FFCP PHASE1:Hg19::chr3:69811882..69811898,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt=C9J845 | |UniProt=C9J845 | ||
|association_with_transcript=7bp_to_ENST00000433517_5end | |association_with_transcript=7bp_to_ENST00000433517_5end | ||
|cluster_id=chr3:69811882..69811898,+ | |||
|description=CAGE_peak_6_at_MITF_5end | |description=CAGE_peak_6_at_MITF_5end | ||
|id=chr3:69811882..69811898,+ | |id=chr3:69811882..69811898,+ | ||
|ontology_enrichment_celltype=CL:1000497!1.90e-13!18;CL:0002518!1.90e-13!18;CL:1000449!1.52e-11!16;CL:1000507!1.61e-09!12;CL:1000494!1.61e-09!12;CL:0000066!3.79e-09!254;CL:0002681!1.95e-08!13;CL:0002584!1.95e-08!13;CL:0002194!3.42e-08!63;CL:0000576!3.42e-08!63;CL:0000040!3.42e-08!63;CL:0000559!3.42e-08!63;CL:0000860!1.10e-07!45;CL:0002009!1.11e-07!65;CL:0000839!2.74e-07!70;CL:0000557!4.56e-07!71 | |ontology_enrichment_celltype=CL:1000497!1.90e-13!18;CL:0002518!1.90e-13!18;CL:1000449!1.52e-11!16;CL:1000507!1.61e-09!12;CL:1000494!1.61e-09!12;CL:0000066!3.79e-09!254;CL:0002681!1.95e-08!13;CL:0002584!1.95e-08!13;CL:0002194!3.42e-08!63;CL:0000576!3.42e-08!63;CL:0000040!3.42e-08!63;CL:0000559!3.42e-08!63;CL:0000860!1.10e-07!45;CL:0002009!1.11e-07!65;CL:0000839!2.74e-07!70;CL:0000557!4.56e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.94e-26;17!CL:0002518;1.94e-26;17!CL:1000449;1.09e-25;15!CL:1000507;1.58e-22;10!CL:1000494;1.58e-22;10!CL:0002681;3.89e-18;12!CL:0002584;3.89e-18;12!CL:0000860;2.13e-10;33!CL:0002057;2.13e-10;33!CL:0000239;2.04e-09;3!CL:1000615;2.04e-09;3!CL:0002306;2.04e-09;3!CL:0002166;1.00e-08;3!CL:0000473;2.59e-08;39!CL:0000234;2.59e-08;39!CL:1000746;8.47e-07;7!CL:1000612;8.47e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.46e-26,17;CL:0002518,1.46e-26,17;CL:1000449,7.65e-26,15;CL:1000507,1.35e-22,10;CL:1000494,1.35e-22,10;CL:0002681,3.00e-18,12;CL:0002584,3.00e-18,12;CL:0002194,1.92e-10,59;CL:0000576,1.92e-10,59;CL:0000040,1.92e-10,59;CL:0000559,1.92e-10,59;CL:0000839,3.73e-10,66;CL:0002009,5.75e-10,61;CL:0000557,6.13e-10,67;CL:0000239,1.80e-09,3;CL:1000615,1.80e-09,3;CL:0002306,1.80e-09,3;CL:0000766,5.97e-09,72;CL:0002166,1.20e-08,3;CL:0000860,6.16e-08,42;CL:0002057,6.16e-08,42;CL:0000473,8.70e-08,48;CL:0000234,8.70e-08,48;CL:1000746,7.62e-07,7;CL:1000612,7.62e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.58e-10;3!DOID:127;3.58e-10;3!DOID:0060072;1.05e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.71e-10,3;DOID:127,3.71e-10,3;DOID:0060072,1.08e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003064!6.02e-15!37;UBERON:0006554!3.22e-13!44;UBERON:0001008!1.03e-12!45;UBERON:0004211!1.52e-11!16;UBERON:0001285!1.52e-11!16;UBERON:0007684!1.52e-11!16;UBERON:0003220!1.52e-11!16;UBERON:0004208!1.52e-11!16;UBERON:0000080!2.23e-11!18;UBERON:0002120!2.23e-11!18;UBERON:0004875!2.23e-11!18;UBERON:0005721!2.23e-11!18;UBERON:0005754!2.23e-11!18;UBERON:0007297!2.23e-11!18;UBERON:0006555!1.34e-10!17;UBERON:0005103!1.34e-10!17;UBERON:0000083!1.34e-10!17;UBERON:0009201!1.34e-10!17;UBERON:0004819!1.34e-10!17;UBERON:0006553!1.34e-10!17;UBERON:0003074!1.34e-10!17;UBERON:0003060!1.34e-10!17;UBERON:0004876!9.29e-10!20;UBERON:0009773!1.61e-09!12;UBERON:0001231!1.61e-09!12;UBERON:0004810!1.61e-09!12;UBERON:0002113!1.67e-09!27;UBERON:0003918!1.67e-09!27;UBERON:0005095!1.67e-09!27;UBERON:0007687!1.67e-09!27;UBERON:0001851!2.58e-09!16;UBERON:0003887!4.53e-09!21;UBERON:0003937!8.55e-09!12;UBERON:0005399!8.55e-09!12;UBERON:0000058!1.22e-08!26;UBERON:0001225!1.95e-08!13;UBERON:0008987!1.95e-08!13;UBERON:0002367!5.27e-08!11;UBERON:0010147!5.27e-08!11;UBERON:0009846!5.27e-08!11;UBERON:0003353!5.27e-08!11;UBERON:0004902!5.27e-08!11;UBERON:0003820!5.27e-08!11;UBERON:0009847!5.27e-08!11;UBERON:0005153!5.44e-08!37;UBERON:0000062!1.58e-07!511;UBERON:0002371!2.34e-07!80;UBERON:0000489!3.61e-07!32;UBERON:0004765!4.48e-07!101;UBERON:0001434!4.48e-07!101 | |ontology_enrichment_uberon=UBERON:0003064!6.02e-15!37;UBERON:0006554!3.22e-13!44;UBERON:0001008!1.03e-12!45;UBERON:0004211!1.52e-11!16;UBERON:0001285!1.52e-11!16;UBERON:0007684!1.52e-11!16;UBERON:0003220!1.52e-11!16;UBERON:0004208!1.52e-11!16;UBERON:0000080!2.23e-11!18;UBERON:0002120!2.23e-11!18;UBERON:0004875!2.23e-11!18;UBERON:0005721!2.23e-11!18;UBERON:0005754!2.23e-11!18;UBERON:0007297!2.23e-11!18;UBERON:0006555!1.34e-10!17;UBERON:0005103!1.34e-10!17;UBERON:0000083!1.34e-10!17;UBERON:0009201!1.34e-10!17;UBERON:0004819!1.34e-10!17;UBERON:0006553!1.34e-10!17;UBERON:0003074!1.34e-10!17;UBERON:0003060!1.34e-10!17;UBERON:0004876!9.29e-10!20;UBERON:0009773!1.61e-09!12;UBERON:0001231!1.61e-09!12;UBERON:0004810!1.61e-09!12;UBERON:0002113!1.67e-09!27;UBERON:0003918!1.67e-09!27;UBERON:0005095!1.67e-09!27;UBERON:0007687!1.67e-09!27;UBERON:0001851!2.58e-09!16;UBERON:0003887!4.53e-09!21;UBERON:0003937!8.55e-09!12;UBERON:0005399!8.55e-09!12;UBERON:0000058!1.22e-08!26;UBERON:0001225!1.95e-08!13;UBERON:0008987!1.95e-08!13;UBERON:0002367!5.27e-08!11;UBERON:0010147!5.27e-08!11;UBERON:0009846!5.27e-08!11;UBERON:0003353!5.27e-08!11;UBERON:0004902!5.27e-08!11;UBERON:0003820!5.27e-08!11;UBERON:0009847!5.27e-08!11;UBERON:0005153!5.44e-08!37;UBERON:0000062!1.58e-07!511;UBERON:0002371!2.34e-07!80;UBERON:0000489!3.61e-07!32;UBERON:0004765!4.48e-07!101;UBERON:0001434!4.48e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.09e-25;15!UBERON:0004819;1.09e-25;15!UBERON:0001285;1.09e-25;15!UBERON:0007684;1.09e-25;15!UBERON:0004211;1.58e-22;10!UBERON:0009773;1.58e-22;10!UBERON:0001231;1.58e-22;10!UBERON:0004810;1.58e-22;10!UBERON:0001225;3.89e-18;12!UBERON:0008987;3.89e-18;12!UBERON:0002113;9.19e-18;24!UBERON:0011143;9.19e-18;24!UBERON:0001851;1.30e-17;15!UBERON:0000489;3.82e-14;29!UBERON:0000353;3.88e-14;15!UBERON:0006554;1.44e-13;30!UBERON:0001008;1.44e-13;30!UBERON:0006853;2.04e-09;3!UBERON:0007685;2.04e-09;3!UBERON:0004134;2.04e-09;3!UBERON:0000074;8.47e-07;7!UBERON:0001229;8.47e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,7.65e-26,15;UBERON:0009773,7.65e-26,15;UBERON:0001231,7.65e-26,15;UBERON:0001285,7.65e-26,15;UBERON:0007684,7.65e-26,15;UBERON:0004208,7.65e-26,15;UBERON:0006555,4.85e-24,16;UBERON:0004819,4.85e-24,16;UBERON:0004810,1.35e-22,10;UBERON:0001225,3.00e-18,12;UBERON:0008987,3.00e-18,12;UBERON:0001851,9.91e-18,15;UBERON:0002113,3.18e-16,26;UBERON:0003918,3.18e-16,26;UBERON:0011143,3.18e-16,26;UBERON:0005095,3.18e-16,26;UBERON:0007