FFCP PHASE1:Hg19::chr17:36105042..36105060,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6928|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11630|TSSclassifier=S|UniProt=F5H7Y3|association_with_transcript=0bp_to_ENST00000539087,ENST00000561193_5end|coexpression_cluster_id=C2401|description=CAGE_peak_1_at_HNF1B_5end|id=chr17:36105042..36105060,-|ontology_enrichment_celltype=CL:1000497!1.43e-21!18;CL:0002518!1.43e-21!18;CL:1000449!6.96e-19!16;CL:0002681!9.39e-15!13;CL:0002584!9.39e-15!13;CL:1000507!2.66e-14!12;CL:1000494!2.66e-14!12;CL:0000066!2.11e-12!254;CL:1000612!1.42e-09!7;CL:1000746!1.42e-09!7;CL:0000223!6.63e-08!59|ontology_enrichment_celltype_v019=CL:1000497;4.07e-30;17!CL:0002518;4.07e-30;17!CL:1000449;3.53e-26;15!CL:1000507;1.22e-21;10!CL:1000494;1.22e-21;10!CL:0002681;4.03e-20;12!CL:0002584;4.03e-20;12!CL:1000746;1.78e-10;7!CL:1000612;1.78e-10;7!CL:0000239;1.32e-07;3!CL:1000615;1.32e-07;3!CL:0002306;1.32e-07;3|ontology_enrichment_celltype_v019_2=CL:1000497,4.72e-30,17;CL:0002518,4.72e-30,17;CL:1000449,4.09e-26,15;CL:1000507,1.22e-21,10;CL:1000494,1.22e-21,10;CL:0002681,4.63e-20,12;CL:0002584,4.63e-20,12;CL:0000066,1.53e-13,253;CL:1000746,2.02e-10,7;CL:1000612,2.02e-10,7;CL:0000223,3.84e-08,58;CL:0000239,1.32e-07,3;CL:1000615,1.32e-07,3;CL:0002306,1.32e-07,3|ontology_enrichment_development_v019=UBERON:0009497;8.26e-11;13!UBERON:0003104;1.45e-09;31!UBERON:0001041;5.14e-08;30!UBERON:0004161;6.05e-08;11!UBERON:0008947;1.29e-07;29!UBERON:0006595;1.67e-07;86!UBERON:0003918;3.97e-07;10!UBERON:0007687;3.97e-07;10|ontology_enrichment_disease=DOID:299!1.23e-10!25;DOID:305!2.79e-10!106|ontology_enrichment_disease_v019=DOID:299;4.21e-11;25|ontology_enrichment_disease_v019_2=DOID:299,4.01e-11,25;DOID:305,9.25e-11,106|ontology_enrichment_uberon=UBERON:0001008!4.06e-29!45;UBERON:0006554!3.48e-28!44;UBERON:0005172!2.02e-26!55;UBERON:0005173!2.02e-26!55;UBERON:0002113!4.79e-24!27;UBERON:0003918!4.79e-24!27;UBERON:0005095!4.79e-24!27;UBERON:0007687!4.79e-24!27;UBERON:0000058!6.67e-23!26;UBERON:0002417!1.63e-22!61;UBERON:0000916!1.63e-22!61;UBERON:0000080!3.02e-21!18;UBERON:0002120!3.02e-21!18;UBERON:0004875!3.02e-21!18;UBERON:0005721!3.02e-21!18;UBERON:0005754!3.02e-21!18;UBERON:0007297!3.02e-21!18;UBERON:0000489!1.13e-20!32;UBERON:0006555!3.86e-20!17;UBERON:0005103!3.86e-20!17;UBERON:0000083!3.86e-20!17;UBERON:0009201!3.86e-20!17;UBERON:0004819!3.86e-20!17;UBERON:0006553!3.86e-20!17;UBERON:0003074!3.86e-20!17;UBERON:0003060!3.86e-20!17;UBERON:0003887!3.54e-19!21;UBERON:0004211!6.96e-19!16;UBERON:0001285!6.96e-19!16;UBERON:0007684!6.96e-19!16;UBERON:0003220!6.96e-19!16;UBERON:0004208!6.96e-19!16;UBERON:0004876!1.65e-18!20;UBERON:0003064!1.92e-17!37;UBERON:0005177!1.31e-16!107;UBERON:0004119!3.24e-16!169;UBERON:0000925!3.24e-16!169;UBERON:0006595!3.24e-16!169;UBERON:0004921!2.74e-15!129;UBERON:0004185!2.74e-15!129;UBERON:0001225!9.39e-15!13;UBERON:0008987!9.39e-15!13;UBERON:0009773!2.66e-14!12;UBERON:0001231!2.66e-14!12;UBERON:0004810!2.66e-14!12;UBERON:0000466!5.02e-14!126;UBERON:0000077!5.08e-13!130;UBERON:0009569!2.80e-12!113;UBERON:0001007!4.72e-12!155;UBERON:0001555!4.72e-12!155;UBERON:0007026!4.72e-12!155;UBERON:0000353!4.76e-12!17;UBERON:0003104!1.32e-11!238;UBERON:0009142!1.32e-11!238;UBERON:0003886!1.63e-11!63;UBERON:0001851!2.85e-11!16;UBERON:0009497!4.44e-11!25;UBERON:0000015!4.44e-11!25;UBERON:0002423!4.44e-11!25;UBERON:0006235!4.44e-11!25;UBERON:0004161!4.44e-11!25;UBERON:0005911!5.29e-11!82;UBERON:0009856!7.58e-11!26;UBERON:0001737!6.29e-10!9;UBERON:0007499!6.73e-10!25;UBERON:0009854!1.20e-09!23;UBERON:0000074!1.42e-09!7;UBERON:0001229!1.42e-09!7;UBERON:0001230!1.42e-09!7;UBERON:0005749!1.42e-09!7;UBERON:0004199!1.42e-09!7;UBERON:0004