FFCP PHASE1:Hg19::chr12:52911768..52911778,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3852 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6442 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-32bp_to_ENST00000547890_5end | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_9_at_KRT5_5end | |||
|id=chr12:52911768..52911778,- | |||
|ontology_enrichment_celltype=CL:0002076!1.74e-26!43;CL:0000223!4.66e-19!59;CL:0002368!2.33e-18!13;CL:0002159!5.58e-18!13;CL:0002251!2.52e-13!21;CL:0000066!7.24e-13!254;CL:0000622!2.26e-12!5;CL:0000244!1.56e-10!4;CL:0000731!1.56e-10!4;CL:0002202!2.96e-10!9;CL:0002632!2.96e-10!9;CL:0000154!3.12e-10!6;CL:0002328!8.24e-09!3;CL:0000068!9.58e-09!3;CL:0000069!9.58e-09!3;CL:0000307!9.58e-09!3;CL:0000377!9.58e-09!3;CL:0000362!4.85e-08!8;CL:0002623!6.39e-08!3;CL:0002166!8.47e-08!3;CL:0000076!1.00e-07!62;CL:0000240!2.60e-07!6;CL:0000311!2.60e-07!6;CL:0000079!2.60e-07!6;CL:0000237!2.60e-07!6;CL:0000036!2.60e-07!6;CL:0000357!2.60e-07!6;CL:0000114!2.60e-07!6;CL:0002621!2.67e-07!3;CL:0002077!6.29e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.37e-45;13!CL:0002076;1.08e-25;42!CL:0002202;1.32e-24;9!CL:0002632;1.32e-24;9!CL:0002159;5.02e-21;14!CL:0002328;1.48e-19;3!CL:0000307;2.21e-19;3!CL:0000362;5.30e-17;9!CL:0000240;7.86e-17;6!CL:0000311;7.86e-17;6!CL:0000079;7.86e-17;6!CL:0000237;7.86e-17;6!CL:0000575;6.25e-14;2!CL:0000317;4.89e-13;2!CL:1000448;4.89e-13;2!CL:0002308;4.89e-13;2!CL:0002140;4.89e-13;2!CL:0000312;6.82e-12;5!CL:0000622;2.52e-11;5!CL:0000154;1.61e-09;6!CL:0002231;6.60e-09;3!CL:0002077;5.88e-08;34!CL:0002252;1.25e-07;1!CL:0002336;2.07e-07;1!CL:0002261;2.07e-07;1!CL:0002170;2.07e-07;1!CL:0000244;2.46e-07;4!CL:0000731;2.46e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.71e-45,13;CL:0002076,1.15e-33,42;CL:0002202,1.19e-24,9;CL:0002632,1.19e-24,9;CL:0000223,1.81e-23,58;CL:0002159,6.50e-21,14;CL:0002328,1.39e-19,3;CL:0000068,2.02e-19,3;CL:0000069,2.02e-19,3;CL:0000307,2.02e-19,3;CL:0000377,2.02e-19,3;CL:0000362,6.81e-17,9;CL:0000240,7.71e-17,6;CL:0000311,7.71e-17,6;CL:0000079,7.71e-17,6;CL:0000237,7.71e-17,6;CL:0000036,7.71e-17,6;CL:0000357,7.71e-17,6;CL:0000114,7.71e-17,6;CL:0000575,6.67e-14,2;CL:0000317,7.05e-13,2;CL:1000448,7.05e-13,2;CL:0002308,7.05e-13,2;CL:0002140,7.05e-13,2;CL:0000066,1.77e-12,253;CL:0000312,7.21e-12,5;CL:0000622,3.18e-11,5;CL:0000154,1.95e-09,6;CL:0002231,5.97e-09,3;CL:0002321,3.80e-08,250;CL:0002077,4.25e-08,34;CL:0002252,1.18e-07,1;CL:0002336,1.83e-07,1;CL:0002261,1.83e-07,1;CL:0002170,1.83e-07,1;CL:0000244,2.28e-07,4;CL:0000731,2.28e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;2.21e-19;3!CL:0000357;7.86e-17;6!CL:0000114;7.86e-17;6!CL:0000223;8.19e-14;58!UBERON:0009143;3.51e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!7.40e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.07e-07;1!DOID:3149;2.07e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.07e-07,1;DOID:3149,2.07e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!6.60e-14!72;UBERON:0000924!1.70e-13!173;UBERON:0006601!1.70e-13!173;UBERON:0000166!3.09e-13!21;UBERON:0004121!3.14e-13!169;UBERON:0000153!2.39e-12!129;UBERON:0007811!2.39e-12!129;UBERON:0000165!4.33e-11!28;UBERON:0000930!4.33e-11!28;UBERON:0000033!1.16e-10!123;UBERON:0004119!3.81e-10!169;UBERON:0000925!3.81e-10!169;UBERON:0006595!3.81e-10!169;UBERON:0000161!8.61e-10!35;UBERON:0004815!8.24e-09!3;UBERON:0002031!8.24e-09!3;UBERON:0000064!1.13e-08!219;UBERON:0000365!2.09e-08!5;UBERON:0003102!2.27e-08!95;UBERON:0007196!4.07e-08!14;UBERON:0001558!4.07e-08!14;UBERON:0000065!7.73e-08!53;UBERON:0003729!1.06e-07!5;UBERON:0001444!1.68e-07!48;UBERON:0001949!2.67e-07!3;UBERON:0000974!2.87e-07!10;UBERON:0005910!5.54e-07!6;UBERON:0006562!9.93e