FFCP PHASE1:Hg19::chr20:33851569..33851604,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:33851569..33851604,+ | |||
|coexpression_cluster_id=C1867 | |||
|description=CAGE_peak_at_chr20:33851569..33851604,+ | |||
|id=chr20:33851569..33851604,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.36e-24!254;CL:1000497!1.36e-18!18;CL:0002518!1.36e-18!18;CL:1000449!4.18e-16!16;CL:0002681!2.54e-12!13;CL:0002584!2.54e-12!13;CL:0000077!8.22e-12!19;CL:1000507!1.87e-11!12;CL:1000494!1.87e-11!12;CL:1000612!2.23e-07!7;CL:1000746!2.23e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000497;4.12e-28;17!CL:0002518;4.12e-28;17!CL:1000449;4.10e-27;15!CL:1000507;9.85e-24;10!CL:1000494;9.85e-24;10!CL:0002681;2.71e-19;12!CL:0002584;2.71e-19;12!CL:0000239;1.28e-10;3!CL:1000615;1.28e-10;3!CL:0002306;1.28e-10;3!CL:1000746;1.64e-10;7!CL:1000612;1.64e-10;7!CL:0000077;2.16e-09;19!CL:1000415;7.22e-07;2!CL:0000650;8.52e-07;2!CL:1000500;8.52e-07;2!CL:1000618;8.52e-07;2!CL:1001318;8.52e-07;2!CL:0002173;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.52e-28,17;CL:0002518,3.52e-28,17;CL:1000449,3.48e-27,15;CL:1000507,7.32e-24,10;CL:1000494,7.32e-24,10;CL:0000066,3.70e-22,253;CL:0002681,2.66e-19,12;CL:0002584,2.66e-19,12;CL:0000239,1.18e-10,3;CL:1000615,1.18e-10,3;CL:0002306,1.18e-10,3;CL:1000746,1.61e-10,7;CL:1000612,1.61e-10,7;CL:0000077,1.84e-09,19;CL:1000415,7.12e-07,2;CL:0000650,7.33e-07,2;CL:1000500,7.33e-07,2;CL:1000618,7.33e-07,2;CL:1001318,7.33e-07,2;CL:0002173,7.33e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.34e-21;29!UBERON:0003918;1.31e-07;10!UBERON:0007687;1.31e-07;10!UBERON:0001041;3.71e-07;30 | |||
|ontology_enrichment_disease=DOID:305!6.11e-21!106;DOID:0050687!5.78e-16!143;DOID:162!9.29e-10!235;DOID:14566!3.45e-09!239;DOID:299!6.50e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.76e-17,106;DOID:0050687,6.49e-13,143;DOID:162,9.37e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002113!3.94e-22!27;UBERON:0003918!3.94e-22!27;UBERON:0005095!3.94e-22!27;UBERON:0007687!3.94e-22!27;UBERON:0000058!1.55e-20!26;UBERON:0000080!2.26e-18!18;UBERON:0002120!2.26e-18!18;UBERON:0004875!2.26e-18!18;UBERON:0005721!2.26e-18!18;UBERON:0005754!2.26e-18!18;UBERON:0007297!2.26e-18!18;UBERON:0000489!1.83e-17!32;UBERON:0006555!2.53e-17!17;UBERON:0005103!2.53e-17!17;UBERON:0000083!2.53e-17!17;UBERON:0009201!2.53e-17!17;UBERON:0004819!2.53e-17!17;UBERON:0006553!2.53e-17!17;UBERON:0003074!2.53e-17!17;UBERON:0003060!2.53e-17!17;UBERON:0006554!3.63e-17!44;UBERON:0005172!1.39e-16!55;UBERON:0005173!1.39e-16!55;UBERON:0001008!1.39e-16!45;UBERON:0004211!4.18e-16!16;UBERON:0001285!4.18e-16!16;UBERON:0007684!4.18e-16!16;UBERON:0003220!4.18e-16!16;UBERON:0004208!4.18e-16!16;UBERON:0004876!5.39e-16!20;UBERON:0002417!4.78e-15!61;UBERON:0000916!4.78e-15!61;UBERON:0003887!5.57e-15!21;UBERON:0000466