FFCP PHASE1:Hg19::chr20:30307655..30307679,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:30307655..30307679,- | |||
|description=CAGE_peak_at_chr20:30307655..30307679,- | |description=CAGE_peak_at_chr20:30307655..30307679,- | ||
|id=chr20:30307655..30307679,- | |id=chr20:30307655..30307679,- | ||
|ontology_enrichment_celltype=CL:0000066!1.07e-21!254;CL:1000497!1.89e-14!18;CL:0002518!1.89e-14!18;CL:1000449!2.42e-12!16;CL:0000223!1.37e-10!59;CL:1000507!2.29e-10!12;CL:1000494!2.29e-10!12;CL:0002681!6.15e-09!13;CL:0002584!6.15e-09!13;CL:0002076!4.47e-08!43 | |ontology_enrichment_celltype=CL:0000066!1.07e-21!254;CL:1000497!1.89e-14!18;CL:0002518!1.89e-14!18;CL:1000449!2.42e-12!16;CL:0000223!1.37e-10!59;CL:1000507!2.29e-10!12;CL:1000494!2.29e-10!12;CL:0002681!6.15e-09!13;CL:0002584!6.15e-09!13;CL:0002076!4.47e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:1000497;4.99e-25;17!CL:0002518;4.99e-25;17!CL:1000449;3.90e-23;15!CL:1000507;1.46e-21;10!CL:1000494;1.46e-21;10!CL:0002681;3.26e-13;12!CL:0002584;3.26e-13;12!CL:0000322;2.67e-07;3!CL:0000239;3.32e-07;3!CL:1000615;3.32e-07;3!CL:0002306;3.32e-07;3!CL:0002149;5.13e-07;6!CL:0002255;5.13e-07;6 | |ontology_enrichment_celltype_v019=CL:1000497;4.99e-25;17!CL:0002518;4.99e-25;17!CL:1000449;3.90e-23;15!CL:1000507;1.46e-21;10!CL:1000494;1.46e-21;10!CL:0002681;3.26e-13;12!CL:0002584;3.26e-13;12!CL:0000322;2.67e-07;3!CL:0000239;3.32e-07;3!CL:1000615;3.32e-07;3!CL:0002306;3.32e-07;3!CL:0002149;5.13e-07;6!CL:0002255;5.13e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:1000497,6.68e-25,17;CL:0002518,6.68e-25,17;CL:1000449,5.68e-23,15;CL:1000507,2.42e-21,10;CL:1000494,2.42e-21,10;CL:0000066,8.01e-17,253;CL:0002681,4.35e-13,12;CL:0002584,4.35e-13,12;CL:0000223,6.41e-09,58;CL:0002076,2.44e-07,42;CL:0000322,2.98e-07,3;CL:0000239,3.37e-07,3;CL:1000615,3.37e-07,3;CL:0002306,3.37e-07,3;CL:0002149,5.19e-07,6;CL:0002255,5.19e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009497;4.02e-12;13!UBERON:0001041;8.78e-11;30!UBERON:0004161;9.21e-07;11 | |ontology_enrichment_development_v019=UBERON:0009497;4.02e-12;13!UBERON:0001041;8.78e-11;30!UBERON:0004161;9.21e-07;11 | ||
|ontology_enrichment_disease=DOID:305!2.28e-19!106;DOID:0050687!2.60e-14!143;DOID:299!1.43e-10!25;DOID:14566!7.91e-10!239;DOID:162!1.28e-09!235;DOID:120!8.28e-07!27 | |ontology_enrichment_disease=DOID:305!2.28e-19!106;DOID:0050687!2.60e-14!143;DOID:299!1.43e-10!25;DOID:14566!7.91e-10!239;DOID:162!1.28e-09!235;DOID:120!8.28e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:299;2.73e-23;25!DOID:3493;7.69e-11;2!DOID:3910;1.49e-10;2!DOID:4468;1.30e-09;2!DOID:305;1.50e-07;106!DOID:7;1.62e-07;39!DOID:3001;5.13e-07;6!DOID:0050615;5.42e-07;16 | |ontology_enrichment_disease_v019=DOID:299;2.73e-23;25!DOID:3493;7.69e-11;2!DOID:3910;1.49e-10;2!DOID:4468;1.30e-09;2!DOID:305;1.50e-07;106!DOID:7;1.62e-07;39!DOID:3001;5.13e-07;6!DOID:0050615;5.42e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:299,2.50e-23,25;DOID:305,5.26e-19,106;DOID:0050687,6.14e-14,143;DOID:3493,7.53e-11,2;DOID:3910,1.76e-10,2;DOID:4468,1.19e-09,2;DOID:7,7.78e-08,39;DOID:162,5.05e-07,235;DOID:3001,5.19e-07,6;DOID:0050615,5.22e-07,16;DOID:14566,9.20e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000058!1.76e-13!26;UBERON:0004211!2.42e-12!16;UBERON:0001285!2.42e-12!16;UBERON:0007684!2.42e-12!16;UBERON:0003220!2.42e-12!16;UBERON:0004208!2.42e-12!16;UBERON:0000466!3.20e-12!126;UBERON:0006555!2.29e-11!17;UBERON:0005103!2.29e-11!17;UBERON:0000083!2.29e-11!17;UBERON:0009201!2.29e-11!17;UBERON:0004819!2.29e-11!17;UBERON:0006553!2.29e-11!17;UBERON:0003074!2.29e-11!17;UBERON:0003060!2.29e-11!17;UBERON:0005177!2.58e-11!107;UBERON:0009569!6.10e-11!113;UBERON:0000464!1.03e-10!104;UBERON:0002113!1.30e-10!27