FFCP PHASE1:Hg19::chr2:177053683..177053697,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401022 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000413969,NR_033979_5end | |||
|description=CAGE_peak_1_at_LOC401022_5end | |||
|id=chr2:177053683..177053697,- | |||
|ontology_enrichment_celltype=CL:1000507!5.39e-13!12;CL:1000494!5.39e-13!12;CL:1000449!7.81e-13!16;CL:0002139!2.56e-12!24;CL:0002078!3.81e-11!44;CL:1000497!6.39e-11!18;CL:0002518!6.39e-11!18;CL:0000115!2.59e-10!35;CL:0002681!1.99e-09!13;CL:0002584!1.99e-09!13;CL:0005020!1.97e-08!6;CL:0002138!1.97e-08!6;CL:0005022!1.97e-08!6;CL:0000066!6.24e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.33e-38;10!CL:1000494;5.33e-38;10!CL:1000449;1.66e-31;15!CL:1000497;1.24e-27;17!CL:0002518;1.24e-27;17!CL:0002681;3.05e-24;12!CL:0002584;3.05e-24;12!CL:0002138;2.57e-16;6!CL:0000650;4.57e-13;2!CL:1000500;4.57e-13;2!CL:1000618;4.57e-13;2!CL:1001318;4.57e-13;2!CL:0002173;4.57e-13;2!CL:0002139;7.27e-12;24!CL:0000239;2.80e-09;3!CL:1000615;2.80e-09;3!CL:0002306;2.80e-09;3!CL:0000115;3.30e-09;36!CL:0002078;1.59e-08;45!CL:1000746;2.57e-08;7!CL:1000612;2.57e-08;7!CL:0000669;5.88e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.31e-38,10;CL:1000494,1.31e-38,10;CL:1000449,4.80e-32,15;CL:1000497,4.17e-28,17;CL:0002518,4.17e-28,17;CL:0002681,1.60e-24,12;CL:0002584,1.60e-24,12;CL:0005020,1.81e-16,6;CL:0002138,1.81e-16,6;CL:0005022,1.81e-16,6;CL:0000650,2.06e-13,2;CL:1000500,2.06e-13,2;CL:1000618,2.06e-13,2;CL:1001318,2.06e-13,2;CL:0002173,2.06e-13,2;CL:0002078,4.06e-12,45;CL:0002139,6.17e-12,24;CL:0000115,6.23e-10,36;CL:0000239,2.15e-09,3;CL:1000615,2.15e-09,3;CL:0002306,2.15e-09,3;CL:1000746,1.61e-08,7;CL:1000612,1.61e-08,7;CL:0000066,3.54e-08,253;CL:0000669,3.97e-07,4 | |||
|ontology_enrichment_development_v019=CL:0005022;2.57e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000080!5.21e-15!18;UBERON:0002120!5.21e-15!18;UBERON:0004875!5.21e-15!18;UBERON:0005721!5.21e-15!18;UBERON:0005754!5.21e-15!18;UBERON:0007297!5.21e-15!18;UBERON:0006555!4.99e-14!17;UBERON:0005103!4.99e-14!17;UBERON:0000083!4.99e-14!17;UBERON:0009201!4.99e-14!17;UBERON:0004819!4.99e-14!17;UBERON:0006553!4.99e-14!17;UBERON:0003074!4.99e-14!17;UBERON:0003060!4.99e-14!17;UBERON:0000489!1.59e-13!32;UBERON:0003887!1.90e-13!21;UBERON:0001008!4.29e-13!45;UBERON:0009773!5.39e-13!12;UBERON:0001231!5.39e-13!12;UBERON:0004810!5.39e-13!12;UBERON:0004876!5.59e-13!20;UBERON:0004211!7.81e-13!16;UBERON:0001285!7.81e-13!16;UBERON:0007684!7.81e-13!16;UBERON:0003220!7.81e-13!16;UBERON:0004208!7.81e-13!16;UBERON:0002113!1.51e-12!27;UBERON:0003918!1.51e-12!27;UBERON:0005095!1.51e-12!27;UBERON:0007687!1.51e-12!27;UBERON:0006554!2.80e-12!44;UBERON:0000058!1.20e-11!26;UBERON:0003064!2.44e-10!37;UBERON:0001225!1.99e-09!13;UBERON:0008987!1.99e-09!13;UBERON:0001851!1.76e-08!16;UBERON:0000353!5.06e-08!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.33e-38;10!UBERON:0009773;5.33e-38;10!UBERON:0001231;5.33e-38;10!UBERON:0004810;5.33e-38;10!UBERON:0006555;1.66e-31;15!UBERON:0004819;1.66e-31;15!UBERON:0001285;1.66e-31;15!UBERON:0007684;1.66e-31;15!UBERON:0002113;1.25e-28;24!UBERON:0011143;1.25e-28;24!UBERON:0006554;7.63e-27;30!UBERON:0001008;7.63e-27;30!UBERON:0001225;3.05e-24;12!UBERON:0008987;3.05e-24;12!UBERON:0000489;2.41e-23;29!UBERON:0001851;3.13e-19;15!UBERON:0000353;3.13e-19;15!UBERON:0003567;4.57e-13;2!UBERON:0003838;4.57e-13;2!UBERON:0003586;4.57e-13;2!UBERON:0005169;4.57e-13;2!UBERON:0002321;4.57e-13;2!UBERON:0005215;4.57e-13;2!UBERON:0002303;4.57e-13;2!UBERON:0002319;4.57e-13;2!UBERON:0001473;2.78e-12;8!UBERON:0004536;2.78e-12;8!UBERON:0006558;2.78e-12;8!UBERON:0002465;7.46e-10;10!UBERON:0005172;2.68e-09;52!UBERON:0005173;2.68e-09;52!UBERON:0006853;2.80e-09;3!UBERON:0007685;2.80e-09;3!UBERON:0004134;2.80e-09;3!UBERON:0006947;5.27e-09;3!UBERON:0004054;5.27e-09;3!UBERON:0000074;2.57e-08;7!UBERON:0001229;2.57e-08;7!UBERON:0001000;2.27e-07;1!UBERON:0001301;2.27e-07;1!UBERON:0005352;2.27e-07;1!UBERON:0005904;5.88e-07;4!UBERON:0003891;5.88e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.31e-38,10;UBERON:0006555,5.31e-37,16;UBERON:0004819,5.31e-37,16;UBERON:0004211,4.80e-32,15;UBERON:0009773,4.80e-32,15;UBERON:0001231,4.80e-32,15;UBERON:0001285,4.80e-32,15;UBERON:0007684,4.80e-32,15;UBERON:0004208,4.80e-32,15;UBERON:0002113,1.32e-31,26;UBERON:0003918,1.32e-31,26;UBERON:0011143,1.32e-31,26;UBERON:0005095,1.32e-31,26;UBERON:0007687,1.32e-31,26;UBERON:0000489,3.88e-26,31;UBERON:0001225,1.60e-24,12;UBERON:0008987,1.60e-24,12;UBERON:0001851,1.88e-19,15;UBERON:0000353,1.88e-19,15;UBERON:0006554,2.21e-19,47;UBERON:0001008,6.35e-19,48;UBERON:0005172,5.09e-14,54;UBERON:0005173,5.09e-14,54;UBERON:0003567,2.06e-13,2;UBERON:0003838,2.06e-13,2;UBERON:0003586,2.06e-13,2;UBERON:0005169,2.06e-13,2;UBERON:0002321,2.06e-13,2;UBERON:0005215,2.06e-13,2;UBERON:0002303,2.06e-13,2;UBERON:0002319,2.06e-13,2;UBERON:0005103,1.29e-12,8;UBERON:0000083,1.29e-12,8;UBERON:0009201,1.29e-12,8;UBERON:0006553,1.29e-12,8;UBERON:0003074,1.29e-12,8;UBERON:0003060,1.29e-12,8;UBERON:0001473,2.14e-12,8;UBERON:0004536,2.14e-12,8;UBERON:0006558,2.14e-12,8;UBERON:0002417,2.18e-12,60;UBERON:0000916,2.18e-12,60;UBERON:0000080,3.14e-11,9;UBERON:0002120,3.14e-11,9;UBERON:0004875,3.14e-11,9;UBERON:0005721,3.14e-11,9;UBERON:0005754,3.14e-11,9;UBERON:0007297,3.14e-11,9;UBERON:0003103,1.16e-10,68;UBERON:0002465,6.07e-10,10;UBERON:0006853,2.15e-09,3;UBERON:0007685,2.15e-09,3;UBERON:0004134,2.15e-09,3;UBERON:0004876,3.30e-09,11;UBERON:0005177,4.83e-09,101;UBERON:0006947,5.51e-09,3;UBERON:0004054,5.51e-09,3;UBERON:0010532,1.61e-08,7;UBERON:0000074,1.61e-08,7;UBERON:0001229,1.61e-08,7;UBERON:0001230,1.61e-08,7;UBERON:0003220,1.61e-08,7;UBERON:0005749,1.61e-08,7;UBERON:0004199,1.61e-08,7;UBERON:0004209,1.61e-08,7;UBERON:0004198,1.61e-08,7;UBERON:0003887,1.90e-08,12;UBERON:0009569,5.82e-08,112;UBERON:0000058,7.10e-08,19;UBERON:0001301,1.42e-07,1;UBERON:0001000,3.84e-07,1;UBERON:0005352,3.84e-07,1;UBERON:0003891,3.97e-07,4;UBERON:0005904,6.07e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,1.29208379584664,1.42306505074684,1.67360306382335,0.402829317109147,0,3.41686880567437,0.367663080345869,3.24056779152704,0.535798369704479,0.44905874525234,0.900891843866578,0,2.84779697870439,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0.211931901159562,0.600182192168805,0,0,0.37223371266318,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,1.38895653772983,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,0,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,2.25599806453706,1.23224539367064,0.784349769176855,1.46139224653261,1.89992932007176,0,0.170093705276516,0.647747748306418,1.54227252690289,1.62567862526312,1.50506932156456,2.54876273045038,0.831076008928724,1.56712328305525,