!1.59e-13!126;UBERON:0003064!1.87e-13!37;UBERON:0003886!2.74e-13!63;UBERON:0001737!3.05e-13!9;UBERON:0005177!2.33e-12!107;UBERON:0001225!2.54e-12!13;UBERON:0008987!2.54e-12!13;UBERON:0000464!1.59e-11!104;UBERON:0001851!1.66e-11!16;UBERON:0009773!1.87e-11!12;UBERON:0001231!1.87e-11!12;UBERON:0004810!1.87e-11!12;UBERON:0002553!5.12e-11!70;UBERON:0009569!2.70e-10!113;UBERON:0001048!1.02e-09!168;UBERON:0008947!1.92e-09!38;UBERON:0003258!1.92e-09!38;UBERON:0000481!2.58e-09!347;UBERON:0000062!4.46e-09!511;UBERON:0000353!1.13e-08!17;UBERON:0003104!2.44e-08!238;UBERON:0009142!2.44e-08!238;UBERON:0003101!3.67e-08!22;UBERON:0000079!3.67e-08!22;UBERON:0004921!6.00e-08!129;UBERON:0004185!6.00e-08!129;UBERON:0003135!7.71e-08!11;UBERON:0000074!2.23e-07!7;UBERON:0001229!2.23e-07!7;UBERON:0001230!2.23e-07!7;UBERON:0005749!2.23e-07!7;UBERON:0004199!2.23e-07!7;UBERON:0004209!2.23e-07!7;UBERON:0004198!2.23e-07!7;UBERON:0000064!3.30e-07!219;UBERON:0000077!7.55e-07!130;UBERON:0000473!9.02e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;4.19e-33;24!UBERON:0011143;4.19e-33;24!UBERON:0006555;4.10e-27;15!UBERON:0004819;4.10e-27;15!UBERON:0001285;4.10e-27;15!UBERON:0007684;4.10e-27;15!UBERON:0000489;1.28e-26;29!UBERON:0001737;1.39e-26;9!UBERON:0001557;1.39e-26;9!UBERON:0006554;1.39e-25;30!UBERON:0001008;1.39e-25;30!UBERON:0004211;9.85e-24;10!UBERON:0009773;9.85e-24;10!UBERON:0001231;9.85e-24;10!UBERON:0004810;9.85e-24;10!UBERON:0001225;2.71e-19;12!UBERON:0008987;2.71e-19;12!UBERON:0001851;7.25e-19;15!UBERON:0000353;4.44e-15;15!UBERON:0005172;5.45e-14;52!UBERON:0005173;5.45e-14;52!UBERON:0000065;7.24e-13;44!UBERON:0000072;4.90e-11;37!UBERON:0006853;1.28e-10;3!UBERON:0007685;1.28e-10;3!UBERON:0004134;1.28e-10;3!UBERON:0000074;1.64e-10;7!UBERON:0001229;1.64e-10;7!UBERON:0005177;8.69e-10;99!UBERON:0002417;3.85e-09;58!UBERON:0000916;3.85e-09;58!UBERON:0002294;1.64e-07;7!UBERON:0001173;1.64e-07;7!UBERON:0003567;8.52e-07;2!UBERON:0003838;8.52e-07;2!UBERON:0003586;8.52e-07;2!UBERON:0005169;8.52e-07;2!UBERON:0002321;8.52e-07;2!UBERON:0005215;8.52e-07;2!UBERON:0002303;8.52e-07;2!UBERON:0002319;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.64e-34,26;UBERON:0003918,4.64e-34,26;UBERON:0011143,4.64e-34,26;UBERON:0005095,4.64e-34,26;UBERON:0007687,4.64e-34,26;UBERON:0006555,9.49e-30,16;UBERON:0004819,9.49e-30,16;UBERON:0000489,8.68e-28,31;UBERON:0004211,3.48e-27,15;UBERON:0009773,3.48e-27,15;UBERON:0001231,3.48e-27,15;UBERON:0001285,3.48e-27,15;UBERON:0007684,3.48e-27,15;UBERON:0004208,3.48e-27,15;UBERON:0001737,1.73e-26,9;UBERON:0004810,7.32e-24,10;UBERON:0005172,5.38e-22,54;UBERON:0005173,5.38e-22,54;UBERON:0006554,4.69e-21,47;UBERON:0001008,1.66e-20,48;UBERON:0005177,5.99e-20,101;UBERON:0001225,2.66e-19,12;UBERON:0008987,2.66e-19,12;UBERON:0002417,3.27e-19,60;UBERON:0000916,3.27e-19,60;UBERON:0001851