FFCP PHASE1:Hg19::chr20:33851569..33851604,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:33851569..33851604,+ | |||
|coexpression_cluster_id=C1867 | |||
|description=CAGE_peak_at_chr20:33851569..33851604,+ | |description=CAGE_peak_at_chr20:33851569..33851604,+ | ||
|id=chr20:33851569..33851604,+ | |id=chr20:33851569..33851604,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.36e-24!254;CL:1000497!1.36e-18!18;CL:0002518!1.36e-18!18;CL:1000449!4.18e-16!16;CL:0002681!2.54e-12!13;CL:0002584!2.54e-12!13;CL:0000077!8.22e-12!19;CL:1000507!1.87e-11!12;CL:1000494!1.87e-11!12;CL:1000612!2.23e-07!7;CL:1000746!2.23e-07!7 | |ontology_enrichment_celltype=CL:0000066!5.36e-24!254;CL:1000497!1.36e-18!18;CL:0002518!1.36e-18!18;CL:1000449!4.18e-16!16;CL:0002681!2.54e-12!13;CL:0002584!2.54e-12!13;CL:0000077!8.22e-12!19;CL:1000507!1.87e-11!12;CL:1000494!1.87e-11!12;CL:1000612!2.23e-07!7;CL:1000746!2.23e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:1000497;4.12e-28;17!CL:0002518;4.12e-28;17!CL:1000449;4.10e-27;15!CL:1000507;9.85e-24;10!CL:1000494;9.85e-24;10!CL:0002681;2.71e-19;12!CL:0002584;2.71e-19;12!CL:0000239;1.28e-10;3!CL:1000615;1.28e-10;3!CL:0002306;1.28e-10;3!CL:1000746;1.64e-10;7!CL:1000612;1.64e-10;7!CL:0000077;2.16e-09;19!CL:1000415;7.22e-07;2!CL:0000650;8.52e-07;2!CL:1000500;8.52e-07;2!CL:1000618;8.52e-07;2!CL:1001318;8.52e-07;2!CL:0002173;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.52e-28,17;CL:0002518,3.52e-28,17;CL:1000449,3.48e-27,15;CL:1000507,7.32e-24,10;CL:1000494,7.32e-24,10;CL:0000066,3.70e-22,253;CL:0002681,2.66e-19,12;CL:0002584,2.66e-19,12;CL:0000239,1.18e-10,3;CL:1000615,1.18e-10,3;CL:0002306,1.18e-10,3;CL:1000746,1.61e-10,7;CL:1000612,1.61e-10,7;CL:0000077,1.84e-09,19;CL:1000415,7.12e-07,2;CL:0000650,7.33e-07,2;CL:1000500,7.33e-07,2;CL:1000618,7.33e-07,2;CL:1001318,7.33e-07,2;CL:0002173,7.33e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.34e-21;29!UBERON:0003918;1.31e-07;10!UBERON:0007687;1.31e-07;10!UBERON:0001041;3.71e-07;30 | |||
|ontology_enrichment_disease=DOID:305!6.11e-21!106;DOID:0050687!5.78e-16!143;DOID:162!9.29e-10!235;DOID:14566!3.45e-09!239;DOID:299!6.50e-07!25 | |ontology_enrichment_disease=DOID:305!6.11e-21!106;DOID:0050687!5.78e-16!143;DOID:162!9.29e-10!235;DOID:14566!3.45e-09!239;DOID:299!6.50e-07!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.76e-17,106;DOID:0050687,6.49e-13,143;DOID:162,9.37e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002113!3.94e-22!27;UBERON:0003918!3.94e-22!27;UBERON:0005095!3.94e-22!27;UBERON:0007687!3.94e-22!27;UBERON:0000058!1.55e-20!26;UBERON:0000080!2.26e-18!18;UBERON:0002120!2.26e-18!18;UBERON:0004875!2.26e-18!18;UBERON:0005721!2.26e-18!18;UBERON:0005754!2.26e-18!18;UBERON:0007297!2.26e-18!18;UBERON:0000489!1.83e-17!32;UBERON:0006555!2.53e-17!17;UBERON:0005103!2.53e-17!17;UBERON:0000083!2.53e-17!17;UBERON:0009201!2.53e-17!17;UBERON:0004819!2.53e-17!17;UBERON:0006553!2.53e-17!17;UBERON:0003074!2.53e-17!17;UBERON:0003060!2.53e-17!17;UBERON:0006554!3.63e-17!44;UBERON:0005172!1.39e-16!55;UBERON:0005173!1.39e-16!55;UBERON:0001008!1.39e-16!45;UBERON:0004211!4.18e-16!16;UBERON:0001285!4.18e-16!16;UBERON:0007684!4.18e-16!16;UBERON:0003220!4.18e-16!16;UBERON:0004208!4.18e-16!16;UBERON:0004876!5.39e-16!20;UBERON:0002417!4.78e-15!61;UBERON:0000916!4.78e-15!61;UBERON:0003887!5.57e-15!21;UBERON:0000466!1.59e-13!126;UBERON:0003064!1.87e-13!37;UBERON:0003886!2.74e-13!63;UBERON:0001737!3.05e-13!9;UBERON:0005177!2.33e-12!107;UBERON:0001225!2.54e-12!13;UBERON:0008987!2.54e-12!13;UBERON:0000464!1.59e-11!104;UBERON:0001851!1.66e-11!16;UBERON:0009773!1.87e-11!12;UBERON:0001231!1.87e-11!12;UBERON:0004810!1.87e-11!12;UBERON:0002553!5.12e-11!70;UBERON:0009569!2.70e-10!113;UBERON:0001048!1.02e-09!168;UBERON:0008947!1.92e-09!38;UBERON:0003258!1.92e-09!38;UBERON:0000481!2.58e-09!347;UBERON:0000062!4.46e-09!511;UBERON:0000353!1.13e-08!17;UBERON:0003104!2.44e-08!238;UBERON:0009142!2.44e-08!238;UBERON:0003101!3.67e-08!22;UBERON:0000079!3.67e-08!22;UBERON:0004921!6.00e-08!129;UBERON:0004185!6.00e-08!129;UBERON:0003135!7.71e-08!11;UBERON:0000074!2.23e-07!7;UBERON:0001229!2.23e-07!7;UBERON:0001230!2.23e-07!7;UBERON:0005749!2.23e-07!7;UBERON:0004199!2.23e-07!7;UBERON:0004209!2.23e-07!7;UBERON:0004198!2.23e-07!7;UBERON:0000064!3.30e-07!219;UBERON:0000077!7.55e-07!130;UBERON:0000473!9.02e-07!8 | |ontology_enrichment_uberon=UBERON:0002113!3.94e-22!27;UBERON:0003918!3.94e-22!27;UBERON:0005095!3.94e-22!27;UBERON:0007687!3.94e-22!27;UBERON:0000058!1.55e-20!26;UBERON:0000080!2.26e-18!18;UBERON:0002120!2.26e-18!18;UBERON:0004875!2.26e-18!18;UBERON:0005721!2.26e-18!18;UBERON:0005754!2.26e-18!18;UBERON:0007297!2.26e-18!18;UBERON:0000489!1.83e-17!32;UBERON:0006555!2.53e-17!17;UBERON:0005103!2.53e-17!17;UBERON:0000083!2.53e-17!17;UBERON:0009201!2.53e-17!17;UBERON:0004819!2.53e-17!17;UBERON:0006553!2.53e-17!17;UBERON:0003074!2.53e-17!17;UBERON:0003060!2.53e-17!17;UBERON:0006554!3.63e-17!44;UBERON:0005172!1.39e-16!55;UBERON:0005173!1.39e-16!55;UBERON:0001008!1.39e-16!45;UBERON:0004211!4.18e-16!16;UBERON:0001285!4.18e-16!16;UBERON:0007684!4.18e-16!16;UBERON:0003220!4.18e-16!16;UBERON:0004208!4.18e-16!16;UBERON:0004876!5.39e-16!20;UBERON:0002417!4.78e-15!61;UBERON:0000916!4.78e-15!61;UBERON:0003887!5.57e-15!21;UBERON:0000466!1.59e-13!126;UBERON:0003064!1.87e-13!37;UBERON:0003886!2.74e-13!63;UBERON:0001737!3.05e-13!9;UBERON:0005177!2.33e-12!107;UBERON:0001225!2.54e-12!13;UBERON:0008987!2.54e-12!13;UBERON:0000464!1.59e-11!104;UBERON:0001851!1.66e-11!16;UBERON:0009773!1.87e-11!12;UBERON:0001231!1.87e-11!12;UBERON:0004810!1.87e-11!12;UBERON:0002553!5.12e-11!70;UBERON:0009569!2.70e-10!113;UBERON:0001048!1.02e-09!168;UBERON:0008947!1.92e-09!38;UBERON:0003258!1.92e-09!38;UBERON:0000481!2.58e-09!347;UBERON:0000062!4.46e-09!511;UBERON:0000353!1.13e-08!17;UBERON:0003104!2.44e-08!238;UBERON:0009142!2.44e-08!238;UBERON:0003101!3.67e-08!22;UBERON:0000079!3.67e-08!22;UBERON:0004921!6.00e-08!129;UBERON:0004185!6.00e-08!129;UBERON:0003135!7.71e-08!11;UBERON:0000074!2.23e-07!7;UBERON:0001229!2.23e-07!7;UBERON:0001230!2.23e-07!7;UBERON:0005749!2.23e-07!7;UBERON:0004199!2.23e-07!7;UBERON:0004209!2.23e-07!7;UBERON:0004198!2.23e-07!7;UBERON:0000064!3.30e-07!219;UBERON:0000077!7.55e-07!130;UBERON:0000473!9.02e-07!8 | ||
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|short_description=p@chr20:33851569..33851604,+ | |short_description=p@chr20:33851569..33851604,+ | ||
}} | }} |
Latest revision as of 13:22, 28 July 2015
Short description: | p@chr20:33851569..33851604, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33851569..33851604, + |
Coexpression cluster: | C1867_renal_bile_clear_Alveolar_mesothelioma_lung_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.52e-28 | 17 |
kidney epithelial cell | 3.52e-28 | 17 |
epithelial cell of nephron | 3.48e-27 | 15 |
kidney tubule cell | 7.32e-24 | 10 |
nephron tubule epithelial cell | 7.32e-24 | 10 |
epithelial cell | 3.70e-22 | 253 |
kidney cortical cell | 2.66e-19 | 12 |
renal cortical epithelial cell | 2.66e-19 | 12 |
brush border epithelial cell | 1.18e-10 | 3 |
kidney cortex tubule cell | 1.18e-10 | 3 |
epithelial cell of proximal tubule | 1.18e-10 | 3 |
glomerular cell | 1.61e-10 | 7 |
kidney corpuscule cell | 1.61e-10 | 7 |
mesothelial cell | 1.84e-09 | 19 |
epithelial cell of gall bladder | 7.12e-07 | 2 |
mesangial cell | 7.33e-07 | 2 |
kidney interstitial cell | 7.33e-07 | 2 |
juxtaglomerular complex cell | 7.33e-07 | 2 |
renal interstitial pericyte | 7.33e-07 | 2 |
extraglomerular mesangial cell | 7.33e-07 | 2 |
Ontology term | p-value | n |
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