FFCP PHASE1:Hg19::chr17:171082..171101,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3608 | |||
|description=CAGE_peak_at_chr17:171082..171101,+ | |||
|id=chr17:171082..171101,+ | |||
|ontology_enrichment_celltype=CL:1000507!4.89e-21!12;CL:1000494!4.89e-21!12;CL:1000449!1.61e-19!16;CL:0002681!2.25e-19!13;CL:0002584!2.25e-19!13;CL:1000497!3.73e-17!18;CL:0002518!3.73e-17!18;CL:0000239!5.67e-13!3;CL:1000615!5.67e-13!3;CL:0002306!5.67e-13!3;CL:0002322!3.98e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000650;9.93e-41;2!CL:1000500;9.93e-41;2!CL:1000618;9.93e-41;2!CL:1001318;9.93e-41;2!CL:0002173;9.93e-41;2!CL:1000507;4.87e-32;10!CL:1000494;4.87e-32;10!CL:0000322;3.11e-27;3!CL:0002681;8.56e-27;12!CL:0002584;8.56e-27;12!CL:1000449;1.54e-21;15!CL:0000669;6.02e-21;4!CL:1000497;4.60e-19;17!CL:0002518;4.60e-19;17!CL:1000746;2.06e-12;7!CL:1000612;2.06e-12;7!CL:0002202;9.24e-10;9!CL:0002632;9.24e-10;9!CL:0000239;5.54e-08;3!CL:1000615;5.54e-08;3!CL:0002306;5.54e-08;3!CL:0002368;4.95e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.98e-41,2;CL:1000500,8.98e-41,2;CL:1000618,8.98e-41,2;CL:1001318,8.98e-41,2;CL:0002173,8.98e-41,2;CL:1000507,3.98e-32,10;CL:1000494,3.98e-32,10;CL:0000322,3.56e-27,3;CL:0002681,7.25e-27,12;CL:0002584,7.25e-27,12;CL:1000449,1.35e-21,15;CL:0000669,5.72e-21,4;CL:1000497,4.10e-19,17;CL:0002518,4.10e-19,17;CL:1000746,2.00e-12,7;CL:1000612,2.00e-12,7;CL:0002202,9.65e-10,9;CL:0002632,9.65e-10,9;CL:0000239,5.18e-08,3;CL:1000615,5.18e-08,3;CL:0002306,5.18e-08,3;CL:0002368,5.11e-07,13 | |||
|ontology_enrichment_development_v019=UBERON:0003918;7.07e-09;10!UBERON:0007687;7.07e-09;10!UBERON:0003056;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;2.47e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.47e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000080!1.04e-25!18;UBERON:0002120!1.04e-25!18;UBERON:0004875!1.04e-25!18;UBERON:0005721!1.04e-25!18;UBERON:0005754!1.04e-25!18;UBERON:0007297!1.04e-25!18;UBERON:0000058!2.91e-24!26;UBERON:0002113!3.48e-23!27;UBERON:0003918!3.48e-23!27;UBERON:0005095!3.48e-23!27;UBERON:0007687!3.48e-23!27;UBERON:0004876!6.79e-23!20;UBERON:0006555!1.58e-22!17;UBERON:0005103!1.58e-22!17;UBERON:0000083!1.58e-22!17;UBERON:0009201!1.58e-22!17;UBERON:0004819!1.58e-22!17;UBERON:0006553!1.58e-22!17;UBERON:0003074!1.58e-22!17;UBERON:0003060!1.58e-22!17;UBERON:0003887!1.09e-21!21;UBERON:0009773!4.89e-21!12;UBERON:0001231!4.89e-21!12;UBERON:0004810!4.89e-21!12;UBERON:0004211!1.61e-19!16;UBERON:0001285!1.61e-19!16;UBERON:0007684!1.61e-19!16;UBERON:0003220!1.61e-19!16;UBERON:0004208!1.61e-19!16;UBERON:0001225!2.25e-19!13;UBERON:0008987!2.25e-19!13;UBERON:0000489!4.43e-19!32;UBERON:0001851!1.79e-15!16;UBERON:0006554!4.22e-15!44;UBERON:0001008!1.08e-14!45;UBERON:0000464!1.42e-14!104;UBERON:0000353!1.76e-14!17;UBERON:0003886!2.20e-14!63;UBERON:0002553!3.41e-14!70;UBERON:0003064!2.44e-13!37;UBERON:0006947!2.85e-13!3;UBERON:0004054!2.85e-13!3;UBERON:0005172!3.21e-13!55;UBERON:0005173!3.21e-13!55;UBERON:0006853!5.67e-13!3;UBERON:0007685!5.67e-13!3;UBERON:0004134!5.67e-13!3;UBERON:0000466!3.18e-12!126;UBERON:0002417!1.42e-11!61;UBERON:0000916!1.42e-11!61;UBERON:0005177!1.71e-11!107;UBERON:0009569!1.28e-10!113;UBERON:0005904!4.66e-10!4;UBERON:0000488!2.50e-09!4;UBERON:0003135!5.55e-09!11;UBERON:0003103!1.80e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;9.93e-41;2!UBERON:0003838;9.93e-41;2!UBERON:0003586;9.93e-41;2!UBERON:0005169;9.93e-41;2!UBERON:0002321;9.93e-41;2!UBERON:0005215;9.93e-41;2!UBERON:0002303;9.93e-41;2!UBERON:0002319;9.93e-41;2!UBERON:0004211;4.87e-32;10!UBERON:0009773;4.87e-32;10!UBERON:0001231;4.87e-32;10!UBERON:0004810;4.87e-32;10!UBERON:0002113;1.41e-29;24!UBERON:0011143;1.41e-29;24!UBERON:0004821;3.11e-27;3!UBERON:0007499;3.11e-27;3!UBERON:0003215;3.11e-27;3!UBERON:0010368;3.11e-27;3!UBERON:0009911;3.11e-27;3!UBERON:0002299;3.11e-27;3!UBERON:0006524;3.11e-27;3!UBERON:0008874;3.11e-27;3!UBERON:0002169;3.11e-27;3!UBERON:0004894;3.11e-27;3!UBERON:0001225;8.56e-27;12!UBERON:0008987;8.56e-27;12!UBERON:0000489;1.70e-24;29!UBERON:0006554;1.11e-23;30!UBERON:0001008;1.11e-23;30!UBERON:0001851;1.54e-21;15!UBERON:0006555;1.54e-21;15!UBERON:0000353;1.54e-21;15!UBERON:0004819;1.54e-21;15!UBERON:0001285;1.54e-21;15!UBERON:0007684;1.54e-21;15!UBERON:0001000;1.88e-21;1!UBERON:0005352;1.88e-21;1!UBERON:0003891;6.02e-21;4!UBERON:0009856;1.04e-20;4!UBERON:0000074;2.06e-12;7!UBERON:0001229;2.06e-12;7!UBERON:0004903;2.47e-11;2!UBERON:0002173;2.47e-11;2!UBERON:0002186;2.47e-11;2!UBERON:0005172;1.83e-09;52!UBERON:0005173;1.83e-09;52!UBERON:0000058;5.36e-09;10!UBERON:0006947;4.84e-08;3!UBERON:0004054;4.84e-08;3!UBERON:0006853;5.54e-08;3!UBERON:0007685;5.54e-08;3!UBERON:0004134;5.54e-08;3!UBERON:0005177;5.90e-08;99!UBERON:0002417;6.40e-07;58!UBERON:0000916;6.40e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,8.98e-41,2;UBERON:0003838,8.98e-41,2;UBERON:0003586,8.98e-41,2;UBERON:0005169,8.98e-41,2;UBERON:0002321,8.98e-41,2;UBERON:0005215,8.98e-41,2;UBERON:0002303,8.98e-41,2;UBERON:0002319,8.98e-41,2;UBERON:0004810,3.98e-32,10;UBERON:0002113,2.43e-27,26;UBERON:0003918,2.43e-27,26;UBERON:0011143,2.43e-27,26;UBERON:0005095,2.43e-27,26;UBERON:0007687,2.43e-27,26;UBERON:0004821,3.56e-27,3;UBERON:0003215,3.56e-27,3;UBERON:0010368,3.56e-27,3;UBERON:0009911,3.56e-27,3;UBERON:0002299,3.56e-27,3;UBERON:0006524,3.56e-27,3;UBERON:0008874,3.56e-27,3;UBERON:0002169,3.56e-27,3;UBERON:0004894,3.56e-27,3;UBERON:0001225,7.25e-27,12;UBERON:0008987,7.25e-27,12;UBERON:0000489,6.03e-23,31;UBERON:0001851,1.35e-21,15;UBERON:0004211,1.35e-21,15;UBERON:0009773,1.35e-21,15;UBERON:0000353,1.35e-21,15;UBERON:0001231,1.35e-21,15;UBERON:0001285,1.35e-21,15;UBERON:0007684,1.35e-21,15;UBERON:0004208,1.35e-21,15;UBERON:0001000,1.88e-21,1;UBERON:0005352,1.88e-21,1;UBERON:0003891,5.72e-21,4;UBERON:0006555,2.80e-20,16;UBERON:0004819,2.80e-20,16;UBERON:0000058,3.05e-17,19;UBERON:0006554,3.84e-15,47;UBERON:0001008,7