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.48e-19;3!UBERON:0002031;1.48e-19;3!UBERON:0007196;1.48e-14;15!UBERON:0001558;1.48e-14;15!UBERON:0001003;3.53e-14;15!UBERON:0007376;3.53e-14;15!UBERON:0002419;4.89e-13;2!UBERON:0007771;4.89e-13;2!UBERON:0003297;4.89e-13;2!UBERON:0001821;4.89e-13;2!UBERON:0003487;4.89e-13;2!UBERON:0001820;4.89e-13;2!UBERON:0002185;6.00e-12;5!UBERON:0005178;1.64e-10;34!UBERON:0002224;1.64e-10;34!UBERON:0005181;6.90e-10;35!UBERON:0000065;2.91e-09;44!UBERON:0001043;4.78e-09;3!UBERON:0000485;1.15e-08;7!UBERON:0003126;1.36e-08;7!UBERON:0001005;1.36e-08;7!UBERON:0000964;2.21e-07;4!UBERON:0010409;2.21e-07;4!UBERON:0007029;3.51e-07;1!UBERON:0003102;4.11e-07;50!UBERON:0000014;6.95e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.39e-19,3;UBERON:0002031,1.39e-19,3;UBERON:0007196,1.40e-14,15;UBERON:0001558,1.40e-14,15;UBERON:0001003,4.36e-14,15;UBERON:0007376,4.36e-14,15;UBERON:0007383,4.36e-14,15;UBERON:0002419,7.05e-13,2;UBERON:0007771,7.05e-13,2;UBERON:0003297,7.05e-13,2;UBERON:0001821,7.05e-13,2;UBERON:0003487,7.05e-13,2;UBERON:0001820,7.05e-13,2;UBERON:0005089,7.05e-13,2;UBERON:0005088,7.05e-13,2;UBERON:0004119,2.48e-12,160;UBERON:0000925,2.48e-12,160;UBERON:0006595,2.48e-12,160;UBERON:0002185,5.78e-12,5;UBERON:0000065,1.18e-11,54;UBERON:0001004,2.57e-11,74;UBERON:0003102,9.25e-11,99;UBERON:0005178,1.56e-10,34;UBERON:0002224,1.56e-10,34;UBERON:0005181,3.37e-10,35;UBERON:0001043,5.08e-09,3;UBERON:0009143,5.08e-09,3;UBERON:0003126,1.31e-08,7;UBERON:0001005,1.31e-08,7;UBERON:0005157,2.27e-07,47;UBERON:0000964,2.28e-07,4;UBERON:0010409,2.28e-07,4;UBERON:0004348,2.28e-07,4;UBERON:0005427,2.28e-07,4;UBERON:0007029,3.84e-07,1;UBERON:0000014,7.27e-07,4;UBERON:0000485,7.69e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59710612239464,6.6265302131215,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46442932438813,11.8651021691017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.79703457356788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29250856225877,5.62008766288098,4.12168786887686,2.77765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.708875486211932,0.895585227028483,0.871901815541886,7.66765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6065841139427,1.84161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,3.25030123018261,0,0,0,0,0,0,0,0,0,1.65284915360978,1.53752053892085,1.02090169995667,2.6301023022443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82822014178473,6.03272047982209,6.53345909167936,0,0.86101074534246,6.73885902670502,5.76459199597678,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0.921482106297696,0,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,1.95193241990045,0.384751292518985,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,1.26085721434945,0,0.451961481561065,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,2.68347750079413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.138314504928436,0,0,0.196295437002051,0.11796972334774,2.75142897782519,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.443910671357348,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0.828864656652147,1.53646629384555,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.193766729508018,0.124149428591716,0,0,0,3.70118471424834,0.684466602170562,0.26940821205835,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p9@KRT5 | |||
}} |
Revision as of 13:37, 11 January 2014
Short description: | p9@KRT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KRT5_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | -32bp_to_ENST00000547890_5end |
EntrezGene: | KRT5 |
HGNC: | 6442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.07e-07 | 1 |
keratoacanthoma | 2.07e-07 | 1 |