687,3.18e-16,26;UBERON:0000353,3.16e-14,15;UBERON:0006554,9.96e-14,47;UBERON:0001008,2.37e-13,48;UBERON:0000489,4.32e-13,31;UBERON:0004765,1.57e-12,90;UBERON:0002371,7.21e-12,76;UBERON:0001434,1.12e-10,100;UBERON:0001474,1.29e-10,82;UBERON:0006853,1.80e-09,3;UBERON:0007685,1.80e-09,3;UBERON:0004134,1.80e-09,3;UBERON:0002405,9.34e-09,93;UBERON:0005172,1.06e-08,54;UBERON:0005173,1.06e-08,54;UBERON:0002390,4.70e-08,98;UBERON:0003061,4.70e-08,98;UBERON:0002417,1.75e-07,60;UBERON:0000916,1.75e-07,60;UBERON:0002193,7.38e-07,108;UBERON:0010532,7.62e-07,7;UBERON:0000074,7.62e-07,7;UBERON:0001229,7.62e-07,7;UBERON:0001230,7.62e-07,7;UBERON:0003220,7.62e-07,7;UBERON:0005749,7.62e-07,7;UBERON:0004199,7.62e-07,7;UBERON:0004209,7.62e-07,7;UBERON:0004198,7.62e-07,7;UBERON:0003064,8.57e-07,28 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0.491467873003018,3.48900583986214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.157421562627358,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,3.70051099219643,1.85823822537062,0.863077176966451,0.256160706529101,0.236482229888585,3.44745680736619,1.29096936716765,0,0.188242339542605,0.545812300115692,0.898893937780338,1.22433556948361,1.28371610830437,0,0,0,0,1.16083695451434,1.70215567407342,1.24564449799115,0.75374599577023,0,1.08594422352558,1.21079900526674,4.41933163185078,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88300474649071,0,0,0,0.221729397462564,0.43917392846563,0.0654895377488563,0,0,7.46459005405772,5.92041106817509,6.1160661838678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0.358779271377724,0,0,0,0.206105058476878,0.257640540045629,0.744467425326359,0,0,0,0.184099797284599,0,0,0,1.69560592310488,0,0.545492241181669,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.828147600278907,0.168584690078102,0,0,0.653638332277218,0.237270619111097,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0,0.614942192715568,1.20097467208968,1.09750285408626,0,0,0.0925884451585296,0,0,0,0,0.469634776943287,0,0,0.190254152234598,0,0,0.246217006087397,1.63802985597466,0.594524649154913,2.81201501960331,1.17587489739202,1.27597587518148,0.447792613514241,0,0.383382679165211,3.4486426652716,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07057393278297,0.946214490203608,1.28855556491985,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0,0,0,0,0,0,0,0,0,1.57117284469109,0,0.0920809889358963,0.918515585316854,0.546273504020151,0.786746489756545,1.35359883872224,24.7219232105171,7.0591479225917,1.46139224653261,13.2995052405023,0,0,4.53423423814493,1.54227252690289,3.25135725052623,0.501689773854853,4.33289664176565,1.66215201785745,4.25362033972139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,1.07923474549989,0.823611089208164,1.06031162111118,0,0,0,0,0,0,2.18399858252777,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.633322905892992,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0.311039587661807,2.51631383212515,0,0,0,0,3.33410970433911,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.384751292518985,0,0,0.0897576444097721,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,4.21996129056054,0.816164040795739,0.848