FFCP PHASE1:Mm9::chr10:67000447..67000459,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=233 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:67000447..67000459,- | |||
|description=CAGE_peak_at_chr10:67000447..67000459,- | |description=CAGE_peak_at_chr10:67000447..67000459,- | ||
|id=chr10:67000447..67000459,- | |id=chr10:67000447..67000459,- | ||
|ontology_enrichment_celltype=CL:0000063!3.91e-11!66;CL:0002031!3.65e-07!25;CL:0000838!5.93e-07!12;CL:0002563!6.65e-07!9;CL:0002251!6.65e-07!9 | |ontology_enrichment_celltype=CL:0000063!3.91e-11!66;CL:0002031!3.65e-07!25;CL:0000838!5.93e-07!12;CL:0002563!6.65e-07!9;CL:0002251!6.65e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.48e-11,2;CL:0002491,3.48e-11,2;CL:0000098,3.48e-11,2;CL:0000893,3.46e-08,6;CL:0002489,3.46e-08,6;CL:0000898,3.46e-08,6;CL:0000809,3.46e-08,6;CL:0000810,3.46e-08,6;CL:0000895,3.46e-08,6;CL:0000808,3.46e-08,6;CL:0000894,3.46e-08,6;CL:0000806,3.46e-08,6;CL:0000807,3.46e-08,6;CL:0000805,3.46e-08,6;CL:0002425,3.46e-08,6;CL:0002436,3.46e-08,6;CL:0002427,3.46e-08,6;CL:0002428,3.46e-08,6;CL:0002429,3.46e-08,6;CL:0002433,3.46e-08,6;CL:0002431,3.46e-08,6;CL:0002432,3.46e-08,6;CL:0000075,5.60e-07,7;CL:0000838,5.62e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,9.32e-08,6;DOID:0060100,2.58e-07,3;DOID:4045,2.58e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000485!8.22e-09!11;UBERON:0003350!6.65e-07!9;UBERON:0004808!6.65e-07!9;UBERON:0001277!6.65e-07!9 | |ontology_enrichment_uberon=UBERON:0000485!8.22e-09!11;UBERON:0003350!6.65e-07!9;UBERON:0004808!6.65e-07!9;UBERON:0001277!6.65e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000058,7.30e-12,7;UBERON:0004766,3.48e-11,2;UBERON:0008193,3.48e-11,2;UBERON:0005913,3.48e-11,2;UBERON:0011158,3.48e-11,2;UBERON:0005744,3.48e-11,2;UBERON:0003457,3.48e-11,2;UBERON:0008001,3.48e-11,2;UBERON:0007497,3.48e-11,2;UBERON:0009955,3.48e-11,2;UBERON:0003067,3.48e-11,2;UBERON:0002546,3.48e-11,2;UBERON:0007914,3.48e-11,2;UBERON:0005253,3.48e-11,2;UBERON:0002227,3.48e-11,2;UBERON:0001846,3.48e-11,2;UBERON:0004339,3.48e-11,2;UBERON:0002105,3.48e-11,2;UBERON:0001678,3.48e-11,2;UBERON:0003128,3.48e-11,2;UBERON:0001694,3.48e-11,2;UBERON:0004681,3.48e-11,2;UBERON:0001839,3.48e-11,2;UBERON:0001690,3.48e-11,2;UBERON:0001844,3.48e-11,2;UBERON:0001849,3.48e-11,2;UBERON:0002499,3.48e-11,2;UBERON:0001855,3.48e-11,2;UBERON:0011137,3.48e-11,2;UBERON:0001703,3.48e-11,2;UBERON:0010323,3.48e-11,2;UBERON:0003129,3.48e-11,2;UBERON:0003069,3.48e-11,2;UBERON:0003051,3.48e-11,2;UBERON:0004637,3.48e-11,2;UBERON:0004761,3.48e-11,2;UBERON:0010113,3.48e-11,2;UBERON:0009123,3.48e-11,2;UBERON:0010351,3.48e-11,2;UBERON:0009617,3.48e-11,2;UBERON:0005641,3.48e-11,2;UBERON:0010349,3.48e-11,2;UBERON:0000485,1.69e-07,11;UBERON:0007524,2.06e-07,11;UBERON:0003077,2.06e-07,11;UBERON:0007285,2.06e-07,11 | |||
|phase1_expression=2.5623815536767,0.697950815278722,0,2.11724947914781,2.50447864973174,0.503637815735669,0.700837921786577,0.645616617207881,8.58811205125167,8.89445200023575,1.02730780935303,0.478632953972018,0.684802919724823,0.174840804837995,0.333109761815663,0,0,0.315462165358238,0.137114433605739,0.84877930359606,0,0.297872853602656,0.522399578277871,0,0,0.57423196411502,0.430761996159075,0.646413698057667,0,0,0,0,1.84519436275371,0,0.577703239502549,0.997407872150954,0.816677425049476,1.25559489221072,2.3440060335714,0.523523743973798,5.88231488031014,0.683045484958446,2.91306211818692,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,2.68452169692378,0,0,0.257259436035947,0,0,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,2.31891590961342,0,0,0,0,0,0,0.340860645156116,0.519572009205738,0.35333957451034,3.23939865486365,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0,0