FFCP PHASE1:Hg19::chr17:36105074..36105086,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6928 | |EntrezGene=6928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11630 | |HGNC=11630 | ||
|TSSclassifier=strong | |||
|UniProt=P35680,Q6FHW6,E0YMJ6 | |UniProt=P35680,Q6FHW6,E0YMJ6 | ||
|association_with_transcript=9bp_to_NM_000458,NM_001165923,uc002hok.3,uc010wdi.1_5end | |association_with_transcript=9bp_to_NM_000458,NM_001165923,uc002hok.3,uc010wdi.1_5end | ||
|cluster_id=chr17:36105074..36105086,- | |||
|description=CAGE_peak_2_at_HNF1B_5end | |description=CAGE_peak_2_at_HNF1B_5end | ||
|id=chr17:36105074..36105086,- | |id=chr17:36105074..36105086,- | ||
|ontology_enrichment_celltype=CL:1000497!2.61e-19!18;CL:0002518!2.61e-19!18;CL:1000449!3.93e-16!16;CL:0000066!1.74e-14!254;CL:1000507!1.68e-13!12;CL:1000494!1.68e-13!12;CL:0002681!1.08e-11!13;CL:0002584!1.08e-11!13;CL:0000223!2.71e-08!59 | |ontology_enrichment_celltype=CL:1000497!2.61e-19!18;CL:0002518!2.61e-19!18;CL:1000449!3.93e-16!16;CL:0000066!1.74e-14!254;CL:1000507!1.68e-13!12;CL:1000494!1.68e-13!12;CL:0002681!1.08e-11!13;CL:0002584!1.08e-11!13;CL:0000223!2.71e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.15e-27;17!CL:0002518;1.15e-27;17!CL:1000507;9.88e-25;10!CL:1000494;9.88e-25;10!CL:1000449;8.94e-23;15!CL:0002681;5.67e-16;12!CL:0002584;5.67e-16;12!CL:0000239;9.19e-09;3!CL:1000615;9.19e-09;3!CL:0002306;9.19e-09;3!CL:0002231;1.15e-07;3!CL:0000182;6.23e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,8.46e-28,17;CL:0002518,8.46e-28,17;CL:1000507,7.23e-25,10;CL:1000494,7.23e-25,10;CL:1000449,6.73e-23,15;CL:0000066,1.26e-16,253;CL:0002681,4.56e-16,12;CL:0002584,4.56e-16,12;CL:0000223,2.69e-10,58;CL:0000239,8.63e-09,3;CL:1000615,8.63e-09,3;CL:0002306,8.63e-09,3;CL:0002231,1.58e-07,3;CL:0000182,7.45e-07,12;CL:0002076,7.65e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.50e-14;13!UBERON:0003104;9.79e-11;31!UBERON:0004161;6.06e-10;11!UBERON:0001041;2.55e-09;30!UBERON:0006595;4.38e-07;86 | |||
|ontology_enrichment_disease=DOID:305!7.40e-15!106;DOID:299!1.27e-11!25;DOID:0050687!7.63e-09!143 | |ontology_enrichment_disease=DOID:305!7.40e-15!106;DOID:299!1.27e-11!25;DOID:0050687!7.63e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:299;2.85e-12;25!DOID:4468;7.95e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.19e-13,106;DOID:299,2.68e-12,25;DOID:0050687,9.90e-09,143;DOID:4468,9.01e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0006554!3.82e-27!44;UBERON:0001008!2.56e-26!45;UBERON:0005172!2.09e-24!55;UBERON:0005173!2.09e-24!55;UBERON:0000058!1.10e-22!26;UBERON:0002113!3.97e-21!27;UBERON:0003918!3.97e-21!27;UBERON:0005095!3.97e-21!27;UBERON:0007687!3.97e-21!27;UBERON:0002417