118428603645,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27687636823834,0,0,0,0.0870592065804026,0,0,0.483781656445426,0.438535902517113,0.492692742319255,0,0,0,1.09633539717401,0,0,0,0.961905843018405,0,0.599428828746391,0,0,0,0,0.49701014226173,0,5.43616824294456,4.39331954511799,0.815985741090574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65983798109815,0,0,0.0674035438541849,0.295282444544246,2.7095466261051,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.950403028674658,0,0.383830394638891,0,0,0,4.3439968140297,6.04955043840887,9.47103344317287,0,0,0.170388021785422,0.679872549120754,0,0,0,0,0.342173675768659,0.704815022316672,0.106787412567695,0,0.414239055347196,0,2.56895121467328,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0.470531639396343,0,0,0.149254802886874,0,0,1.7046270474758,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.796191777397232,0.400027764663154,0,0,0,4.43025609936798,0.643324774124777,0,0,0.694567422971502,0.489473409012935,0.895444205407437,0.308801447160972,0.219284049578707,0.176689145945881,0,0,3.58738126023125,0,0.303859956177382,0,0,0.132864840313363,0,0,0,2.11312123358627,0,0,7.92188906439752,1.13503190713367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0.231051332300676,1.90691047733584,0,0,0,11.6988939848042,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,1.38280785066935,0,0,0,10.1646703160213,2.11339663594931,0.156986185701028,0,0.840816489941367,0,4.31855182437243,0.9555033757741,0,0,0,0,3.20684545892101,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88184358887261,0.722172300202514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|short_description=p6@MITF | |short_description=p6@MITF | ||
}} | }} |
Latest revision as of 12:08, 19 September 2015
Short description: | p6@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MITF_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000433517_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | C9J845 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.46e-26 | 17 |
kidney epithelial cell | 1.46e-26 | 17 |
epithelial cell of nephron | 7.65e-26 | 15 |
kidney tubule cell | 1.35e-22 | 10 |
nephron tubule epithelial cell | 1.35e-22 | 10 |
kidney cortical cell | 3.00e-18 | 12 |
renal cortical epithelial cell | 3.00e-18 | 12 |
monopoietic cell | 1.92e-10 | 59 |
monocyte | 1.92e-10 | 59 |
monoblast | 1.92e-10 | 59 |
promonocyte | 1.92e-10 | 59 |
myeloid lineage restricted progenitor cell | 3.73e-10 | 66 |
macrophage dendritic cell progenitor | 5.75e-10 | 61 |
granulocyte monocyte progenitor cell | 6.13e-10 | 67 |
brush border epithelial cell | 1.80e-09 | 3 |
kidney cortex tubule cell | 1.80e-09 | 3 |
epithelial cell of proximal tubule | 1.80e-09 | 3 |
myeloid leukocyte | 5.97e-09 | 72 |
epithelial cell of Malassez | 1.20e-08 | 3 |
classical monocyte | 6.16e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.16e-08 | 42 |
defensive cell | 8.70e-08 | 48 |
phagocyte | 8.70e-08 | 48 |
glomerular cell | 7.62e-07 | 7 |
kidney corpuscule cell | 7.62e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.71e-10 | 3 |
leiomyoma | 3.71e-10 | 3 |
benign neoplasm | 1.08e-07 | 4 |