,0,0.125654352112864,0.347648640384553,0,0,0,0,0.373220911830279,3.53811861807145,0,0.130120442962704,0,0.180062129805349,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0.491804836130026,0,0,0,0,0.238968797952552,0.668396022247182,0,0,0,0,0,0,0,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0.713475270408282,1.48094118541909,0.304464949114599,0,0,0.220528398054962,0.49465875882444,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0,0.169978429993855,0.839708713941948,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0,0.515559547031063,1.37016503954128,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=2.5623815536767,0.697950815278722,0,2.11724947914781,2.50447864973174,0.503637815735669,0.700837921786577,0.645616617207881,8.58811205125167,8.89445200023575,1.02730780935303,0.478632953972018,0.684802919724823,0.174840804837995,0.333109761815663,0,0,0.315462165358238,0.137114433605739,0.84877930359606,0,0.297872853602656,0.522399578277871,0,0,0.57423196411502,0.430761996159075,0.646413698057667,0,0,0,0,1.84519436275371,0,0.577703239502549,0.997407872150954,0.816677425049476,1.25559489221072,2.3440060335714,0.523523743973798,5.88231488031014,0.683045484958446,2.91306211818692,0.125896817975577,0.202753862439029,0,0,0,0,0,0,0,2.68452169692378,0,0,0.257259436035947,0,0,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,2.31891590961342,0,0,0,0,0,0,0.340860645156116,0.519572009205738,0.35333957451034,3.23939865486365,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0,0,0,0.125654352112864,0.347648640384553,0,0,0,0,0.373220911830279,3.53811861807145,0,0.130120442962704,0,0.180062129805349,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0.491804836130026,0,0,0,0,0.238968797952552,0.668396022247182,0,0,0,0,0,0,0,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0.713475270408282,1.48094118541909,0.304464949114599,0,0,0.220528398054962,0.49465875882444,0,0.0603129249281559,0.119372344003136,0,0,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0,0.169978429993855,0.839708713941948,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0,0.515559547031063,1.37016503954128,0,0,0,0.453142408984205,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr10:67000447..67000459,- | |short_description=p@chr10:67000447..67000459,- | ||
}} | }} |
Latest revision as of 14:53, 4 August 2015
Short description: | p@chr10:67000447..67000459, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:67000447..67000459, - |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.48e-11 | 2 |
auditory epithelial cell | 3.48e-11 | 2 |
sensory epithelial cell | 3.48e-11 | 2 |
thymocyte | 3.46e-08 | 6 |
double negative thymocyte | 3.46e-08 | 6 |
naive T cell | 3.46e-08 | 6 |
double-positive, alpha-beta thymocyte | 3.46e-08 | 6 |
CD4-positive, alpha-beta thymocyte | 3.46e-08 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.46e-08 | 6 |
DN4 thymocyte | 3.46e-08 | 6 |
DN1 thymic pro-T cell | 3.46e-08 | 6 |
DN2 thymocyte | 3.46e-08 | 6 |
DN3 thymocyte | 3.46e-08 | 6 |
immature single positive thymocyte | 3.46e-08 | 6 |
early T lineage precursor | 3.46e-08 | 6 |
mature CD4 single-positive thymocyte | 3.46e-08 | 6 |
resting double-positive thymocyte | 3.46e-08 | 6 |
double-positive blast | 3.46e-08 | 6 |
CD69-positive double-positive thymocyte | 3.46e-08 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 3.46e-08 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.46e-08 | 6 |
CD24-positive, CD4 single-positive thymocyte | 3.46e-08 | 6 |
columnar/cuboidal epithelial cell | 5.60e-07 | 7 |
lymphoid lineage restricted progenitor cell | 5.62e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 9.32e-08 | 6 |
musculoskeletal system cancer | 2.58e-07 | 3 |
muscle cancer | 2.58e-07 | 3 |