.94e-15,48;UBERON:0005172,3.56e-13,54;UBERON:0005173,3.56e-13,54;UBERON:0010532,2.00e-12,7;UBERON:0000074,2.00e-12,7;UBERON:0001229,2.00e-12,7;UBERON:0001230,2.00e-12,7;UBERON:0003220,2.00e-12,7;UBERON:0005749,2.00e-12,7;UBERON:0004199,2.00e-12,7;UBERON:0004209,2.00e-12,7;UBERON:0004198,2.00e-12,7;UBERON:0005177,3.23e-12,101;UBERON:0002417,7.50e-12,60;UBERON:0000916,7.50e-12,60;UBERON:0004903,2.47e-11,2;UBERON:0002173,2.47e-11,2;UBERON:0002186,2.47e-11,2;UBERON:0005103,5.41e-11,8;UBERON:0000083,5.41e-11,8;UBERON:0009201,5.41e-11,8;UBERON:0006553,5.41e-11,8;UBERON:0003074,5.41e-11,8;UBERON:0003060,5.41e-11,8;UBERON:0009569,5.57e-11,112;UBERON:0003103,1.90e-10,68;UBERON:0000080,7.08e-10,9;UBERON:0002120,7.08e-10,9;UBERON:0004875,7.08e-10,9;UBERON:0005721,7.08e-10,9;UBERON:0005754,7.08e-10,9;UBERON:0007297,7.08e-10,9;UBERON:0004876,3.03e-08,11;UBERON:0006947,4.84e-08,3;UBERON:0004054,4.84e-08,3;UBERON:0006853,5.18e-08,3;UBERON:0007685,5.18e-08,3;UBERON:0004134,5.18e-08,3;UBERON:0003887,1.24e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.47440361900905,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80479845162965,0.616122696835318,0,0,0.527758144464379,0,0,0,0,2.43851793789468,9.03041592938736,0.509752546090077,3.3243040357149,0.447749509444357,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30529745380596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,6.31335044559025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,1.73372556058236,3.09482069996489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,2.287249413653,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0.513314034281235,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:171082..171101,+ | |||
}} |
Revision as of 12:53, 20 January 2014
Short description: | p@chr17:171082..171101, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:171082..171101, + |
Coexpression cluster: | C3608_Renal_ductus_bronchioalveolar_retina_kidney_seminal_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.98e-41 | 2 |
kidney interstitial cell | 8.98e-41 | 2 |
juxtaglomerular complex cell | 8.98e-41 | 2 |
renal interstitial pericyte | 8.98e-41 | 2 |
extraglomerular mesangial cell | 8.98e-41 | 2 |
kidney tubule cell | 3.98e-32 | 10 |
nephron tubule epithelial cell | 3.98e-32 | 10 |
pneumocyte | 3.56e-27 | 3 |
kidney cortical cell | 7.25e-27 | 12 |
renal cortical epithelial cell | 7.25e-27 | 12 |
epithelial cell of nephron | 1.35e-21 | 15 |
pericyte cell | 5.72e-21 | 4 |
kidney cell | 4.10e-19 | 17 |
kidney epithelial cell | 4.10e-19 | 17 |
glomerular cell | 2.00e-12 | 7 |
kidney corpuscule cell | 2.00e-12 | 7 |
epithelial cell of tracheobronchial tree | 9.65e-10 | 9 |
epithelial cell of lower respiratory tract | 9.65e-10 | 9 |
brush border epithelial cell | 5.18e-08 | 3 |
kidney cortex tubule cell | 5.18e-08 | 3 |
epithelial cell of proximal tubule | 5.18e-08 | 3 |
respiratory epithelial cell | 5.11e-07 | 13 |
Ontology term | p-value | n |
---|