!5.88e-21!61;UBERON:0000916!5.88e-21!61;UBERON:0000080!5.92e-19!18;UBERON:0002120!5.92e-19!18;UBERON:0004875!5.92e-19!18;UBERON:0005721!5.92e-19!18;UBERON:0005754!5.92e-19!18;UBERON:0007297!5.92e-19!18;UBERON:0000489!1.32e-18!32;UBERON:0004119!1.99e-18!169;UBERON:0000925!1.99e-18!169;UBERON:0006595!1.99e-18!169;UBERON:0004921!4.80e-18!129;UBERON:0004185!4.80e-18!129;UBERON:0003887!1.25e-17!21;UBERON:0006555!1.43e-17!17;UBERON:0005103!1.43e-17!17;UBERON:0000083!1.43e-17!17;UBERON:0009201!1.43e-17!17;UBERON:0004819!1.43e-17!17;UBERON:0006553!1.43e-17!17;UBERON:0003074!1.43e-17!17;UBERON:0003060!1.43e-17!17;UBERON:0004876!1.36e-16!20;UBERON:0003064!1.83e-16!37;UBERON:0005177!2.29e-16!107;UBERON:0004211!3.93e-16!16;UBERON:0001285!3.93e-16!16;UBERON:0007684!3.93e-16!16;UBERON:0003220!3.93e-16!16;UBERON:0004208!3.93e-16!16;UBERON:0000466!3.08e-15!126;UBERON:0001007!5.30e-15!155;UBERON:0001555!5.30e-15!155;UBERON:0007026!5.30e-15!155;UBERON:0000077!8.02e-14!130;UBERON:0003104!1.12e-13!238;UBERON:0009142!1.12e-13!238;UBERON:0009773!1.68e-13!12;UBERON:0001231!1.68e-13!12;UBERON:0004810!1.68e-13!12;UBERON:0005911!1.48e-12!82;UBERON:0001737!1.79e-12!9;UBERON:0003886!2.25e-12!63;UBERON:0009569!4.10e-12!113;UBERON:0001225!1.08e-11!13;UBERON:0008987!1.08e-11!13;UBERON:0009497!1.33e-11!25;UBERON:0000015!1.33e-11!25;UBERON:0002423!1.33e-11!25;UBERON:0006235!1.33e-11!25;UBERON:0004161!1.33e-11!25;UBERON:0009856!6.81e-11!26;UBERON:0002553!2.34e-10!70;UBERON:0007499!4.33e-10!25;UBERON:0003929!5.38e-10!54;UBERON:0001041!1.40e-09!98;UBERON:0009854!1.73e-09!23;UBERON:0005409!2.80e-09!35;UBERON:0000464!4.25e-09!104;UBERON:0001851!5.04e-09!16;UBERON:0008835!1.08e-08!22;UBERON:0003894!1.08e-08!22;UBERON:0002294!1.67e-08!7;UBERON:0001173!1.67e-08!7;UBERON:0004912!1.67e-08!7;UBERON:0000353!2.39e-08!17;UBERON:0003101!9.08e-08!22;UBERON:0000079!9.08e-08!22;UBERON:0000481!1.60e-07!347;UBERON:0002100!2.39e-07!216;UBERON:0000160!3.22e-07!27;UBERON:0005256!8.01e-07!143 | |ontology_enrichment_uberon=UBERON:0006554!3.82e-27!44;UBERON:0001008!2.56e-26!45;UBERON:0005172!2.09e-24!55;UBERON:0005173!2.09e-24!55;UBERON:0000058!1.10e-22!26;UBERON:0002113!3.97e-21!27;UBERON:0003918!3.97e-21!27;UBERON:0005095!3.97e-21!27;UBERON:0007687!3.97e-21!27;UBERON:0002417!5.88e-21!61;UBERON:0000916!5.88e-21!61;UBERON:0000080!5.92e-19!18;UBERON:0002120!5.92e-19!18;UBERON:0004875!5.92e-19!18;UBERON:0005721!5.92e-19!18;UBERON:0005754!5.92e-19!18;UBERON:0007297!5.92e-19!18;UBERON:0000489!1.32e-18!32;UBERON:0004119!1.99e-18!169;UBERON:0000925!1.99e-18!169;UBERON:0006595!1.99e-18!169;UBERON:0004921!4.80e-18!129;UBERON:0004185!4.80e-18!129;UBERON:0003887!1.25e-17!21;UBERON:0006555!1.43e-17!17;UBERON:0005103!1.43e-17!17