FFCP PHASE1:Mm9::chr17:28712726..28712748,+: Difference between revisions
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{{FFCP|EntrezGene=328789|HGNC=|MCL_coexpression_id=47|UniProt=E9Q8H7,Q4KL25,B2RWL4|association_with_transcript=62bp_to_ENSMUST00000163218,NM_026571,uc008brg.2,uc012aoh.1_5end|description=CAGE_peak_3_at_Lhfpl5_5end|id=chr17:28712726..28712748,+|ontology_enrichment_celltype=CL:0000540!1.05e-10!33;CL:0000047!1.05e-10!33;CL:0000031!1.05e-10!33;CL:0000404!1.05e-10!33;CL:0000393!3.05e-08!39;CL:0000211!3.05e-08!39;CL:0000221!8.08e-08!44;CL:0000133!8.08e-08!44;CL:0000117!4.56e-07!23;CL:0000337!4.56e-07!23;CL:0002319!5.25e-07!43|ontology_enrichment_celltype_v019_2=CL:0000197,1.84e-23,2;CL:0002491,1.84e-23,2;CL:0000098,1.84e-23,2;CL:0002614,2.04e-15,3;CL:0002374,1.20e-12,1;CL:0000202,1.20e-12,1;CL:0000199,1.20e-12,1;CL:0000855,1.20e-12,1;CL:0000589,1.20e-12,1;CL:0000710,1.55e-12,1;CL:0002077,1.55e-12,1;CL:0005014,1.55e-12,1;CL:0002315,1.55e-12,1;CL:0002490,1.55e-12,1;CL:0000221,5.01e-09,44;CL:0000133,5.01e-09,44;CL:0000540,1.83e-08,33;CL:0000047,1.83e-08,33;CL:0000031,1.83e-08,33;CL:0000404,1.83e-08,33;CL:0000117,6.58e-08,23;CL:0000337,6.58e-08,23;CL:0000393,3.49e-07,39;CL:0000211,3.49e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.29e-15!71;UBERON:0003075!5.29e-15!71;UBERON:0007284!5.29e-15!71;UBERON:0004121!7.19e-14!102;UBERON:0000924!7.19e-14!102;UBERON:0006601!7.19e-14!102;UBERON:0001017!3.92e-12!73;UBERON:0005743!3.92e-12!73;UBERON:0000073!1.47e-11!75;UBERON:0001016!1.47e-11!75;UBERON:0003076!5.42e-11!12;UBERON:0003057!5.42e-11!12;UBERON:0000033!7.80e-11!63;UBERON:0001049!9.48e-10!52;UBERON:0005068!9.48e-10!52;UBERON:0006241!9.48e-10!52;UBERON:0007135!9.48e-10!52;UBERON:0002298!1.80e-09!6;UBERON:0002240!2.84e-09!6;UBERON:0005174!2.84e-09!6;UBERON:0001137!2.84e-09!6;UBERON:0002420!3.06e-08!8;UBERON:0007245!3.06e-08!8;UBERON:0010009!3.06e-08!8;UBERON:0010011!3.06e-08!8;UBERON:0000454!3.06e-08!8;UBERON:0001948!4.66e-08!5;UBERON:0002315!4.66e-08!5;UBERON:0000020!2.22e-07!12;UBERON:0001032!2.22e-07!12;UBERON:0004456!2.22e-07!12;UBERON:0002950!5.13e-07!4;UBERON:0001891!5.13e-07!4;UBERON:0009616!5.13e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0004766,1.84e-23,2;UBERON:0008193,1.84e-23,2;UBERON:0005913,1.84e-23,2;UBERON:0011158,1.84e-23,2;UBERON:0005744,1.84e-23,2;UBERON:0003457,1.84e-23,2;UBERON:0008001,1.84e-23,2;UBERON:0007497,1.84e-23,2;UBERON:0009955,1.84e-23,2;UBERON:0003067,1.84e-23,2;UBERON:0002546,1.84e-23,2;UBERON:0007914,1.84e-23,2;UBERON:0005253,1.84e-23,2;UBERON:0002227,1.84e-23,2;UBERON:0001846,1.84e-23,2;UBERON:0004339,1.84e-23,2;UBERON:0002105,1.84e-23,2;UBERON:0001678,1.84e-23,2;UBERON:0003128,1.84e-23,2;UBERON:0001694,1.84e-23,2;UBERON:0004681,1.84e-23,2;UBERON:0001839,1.84e-23,2;UBERON:0001690,1.84e-23,2;UBERON:0001844,1.84e-23,2;UBERON:0001849,1.84e-23,2;UBERON:0002499,1.84e-23,2;UBERON:0001855,1.84e-23,2;UBERON:0011137,1.84e-23,2;UBERON:0001703,1.84e-23,2;UBERON:0010323,1.84e-23,2;UBERON:0003129,1.84e-23,2;UBERON:0003069,1.84e-23,2;UBERON:0003051,1.84e-23,2;UBERON:0004637,1.84e-23,2;UBERON:0004761,1.84e-23,2;UBERON:0010113,1.84e-23,2;UBERON:0009123,1.84e-23,2;UBERON:0010351,1.84e-23,2;UBERON:0009617,1.84e-23,2;UBERON:0005641,1.84e-23,2;UBERON:0010349,1.84e-23,2;UBERON:0002038,2.04e-15,3;UBERON:0009663,2.04e-15,3;UBERON:0009661,2.04e-15,3;UBERON:0000125,2.04e-15,3;UBERON:0002308,2.04e-15,3;UBERON:0001153,2.01e-12,1;UBERON:0001045,2.01e-12,1;UBERON:0002950,8.11e-12,4;UBERON