9.08e-08;3!UBERON:0001781;1.57e-07;3!UBERON:0001782;1.57e-07;3!UBERON:0002104;2.04e-07;21!UBERON:0001456;2.04e-07;21!UBERON:0003124;2.15e-07;3!UBERON:0000920;2.15e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.78e-31,15;UBERON:0009773,4.78e-31,15;UBERON:0001231,4.78e-31,15;UBERON:0001285,4.78e-31,15;UBERON:0007684,4.78e-31,15;UBERON:0004208,4.78e-31,15;UBERON:0006555,7.26e-29,16;UBERON:0004819,7.26e-29,16;UBERON:0004810,2.28e-25,10;UBERON:0001225,1.16e-23,12;UBERON:0008987,1.16e-23,12;UBERON:0002113,2.62e-21,26;UBERON:0003918,2.62e-21,26;UBERON:0011143,2.62e-21,26;UBERON:0005095,2.62e-21,26;UBERON:0007687,2.62e-21,26;UBERON:0001851,2.16e-18,15;UBERON:0000353,2.16e-18,15;UBERON:0006554,4.98e-18,47;UBERON:0001008,1.56e-17,48;UBERON:0000489,3.62e-17,31;UBERON:0005172,2.02e-16,54;UBERON:0005173,2.02e-16,54;UBERON:0007625,9.68e-16,11;UBERON:0003124,1.28e-15,7;UBERON:0002417,3.47e-14,60;UBERON:0000916,3.47e-14,60;UBERON:0010532,3.25e-12,7;UBERON:0000074,3.25e-12,7;UBERON:0001229,3.25e-12,7;UBERON:0001230,3.25e-12,7;UBERON:0003220,3.25e-12,7;UBERON:0005749,3.25e-12,7;UBERON:0004199,3.25e-12,7;UBERON:0004209,3.25e-12,7;UBERON:0004198,3.25e-12,7;UBERON:0005631,7.24e-12,14;UBERON:0000158,7.24e-12,14;UBERON:0005103,1.36e-10,8;UBERON:0000083,1.36e-10,8;UBERON:0009201,1.36e-10,8;UBERON:0006553,1.36e-10,8;UBERON:0003074,1.36e-10,8;UBERON:0003060,1.36e-10,8;UBERON:0001987,6.37e-10,4;UBERON:0004340,6.37e-10,4;UBERON:0005177,1.20e-09,101;UBERON:0000488,1.39e-09,4;UBERON:0000080,2.49e-09,9;UBERON:0002120,2.49e-09,9;UBERON:0004875,2.49e-09,9;UBERON:0005721,2.49e-09,9;UBERON:0005754,2.49e-09,9;UBERON:0007297,2.49e-09,9;UBERON:0006853,2.09e-08,3;UBERON:0007685,2.09e-08,3;UBERON:0004134,2.09e-08,3;UBERON:0000019,6.94e-08,20;UBERON:0000047,6.94e-08,20;UBERON:0010312,6.94e-08,20;UBERON:0004088,6.94e-08,20;UBERON:0010230,6.94e-08,20;UBERON:0003072,6.94e-08,20;UBERON:0004128,6.94e-08,20;UBERON:0003071,6.94e-08,20;UBERON:0000478,8.53e-08,24;UBERON:0001778,9.09e-08,3;UBERON:0001775,9.09e-08,3;UBERON:0001782,1.61e-07,3;UBERON:0005424,1.61e-07,3;UBERON:0004876,1.70e-07,11;UBERON:0003103,1.82e-07,68;UBERON:0000970,1.97e-07,21;UBERON:0002104,1.97e-07,21;UBERON:0000920,2.23e-07,3;UBERON:0009569,3.08e-07,112;UBERON:0001456,5.08e-07,22;UBERON:0003887,8.25e-07,12 | |||
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| ||
|short_description=p1@CLDN6 | |||
}} | }} |
Latest revision as of 08:58, 16 September 2015
Short description: | p1@CLDN6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLDN6_5end |
Coexpression cluster: | C1028_Alveolar_Renal_iPS_teratocarcinoma_H9_HES3GFP_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000328796, NM_021195, uc002csu.3_5end |
EntrezGene: | CLDN6 |
HGNC: | 2048 |
UniProt: | P56747 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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