,7.20e-19,15;UBERON:0008947,2.66e-17,38;UBERON:0003258,2.66e-17,38;UBERON:0009569,8.12e-16,112;UBERON:0000353,4.38e-15,15;UBERON:0005103,5.97e-13,8;UBERON:0000083,5.97e-13,8;UBERON:0009201,5.97e-13,8;UBERON:0006553,5.97e-13,8;UBERON:0003074,5.97e-13,8;UBERON:0003060,5.97e-13,8;UBERON:0000058,1.05e-11,19;UBERON:0001557,1.31e-11,19;UBERON:0000080,1.95e-11,9;UBERON:0002120,1.95e-11,9;UBERON:0004875,1.95e-11,9;UBERON:0005721,1.95e-11,9;UBERON:0005754,1.95e-11,9;UBERON:0007297,1.95e-11,9;UBERON:0000065,5.38e-11,54;UBERON:0006853,1.18e-10,3;UBERON:0007685,1.18e-10,3;UBERON:0004134,1.18e-10,3;UBERON:0010532,1.61e-10,7;UBERON:0000074,1.61e-10,7;UBERON:0001229,1.61e-10,7;UBERON:0001230,1.61e-10,7;UBERON:0003220,1.61e-10,7;UBERON:0005749,1.61e-10,7;UBERON:0004199,1.61e-10,7;UBERON:0004209,1.61e-10,7;UBERON:0004198,1.61e-10,7;UBERON:0003103,3.48e-10,68;UBERON:0004921,7.21e-10,118;UBERON:0000072,8.02e-10,47;UBERON:0002100,1.73e-09,199;UBERON:0001041,1.90e-09,87;UBERON:0004876,3.11e-09,11;UBERON:0001007,1.57e-08,145;UBERON:0001555,1.57e-08,145;UBERON:0007026,1.57e-08,145;UBERON:0003887,2.08e-08,12;UBERON:0001048,2.84e-07,160;UBERON:0004119,3.70e-07,160;UBERON:0000925,3.70e-07,160;UBERON:0006595,3.70e-07,160;UBERON:0003064,3.73e-07,28;UBERON:0001004,5.04e-07,74;UBERON:0003567,7.33e-07,2;UBERON:0003838,7.33e-07,2;UBERON:0003586,7.33e-07,2;UBERON:0005169,7.33e-07,2;UBERON:0002321,7.33e-07,2;UBERON:0005215,7.33e-07,2;UBERON:0002303,7.33e-07,2;UBERON:0002319,7.33e-07,2 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,14.989770126592,45.3570759182078,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0,4.91171533116422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,6.15195360207188,5.56329477257736,4.09718750801919,5.4044046638873,4.57546832594053,4.50814176311084,4.71909578560575,5.101758093259,1.53898862778556,0,0,0.4115740113314,0,0,0,0,0,2.58275720940538,0.686271241194102,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,1.79951384127703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,1.00253235151642,0,0,0,0,2.25599806453706,0.616122696835318,9.41219723012226,5.84556898613043,1.58327443339314,1.13733384070897,0,0.647747748306418,1.54227252690289,1.62567862526312,3.01013864312912,9.94017464875649,14.959368160717,5.59686886805446,0,0,0,3.28014645699706,1.62689197332152,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.23994825738598,0.23874448473769,0,0,0,0,0,0,0.422250816255987,0,0.276283915531148,0,0.20453736500431,0,0,15.6370930996349,52.2741830052779,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,1.41832609060762,0,0,0,0,0,0,0.884634079449797,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,44.7257894356065,0.282706142867882,0,0,1.14994833854341,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,2.84609546029793,0,0.173559738335131,0,0,2.97035336