;UBERON:0003918!1.30e-10!27;UBERON:0005095!1.30e-10!27;UBERON:0007687!1.30e-10!27;UBERON:0000080!1.67e-10!18;UBERON:0002120!1.67e-10!18;UBERON:0004875!1.67e-10!18;UBERON:0005721!1.67e-10!18;UBERON:0005754!1.67e-10!18;UBERON:0007297!1.67e-10!18;UBERON:0009773!2.29e-10!12;UBERON:0001231!2.29e-10!12;UBERON:0004810!2.29e-10!12;UBERON:0000489!3.17e-09!32;UBERON:0004876!4.78e-09!20;UBERON:0006554!5.28e-09!44;UBERON:0001225!6.15e-09!13;UBERON:0008987!6.15e-09!13;UBERON:0005911!6.92e-09!82;UBERON:0001008!1.18e-08!45;UBERON:0003886!1.19e-08!63;UBERON:0003887!1.99e-08!21;UBERON:0003064!2.34e-08!37;UBERON:0005172!2.93e-08!55;UBERON:0005173!2.93e-08!55;UBERON:0001851!3.49e-08!16;UBERON:0002417!5.09e-08!61;UBERON:0000916!5.09e-08!61;UBERON:0002553!8.25e-08!70;UBERON:0002100!9.76e-08!216;UBERON:0000353!1.33e-07!17;UBERON:0005153!3.12e-07!37 | |ontology_enrichment_uberon=UBERON:0000058!1.76e-13!26;UBERON:0004211!2.42e-12!16;UBERON:0001285!2.42e-12!16;UBERON:0007684!2.42e-12!16;UBERON:0003220!2.42e-12!16;UBERON:0004208!2.42e-12!16;UBERON:0000466!3.20e-12!126;UBERON:0006555!2.29e-11!17;UBERON:0005103!2.29e-11!17;UBERON:0000083!2.29e-11!17;UBERON:0009201!2.29e-11!17;UBERON:0004819!2.29e-11!17;UBERON:0006553!2.29e-11!17;UBERON:0003074!2.29e-11!17;UBERON:0003060!2.29e-11!17;UBERON:0005177!2.58e-11!107;UBERON:0009569!6.10e-11!113;UBERON:0000464!1.03e-10!104;UBERON:0002113!1.30e-10!27;UBERON:0003918!1.30e-10!27;UBERON:0005095!1.30e-10!27;UBERON:0007687!1.30e-10!27;UBERON:0000080!1.67e-10!18;UBERON:0002120!1.67e-10!18;UBERON:0004875!1.67e-10!18;UBERON:0005721!1.67e-10!18;UBERON:0005754!1.67e-10!18;UBERON:0007297!1.67e-10!18;UBERON:0009773!2.29e-10!12;UBERON:0001231!2.29e-10!12;UBERON:0004810!2.29e-10!12;UBERON:0000489!3.17e-09!32;UBERON:0004876!4.78e-09!20;UBERON:0006554!5.28e-09!44;UBERON:0001225!6.15e-09!13;UBERON:0008987!6.15e-09!13;UBERON:0005911!6.92e-09!82;UBERON:0001008!1.18e-08!45;UBERON:0003886!1.19e-08!63;UBERON:0003887!1.99e-08!21;UBERON:0003064!2.34e-08!37;UBERON:0005172!2.93e-08!55;UBERON:0005173!2.93e-08!55;UBERON:0001851!3.49e-08!16;UBERON:0002417!5.09e-08!61;UBERON:0000916!5.09e-08!61;UBERON:0002553!8.25e-08!70;UBERON:0002100!9.76e-08!216;UBERON:0000353!1.33e-07!17;UBERON:0005153!3.12e-07!37 | ||
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| ||
|short_description=p@chr20:30307655..30307679,- | |short_description=p@chr20:30307655..30307679,- | ||
}} | }} |
Latest revision as of 12:50, 28 July 2015
Short description: | p@chr20:30307655..30307679, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:30307655..30307679, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 6.68e-25 | 17 |
kidney epithelial cell | 6.68e-25 | 17 |
epithelial cell of nephron | 5.68e-23 | 15 |
kidney tubule cell | 2.42e-21 | 10 |
nephron tubule epithelial cell | 2.42e-21 | 10 |
epithelial cell | 8.01e-17 | 253 |
kidney cortical cell | 4.35e-13 | 12 |
renal cortical epithelial cell | 4.35e-13 | 12 |
endodermal cell | 6.41e-09 | 58 |
endo-epithelial cell | 2.44e-07 | 42 |
pneumocyte | 2.98e-07 | 3 |
brush border epithelial cell | 3.37e-07 | 3 |
kidney cortex tubule cell | 3.37e-07 | 3 |
epithelial cell of proximal tubule | 3.37e-07 | 3 |
epithelial cell of uterus | 5.19e-07 | 6 |
stromal cell of endometrium | 5.19e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 2.50e-23 | 25 |
carcinoma | 5.26e-19 | 106 |
cell type cancer | 6.14e-14 | 143 |
signet ring cell adenocarcinoma | 7.53e-11 | 2 |
lung adenocarcinoma | 1.76e-10 | 2 |
clear cell adenocarcinoma | 1.19e-09 | 2 |
disease of anatomical entity | 7.78e-08 | 39 |
cancer | 5.05e-07 | 235 |
female reproductive endometrioid cancer | 5.19e-07 | 6 |
respiratory system cancer | 5.22e-07 | 16 |
disease of cellular proliferation | 9.20e-07 | 239 |