FFCP PHASE1:Hg19::chr20:49347516..49347535,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:49347516..49347535,- | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr20:49347516..49347535,- | |description=CAGE_peak_at_chr20:49347516..49347535,- | ||
|id=chr20:49347516..49347535,- | |id=chr20:49347516..49347535,- | ||
|ontology_enrichment_celltype=CL:0000066!6.97e-14!254;CL:1000507!9.69e-07!12;CL:1000494!9.69e-07!12 | |ontology_enrichment_celltype=CL:0000066!6.97e-14!254;CL:1000507!9.69e-07!12;CL:1000494!9.69e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000239;4.83e-30;3!CL:1000615;4.83e-30;3!CL:0002306;4.83e-30;3!CL:1000507;2.41e-20;10!CL:1000494;2.41e-20;10!CL:0002681;4.40e-17;12!CL:0002584;4.40e-17;12!CL:1000449;8.20e-14;15!CL:0000650;2.74e-12;2!CL:1000500;2.74e-12;2!CL:1000618;2.74e-12;2!CL:1001318;2.74e-12;2!CL:0002173;2.74e-12;2!CL:1000497;2.86e-12;17!CL:0002518;2.86e-12;17!CL:0002202;8.57e-11;9!CL:0002632;8.57e-11;9!CL:0000307;9.66e-09;3!CL:0002328;1.26e-08;3!CL:0002231;1.26e-08;3!CL:0002368;9.35e-08;13!CL:0000669;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.84e-30,3;CL:1000615,4.84e-30,3;CL:0002306,4.84e-30,3;CL:1000507,2.85e-20,10;CL:1000494,2.85e-20,10;CL:0002681,5.05e-17,12;CL:0002584,5.05e-17,12;CL:1000449,9.15e-14,15;CL:1000497,3.15e-12,17;CL:0002518,3.15e-12,17;CL:0000650,3.62e-12,2;CL:1000500,3.62e-12,2;CL:1000618,3.62e-12,2;CL:1001318,3.62e-12,2;CL:0002173,3.62e-12,2;CL:0002202,7.58e-11,9;CL:0002632,7.58e-11,9;CL:0000068,9.66e-09,3;CL:0000069,9.66e-09,3;CL:0000307,9.66e-09,3;CL:0000377,9.66e-09,3;CL:0002328,1.04e-08,3;CL:0002231,1.21e-08,3;CL:0002368,8.59e-08,13;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;9.66e-09;3 | |||
|ontology_enrichment_disease=DOID:305!4.51e-18!106;DOID:0050687!4.54e-14!143;DOID:299!2.49e-11!25;DOID:7!4.22e-09!39;DOID:162!4.24e-09!235;DOID:14566!1.33e-08!239;DOID:3119!2.80e-08!14 | |ontology_enrichment_disease=DOID:305!4.51e-18!106;DOID:0050687!4.54e-14!143;DOID:299!2.49e-11!25;DOID:7!4.22e-09!39;DOID:162!4.24e-09!235;DOID:14566!1.33e-08!239;DOID:3119!2.80e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.63e-23;4!DOID:1612;2.63e-23;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.63e-23,4;DOID:1612,2.63e-23,4 | |||
|ontology_enrichment_uberon=UBERON:0002113!5.27e-08!27;UBERON:0003918!5.27e-08!27;UBERON:0005095!5.27e-08!27;UBERON:0007687!5.27e-08!27;UBERON:0000344!1.09e-07!12;UBERON:0000489!2.42e-07!32;UBERON:0006554!4.20e-07!44;UBERON:0005172!5.65e-07!55;UBERON:0005173!5.65e-07!55;UBERON:0001008!7.57e-07!45;UBERON:0009773!9.69e-07!12;UBERON:0001231!9.69e-07!12;UBERON:0004810!9.69e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;4.83e-30;3!UBERON:0007685;4.83e-30;3!UBERON:0004134;4.83e-30;3!UBERON:0004211;2.41e-20;10!UBERON:0009773;2.41e-20;10!UBERON:0001231;2.41e-20;10!UBERON:0004810;2.41e-20;10!UBERON:0001225;4.40e-17;12!UBERON:0008987;4.40e-17;12!UBERON:0001851;8.20e-14;15!UBERON:0006555;8.20e-14;15!UBERON:0000353;8.20e-14;15!UBERON:0004819;8.20e-14;15!UBERON:0001285;8.20e-14;15!UBERON:0007684;8.20e-14;15!UBERON:0003567;2.74e-12;2!UBERON:0003838;2.74e-12;2!UBERON:0003586;2.74e-12;2!UBERON:0005169;2.74e-12;2!UBERON:0002321;2.74e-12;2!UBERON:0005215;2.74e-12;2!UBERON:0002303;2.74e-12;2!UBERON:0002319;2.74e-12;2!UBERON:0000310;6.20e-10;10!UBERON:0001443;4.08e-09;11!UBERON:0002113;7.03e-09;24!UBERON:0011143;7.03e-09;24!UBERON:0004815;1.26e-08;3!UBERON:0002031;1.26e-08;3!UBERON:0000489;1.89e-07;29!UBERON:0006554;3.20e-07;30!UBERON:0001008;3.20e-07;30!UBERON:0007196;7.75e-07;15!UBERON:0001558;7.75e-07;15!UBERON:0003891;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,4.84e-30,3;UBERON:0007685,4.84e-30,3;UBERON:0004134,4.84e-30,3;UBERON:0004810,2.85e-20,10;UBERON:0001225,5.05e-17,12;UBERON:0008987,5.05e-17,12;UBERON:0001851,9.15e-14,15;UBERON:0004211,9.15e-14,15;UBERON:0009773,9.15e-14,15;UBERON:0000353,9.15e-14,15;UBERON:0001231,9.15e-14,15;UBERON:0001285,9.15e-14,15;UBERON:0007684,9.15e-14,15;UBERON:0004208,9.15e-14,15;UBERON:0006555,5.99e-13,16;UBERON:0004819,5.99e-13,16;UBERON:0003567,3.62e-12,2;UBERON:0003838,3.62e-12,2;UBERON:0003586,3.62e-12,2;UBERON:0005169,3.62e-12,2;UBERON:0002321,3.62e-12,2;UBERON:0005215,3.62e-12,2;UBERON:0002303,3.62e-12,2;UBERON:0002319,3.62e-12,2;UBERON:0000310,6.20e-10,10;UBERON:0009569,1.56e-09,112;UBERON:0001443,4.08e-09,11;UBERON:0004815,1.04e-08,3;UBERON:0002031,1.04e-08,3;UBERON:0002113,3.24e-08,26;UBERON:0003918,3.24e-08,26;UBERON:0011143,3.24e-08,26;UBERON:0005095,3.24e-08,26;UBERON:0007687,3.24e-08,26;UBERON:0006554,7.82e-08,47;UBERON:0001008,1.12e-07,48;UBERON:0000915,3.07e-07,52;UBERON:0000489,5.52e-07,31;UBERON:0007196,7.20e-07,15;UBERON:0001558,7.20e-07,15;UBERON:0002100,7.51e-07,199 | |||
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| ||
|short_description=p@chr20:49347516..49347535,- | |short_description=p@chr20:49347516..49347535,- | ||
}} | }} |
Latest revision as of 15:15, 28 July 2015
Short description: | p@chr20:49347516..49347535, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:49347516..49347535, - |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.84e-30 | 3 |
kidney cortex tubule cell | 4.84e-30 | 3 |
epithelial cell of proximal tubule | 4.84e-30 | 3 |
kidney tubule cell | 2.85e-20 | 10 |
nephron tubule epithelial cell | 2.85e-20 | 10 |
kidney cortical cell | 5.05e-17 | 12 |
renal cortical epithelial cell | 5.05e-17 | 12 |
epithelial cell of nephron | 9.15e-14 | 15 |
kidney cell | 3.15e-12 | 17 |
kidney epithelial cell | 3.15e-12 | 17 |
mesangial cell | 3.62e-12 | 2 |
kidney interstitial cell | 3.62e-12 | 2 |
juxtaglomerular complex cell | 3.62e-12 | 2 |
renal interstitial pericyte | 3.62e-12 | 2 |
extraglomerular mesangial cell | 3.62e-12 | 2 |
epithelial cell of tracheobronchial tree | 7.58e-11 | 9 |
epithelial cell of lower respiratory tract | 7.58e-11 | 9 |
duct epithelial cell | 9.66e-09 | 3 |
branched duct epithelial cell | 9.66e-09 | 3 |
tracheal epithelial cell | 9.66e-09 | 3 |
tracheoblast | 9.66e-09 | 3 |
bronchial epithelial cell | 1.04e-08 | 3 |
epithelial cell of prostate | 1.21e-08 | 3 |
respiratory epithelial cell | 8.59e-08 | 13 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.63e-23 | 4 |
breast cancer | 2.63e-23 | 4 |