:0001891,8.11e-12,4;UBERON:0009616,8.11e-12,4;UBERON:0010286,8.11e-12,4;UBERON:0000075,1.75e-08,6;UBERON:0005856,1.75e-08,6;UBERON:0005866,1.75e-08,6;UBERON:0005863,1.75e-08,6;UBERON:0000058,2.13e-07,7;UBERON:0001155,7.59e-07,2;UBERON:0000059,7.59e-07,2|phase1_expression=28.6666436317581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0.255374676170375,1.0752457327937,0.263772575460388,0.274462930807229,0,0.837548997004143,1.12552522006336,1.37518422999129,1.17851434189467,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,17.6054274720851,0,0,0,0,0,0,0,0,0,0,0,0,0.452167921657868,0,0.251333182659351,0,0,0,0,0,0,1.86391761218122,0.292780797011547,0.209446706813455,0,0,0,0,0.748953197024114,0.457500602818626,0.125654352112864,0,0,0,0.324482526135515,0,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.937693492737625,0,0,0.94652465824877,0,0.215423397732799,0,0,0.283076530788832,0,0.876767573733936,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0,0,0,0|short_description=p3@Lhfpl5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:328789 | |||
|HGNC= | |||
|MCL_coexpression_id=47 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q8H7,uniprot:Q4KL25,uniprot:B2RWL4 | |||
|association_with_transcript=62bp_to_ENSMUST00000163218,NM_026571,uc008brg.2,uc012aoh.1_5end | |||
|cluster_id=chr17:28712726..28712748,+ | |||
|description=CAGE_peak_3_at_Lhfpl5_5end | |||
|id=chr17:28712726..28712748,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.05e-10!33;CL:0000047!1.05e-10!33;CL:0000031!1.05e-10!33;CL:0000404!1.05e-10!33;CL:0000393!3.05e-08!39;CL:0000211!3.05e-08!39;CL:0000221!8.08e-08!44;CL:0000133!8.08e-08!44;CL:0000117!4.56e-07!23;CL:0000337!4.56e-07!23;CL:0002319!5.25e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.84e-23,2;CL:0002491,1.84e-23,2;CL:0000098,1.84e-23,2;CL:0002614,2.04e-15,3;CL:0002374,1.20e-12,1;CL:0000202,1.20e-12,1;CL:0000199,1.20e-12,1;CL:0000855,1.20e-12,1;CL:0000589,1.20e-12,1;CL:0000710,1.55e-12,1;CL:0002077,1.55e-12,1;CL:0005014,1.55e-12,1;CL:0002315,1.55e-12,1;CL:0002490,1.55e-12,1;CL:0000221,5.01e-09,44;CL:0000133,5.01e-09,44;CL:0000540,1.83e-08,33;CL:0000047,1.83e-08,33;CL:0000031,1.83e-08,33;CL:0000404,1.83e-08,33;CL:0000117,6.58e-08,23;CL:0000337,6.58e-08,23;CL:0000393,3.49e-07,39;CL:0000211,3.49e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.29e-15!71;UBERON:0003075!5.29e-15!71;UBERON:0007284!5.29e-15!71;UBERON:0004121!7.19e-14!102;UBERON:0000924!7.19e-14!102;UBERON:0006601!7.19e-14!102;UBERON:0001017!3.92e-12!73;UBERON:0005743!3.92e-12!73;UBERON:0000073!1.47e-11!75;UBERON:0001016!1.47e-11!75;UBERON:0003076!5.42e-11!12;UBERON:0003057!5.42e-11!12;UBERON:0000033!7.80e-11!63;UBERON:0001049!9.48e-10!52;UBERON:0005068!9.48e-10!52;UBERON:0006241!9.48e-10!52;UBERON:0007135!9.48e-10!52;UBERON:0002298!1.80e-09!6;UBERON:0002240!2.84e-09!6;UBERON:0005174!2.84e-09!6;UBERON:0001137!2.84e-09!6;UBERON:0002420!3.06e-08!8;UBERON:0007245!3.06e-08!8;UBERON:0010009!3.06e-08!8;UBERON:0010011!3.06e-08!8;UBERON:0000454!3.06e-08!8;UBERON:0001948!4.66e-08!5;UBERON:0002315!4.66e-08!5;UBERON:0000020!2.22e-07!12;UBERON:0001032!2.22e-07!12;UBERON:0004456!2.22e-07!12;UBERON:0002950!5.13e-07!4;UBERON:0001891!5.13e-07!4;UBERON:0009616!5.13e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004766,1.84e-23,2;UBERON:0008193,1.84e-23,2;UBERON:0005913,1.84e-23,2;UBERON:0011158,1.84e-23,2;UBERON:0005744,1.84e-23,2;UBERON:0003457,1.84e-23,2;UBERON:0008001,1.84e-23,2;UBERON:0007497,1.84e-23,2;UBERON:0009