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0.308097234229289,0.307007349452259,0,0,0,0,0.267096106940212,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,1.29151611801369,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0.347249989866585,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0.432777279484182,0,0.176915129006678,0.611030144933625,0,0,0,0.741412462787447,0,0.234264445725339,0,0,0,1.18375320854817,0,0,0.189559738885464,0,0.207376382794494,0,0,0,1.19472429772959,0,0,0.173559738335131,0.391969589657511,0.0870592065804026,1.57254001417827,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0.39961921916426,1.29681375438695,0,1.20116498503375,0,0.248505071130865,0.235694034616795,0,0,0,0,0,0.547621515567972,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,1.02447419488958,1.20645552710496,0.105600336519406,0,1.72723677587501,0,0,0,0,0.864221491201268,0,0,0,0,0.679872549120754,0,0,0.258565912723101,0,0.342173675768659,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.250381861413,0,0.221858103073705,0.496771223531068,0,0,0.151649117541648,0.570930667089935,0,1.87333962322753,0.28984205722165,0.149254802886874,0.233713309847224,1.10961172300523,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.107824811396682,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0.596748666348824,0.150420656698515,0.40341013740704,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.339848664884159,0.131545547125698,0.236387681767936,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,1.14553434272025,0.31020638566432,0,0.335566295393377,0,0,0,0.102662806856247,0,0,1.16969731731053,0,0,0,0,0.301925687133347,0.154348316215889,0.437119121007915,1.41095188908457,0,0.235676547101626,0.392616934229891,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0.157771562193185,0.135982980381829,0,0,0,0,0.432626562123789,0,0,0,0,0,0.18378979906969,0,0.227336094654718,0,0,0.103432995861895,0,0,0,0.0620747142958579,0.224263725161227,0,0.202117188958219,0,0,0,0.0717222053926763,0,0.244209805832924,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p1@LOC401022 | |||
}} |
Revision as of 06:47, 21 January 2014
Short description: | p1@LOC401022 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC401022_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000413969, NR_033979_5end |
EntrezGene: | LOC401022 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.31e-38 | 10 |
nephron tubule epithelial cell | 1.31e-38 | 10 |
epithelial cell of nephron | 4.80e-32 | 15 |
kidney cell | 4.17e-28 | 17 |
kidney epithelial cell | 4.17e-28 | 17 |
kidney cortical cell | 1.60e-24 | 12 |
renal cortical epithelial cell | 1.60e-24 | 12 |
lymphangioblast | 1.81e-16 | 6 |
endothelial cell of lymphatic vessel | 1.81e-16 | 6 |
vascular lymphangioblast | 1.81e-16 | 6 |
mesangial cell | 2.06e-13 | 2 |
kidney interstitial cell | 2.06e-13 | 2 |
juxtaglomerular complex cell | 2.06e-13 | 2 |
renal interstitial pericyte | 2.06e-13 | 2 |
extraglomerular mesangial cell | 2.06e-13 | 2 |
meso-epithelial cell | 4.06e-12 | 45 |
endothelial cell of vascular tree | 6.17e-12 | 24 |
endothelial cell | 6.23e-10 | 36 |
brush border epithelial cell | 2.15e-09 | 3 |
kidney cortex tubule cell | 2.15e-09 | 3 |
epithelial cell of proximal tubule | 2.15e-09 | 3 |
glomerular cell | 1.61e-08 | 7 |
kidney corpuscule cell | 1.61e-08 | 7 |
epithelial cell | 3.54e-08 | 253 |
pericyte cell | 3.97e-07 | 4 |