;UBERON:0000083!1.43e-17!17;UBERON:0009201!1.43e-17!17;UBERON:0004819!1.43e-17!17;UBERON:0006553!1.43e-17!17;UBERON:0003074!1.43e-17!17;UBERON:0003060!1.43e-17!17;UBERON:0004876!1.36e-16!20;UBERON:0003064!1.83e-16!37;UBERON:0005177!2.29e-16!107;UBERON:0004211!3.93e-16!16;UBERON:0001285!3.93e-16!16;UBERON:0007684!3.93e-16!16;UBERON:0003220!3.93e-16!16;UBERON:0004208!3.93e-16!16;UBERON:0000466!3.08e-15!126;UBERON:0001007!5.30e-15!155;UBERON:0001555!5.30e-15!155;UBERON:0007026!5.30e-15!155;UBERON:0000077!8.02e-14!130;UBERON:0003104!1.12e-13!238;UBERON:0009142!1.12e-13!238;UBERON:0009773!1.68e-13!12;UBERON:0001231!1.68e-13!12;UBERON:0004810!1.68e-13!12;UBERON:0005911!1.48e-12!82;UBERON:0001737!1.79e-12!9;UBERON:0003886!2.25e-12!63;UBERON:0009569!4.10e-12!113;UBERON:0001225!1.08e-11!13;UBERON:0008987!1.08e-11!13;UBERON:0009497!1.33e-11!25;UBERON:0000015!1.33e-11!25;UBERON:0002423!1.33e-11!25;UBERON:0006235!1.33e-11!25;UBERON:0004161!1.33e-11!25;UBERON:0009856!6.81e-11!26;UBERON:0002553!2.34e-10!70;UBERON:0007499!4.33e-10!25;UBERON:0003929!5.38e-10!54;UBERON:0001041!1.40e-09!98;UBERON:0009854!1.73e-09!23;UBERON:0005409!2.80e-09!35;UBERON:0000464!4.25e-09!104;UBERON:0001851!5.04e-09!16;UBERON:0008835!1.08e-08!22;UBERON:0003894!1.08e-08!22;UBERON:0002294!1.67e-08!7;UBERON:0001173!1.67e-08!7;UBERON:0004912!1.67e-08!7;UBERON:0000353!2.39e-08!17;UBERON:0003101!9.08e-08!22;UBERON:0000079!9.08e-08!22;UBERON:0000481!1.60e-07!347;UBERON:0002100!2.39e-07!216;UBERON:0000160!3.22e-07!27;UBERON:0005256!8.01e-07!143 | ||
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| ||
|short_description=p2@HNF1B | |short_description=p2@HNF1B | ||
}} | }} |
Latest revision as of 18:31, 19 September 2015
Short description: | p2@HNF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HNF1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_NM_000458, NM_001165923, uc002hok.3, uc010wdi.1_5end |
EntrezGene: | HNF1B |
HGNC: | 11630 |
UniProt: | P35680Q6FHW6E0YMJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 8.46e-28 | 17 |
kidney epithelial cell | 8.46e-28 | 17 |
kidney tubule cell | 7.23e-25 | 10 |
nephron tubule epithelial cell | 7.23e-25 | 10 |
epithelial cell of nephron | 6.73e-23 | 15 |
epithelial cell | 1.26e-16 | 253 |
kidney cortical cell | 4.56e-16 | 12 |
renal cortical epithelial cell | 4.56e-16 | 12 |
endodermal cell | 2.69e-10 | 58 |
brush border epithelial cell | 8.63e-09 | 3 |
kidney cortex tubule cell | 8.63e-09 | 3 |
epithelial cell of proximal tubule | 8.63e-09 | 3 |
epithelial cell of prostate | 1.58e-07 | 3 |
hepatocyte | 7.45e-07 | 12 |
endo-epithelial cell | 7.65e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.19e-13 | 106 |
adenocarcinoma | 2.68e-12 | 25 |