955,1.84e-23,2;UBERON:0003067,1.84e-23,2;UBERON:0002546,1.84e-23,2;UBERON:0007914,1.84e-23,2;UBERON:0005253,1.84e-23,2;UBERON:0002227,1.84e-23,2;UBERON:0001846,1.84e-23,2;UBERON:0004339,1.84e-23,2;UBERON:0002105,1.84e-23,2;UBERON:0001678,1.84e-23,2;UBERON:0003128,1.84e-23,2;UBERON:0001694,1.84e-23,2;UBERON:0004681,1.84e-23,2;UBERON:0001839,1.84e-23,2;UBERON:0001690,1.84e-23,2;UBERON:0001844,1.84e-23,2;UBERON:0001849,1.84e-23,2;UBERON:0002499,1.84e-23,2;UBERON:0001855,1.84e-23,2;UBERON:0011137,1.84e-23,2;UBERON:0001703,1.84e-23,2;UBERON:0010323,1.84e-23,2;UBERON:0003129,1.84e-23,2;UBERON:0003069,1.84e-23,2;UBERON:0003051,1.84e-23,2;UBERON:0004637,1.84e-23,2;UBERON:0004761,1.84e-23,2;UBERON:0010113,1.84e-23,2;UBERON:0009123,1.84e-23,2;UBERON:0010351,1.84e-23,2;UBERON:0009617,1.84e-23,2;UBERON:0005641,1.84e-23,2;UBERON:0010349,1.84e-23,2;UBERON:0002038,2.04e-15,3;UBERON:0009663,2.04e-15,3;UBERON:0009661,2.04e-15,3;UBERON:0000125,2.04e-15,3;UBERON:0002308,2.04e-15,3;UBERON:0001153,2.01e-12,1;UBERON:0001045,2.01e-12,1;UBERON:0002950,8.11e-12,4;UBERON:0001891,8.11e-12,4;UBERON:0009616,8.11e-12,4;UBERON:0010286,8.11e-12,4;UBERON:0000075,1.75e-08,6;UBERON:0005856,1.75e-08,6;UBERON:0005866,1.75e-08,6;UBERON:0005863,1.75e-08,6;UBERON:0000058,2.13e-07,7;UBERON:0001155,7.59e-07,2;UBERON:0000059,7.59e-07,2 | |||
|phase1_expression=28.6666436317581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0.255374676170375,1.0752457327937,0.263772575460388,0.274462930807229,0,0.837548997004143,1.12552522006336,1.37518422999129,1.17851434189467,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,17.6054274720851,0,0,0,0,0,0,0,0,0,0,0,0,0.452167921657868,0,0.251333182659351,0,0,0,0,0,0,1.86391761218122,0.292780797011547,0.209446706813455,0,0,0,0,0.748953197024114,0.457500602818626,0.125654352112864,0,0,0,0.324482526135515,0,0,0,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.384341160854549,0.187403449119458,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.321101179975584,0.937693492737625,0,0,0.94652465824877,0,0.215423397732799,0,0,0.283076530788832,0,0.876767573733936,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p3@Lhfpl5 | |||
}} |
Revision as of 13:17, 4 August 2015
Short description: | p3@Lhfpl5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lhfpl5_5end |
Coexpression cluster: | MCL_coexpression_mm9:47 |
Association with transcript: | 62bp_to_ENSMUST00000163218, NM_026571, uc008brg.2, uc012aoh.1_5end |
EntrezGene: | 328789 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.84e-23 | 2 |
auditory epithelial cell | 1.84e-23 | 2 |
sensory epithelial cell | 1.84e-23 | 2 |
neuron of the substantia nigra | 2.04e-15 | 3 |
ear hair cell | 1.20e-12 | 1 |
auditory hair cell | 1.20e-12 | 1 |
mechanoreceptor cell | 1.20e-12 | 1 |
sensory hair cell | 1.20e-12 | 1 |
cochlear inner hair cell | 1.20e-12 | 1 |
neurecto-epithelial cell | 1.55e-12 | 1 |
ecto-epithelial cell | 1.55e-12 | 1 |
auditory epithelial support cell | 1.55e-12 | 1 |
supporting cell of cochlea | 1.55e-12 | 1 |
organ of Corti supporting cell | 1.55e-12 | 1 |
ectodermal cell | 5.01e-09 | 44 |
neurectodermal cell | 5.01e-09 | 44 |
neuron | 1.83e-08 | 33 |
neuronal stem cell | 1.83e-08 | 33 |
neuroblast | 1.83e-08 | 33 |
electrically signaling cell | 1.83e-08 | 33 |
CNS neuron (sensu Vertebrata) | 6.58e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.58e-08 | 23 |
electrically responsive cell | 3.49e-07 | 39 |
electrically active cell | 3.49e-07 | 39 |