011451,0.171986032471617,0.290268993867255,0.219267951258557,0.164230914106418,0,0,0.225980740780532,0,0,0,4.69323318563527,1.52301758477914,0,1.59847687665704,0,0,0,1.87271237384595,0,0,0.543616824294456,0.732219924186332,0,0,0,0,0,0.429765441419957,0,0,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,8.0710534842094,0,0,0,0,0,0.415440338029185,0,0,0,0,12.4513017532733,3.19972987623488,0,0,0.575745591958336,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,30.624543981295,0,5.87330769122321,0.314408610199332,5.38510771951354,0,0,0,0,0,0,0,0,0,0,0,0,2.86704597845036,1.10929051536852,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,14.36758662212,0.260994291965212,0.453411851024545,0.231522474323834,0.244736704506468,0,1.54400723580486,40.1289810729034,0,10.0315299900876,3.88567613502067,8.1997285948143,7.59946751808637,0,0,0,0,0,0,0.245772908753719,6.97330007083469,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,5.47059807863165,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0.177404740325278,0,0,0,0,14.0650670651922,0.333694205676207,0.078493092850514,0,0,0,43.4014458349429,0.9555033757741,0.0714765441766563,0,0.581207126840626,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,1.14553434272025,0,0,3.02009665854039,0.490751168076215,0.121917924982269,0,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,1.5870805215462,0,0,0,0,0.218531143927391,0,0.203977659483963,0.26721740526556,1.10273879441814,0.250707539292375,0.151557396436479,0.803892390468535,0,0,0,0,0,0,0,0.572824424503484,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr20:33851569..33851604,+ | |||
}} |
Latest revision as of 13:22, 28 July 2015
Short description: | p@chr20:33851569..33851604, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33851569..33851604, + |
Coexpression cluster: | C1867_renal_bile_clear_Alveolar_mesothelioma_lung_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.52e-28 | 17 |
kidney epithelial cell | 3.52e-28 | 17 |
epithelial cell of nephron | 3.48e-27 | 15 |
kidney tubule cell | 7.32e-24 | 10 |
nephron tubule epithelial cell | 7.32e-24 | 10 |
epithelial cell | 3.70e-22 | 253 |
kidney cortical cell | 2.66e-19 | 12 |
renal cortical epithelial cell | 2.66e-19 | 12 |
brush border epithelial cell | 1.18e-10 | 3 |
kidney cortex tubule cell | 1.18e-10 | 3 |
epithelial cell of proximal tubule | 1.18e-10 | 3 |
glomerular cell | 1.61e-10 | 7 |
kidney corpuscule cell | 1.61e-10 | 7 |
mesothelial cell | 1.84e-09 | 19 |
epithelial cell of gall bladder | 7.12e-07 | 2 |
mesangial cell | 7.33e-07 | 2 |
kidney interstitial cell | 7.33e-07 | 2 |
juxtaglomerular complex cell | 7.33e-07 | 2 |
renal interstitial pericyte | 7.33e-07 | 2 |
extraglomerular mesangial cell | 7.33e-07 | 2 |
Ontology term | p-value | n |
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