209!1.42e-09!7;UBERON:0004198!1.42e-09!7;UBERON:0002553!1.80e-09!70;UBERON:0003929!5.67e-09!54;UBERON:0008835!1.05e-08!22;UBERON:0003894!1.05e-08!22;UBERON:0001041!3.58e-08!98;UBERON:0000464!4.05e-08!104;UBERON:0000062!1.38e-07!511;UBERON:0000926!2.40e-07!448;UBERON:0004120!2.40e-07!448;UBERON:0006603!2.40e-07!448;UBERON:0005409!4.13e-07!35;UBERON:0000481!9.34e-07!347|ontology_enrichment_uberon_v019=UBERON:0006554;3.53e-29;30!UBERON:0001008;3.53e-29;30!UBERON:0002113;1.47e-28;24!UBERON:0011143;1.47e-28;24!UBERON:0006555;3.53e-26;15!UBERON:0004819;3.53e-26;15!UBERON:0001285;3.53e-26;15!UBERON:0007684;3.53e-26;15!UBERON:0000489;1.37e-22;29!UBERON:0004211;1.22e-21;10!UBERON:0009773;1.22e-21;10!UBERON:0001231;1.22e-21;10!UBERON:0004810;1.22e-21;10!UBERON:0001225;4.03e-20;12!UBERON:0008987;4.03e-20;12!UBERON:0005172;1.28e-16;52!UBERON:0005173;1.28e-16;52!UBERON:0001851;1.68e-15;15!UBERON:0000353;1.68e-15;15!UBERON:0005409;8.35e-14;22!UBERON:0002417;3.82e-13;58!UBERON:0000916;3.82e-13;58!UBERON:0000160;2.02e-11;17!UBERON:0001737;5.35e-11;9!UBERON:0001557;5.35e-11;9!UBERON:0000074;1.78e-10;7!UBERON:0001229;1.78e-10;7!UBERON:0002423;4.43e-10;25!UBERON:0000058;7.06e-09;10!UBERON:0004921;8.79e-08;33!UBERON:0006853;1.32e-07;3!UBERON:0007685;1.32e-07;3!UBERON:0004134;1.32e-07;3!UBERON:0005177;1.70e-07;99!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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6928 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11630 | |||
|TSSclassifier=S | |||
|UniProt=F5H7Y3 | |||
|association_with_transcript=0bp_to_ENST00000539087,ENST00000561193_5end | |||
|coexpression_cluster_id=C2401 | |||
|description=CAGE_peak_1_at_HNF1B_5end | |||
|id=chr17:36105042..36105060,- | |||
|ontology_enrichment_celltype=CL:1000497!1.43e-21!18;CL:0002518!1.43e-21!18;CL:1000449!6.96e-19!16;CL:0002681!9.39e-15!13;CL:0002584!9.39e-15!13;CL:1000507!2.66e-14!12;CL:1000494!2.66e-14!12;CL:0000066!2.11e-12!254;CL:1000612!1.42e-09!7;CL:1000746!1.42e-09!7;CL:0000223!6.63e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:1000497;4.07e-30;17!CL:0002518;4.07e-30;17!CL:1000449;3.53e-26;15!CL:1000507;1.22e-21;10!CL:1000494;1.22e-21;10!CL:0002681;4.03e-20;12!CL:0002584;4.03e-20;12!CL:1000746;1.78e-10;7!CL:1000612;1.78e-10;7!CL:0000239;1.32e-07;3!CL:1000615;1.32e-07;3!CL:0002306;1.32e-07;3 | |||
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|ontology_enrichment_disease=DOID:299!1.23e-10!25;DOID:305!2.79e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:299;4.21e-11;25 | |||
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|short_description=p1@HNF1B | |||
}} |
Revision as of 13:10, 11 September 2013
Short description: | p1@HNF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HNF1B_5end |
Coexpression cluster: | C2401_serous_Renal_renal_signet_mesothelioma_kidney_clear |
Association with transcript: | 0bp_to_ENST00000539087, ENST00000561193_5end |
EntrezGene: | HNF1B |
HGNC: | 11630 |
UniProt: | F5H7Y3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 4.72e-30 | 17 |
kidney epithelial cell | 4.72e-30 | 17 |
epithelial cell of nephron | 4.09e-26 | 15 |
kidney tubule cell | 1.22e-21 | 10 |
nephron tubule epithelial cell | 1.22e-21 | 10 |
kidney cortical cell | 4.63e-20 | 12 |
renal cortical epithelial cell | 4.63e-20 | 12 |
epithelial cell | 1.53e-13 | 253 |
glomerular cell | 2.02e-10 | 7 |
kidney corpuscule cell | 2.02e-10 | 7 |
endodermal cell | 3.84e-08 | 58 |
brush border epithelial cell | 1.32e-07 | 3 |
kidney cortex tubule cell | 1.32e-07 | 3 |
epithelial cell of proximal tubule | 1.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 4.01e-11 | 25 |
carcinoma | 9.25e-11 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.