FFCP PHASE1:Hg19::chr10:91043420..91043437,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:91043420..91043437,+
|short_description=p1@ENST00000444849
|description=CAGE_peak_1_at_ENST00000444849_5end
|association_with_transcript=26bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000444849_5end | |||
|cluster_id=chr10:91043420..91043437,+ | |||
|coexpression_cluster_id=C3056 | |||
|description=CAGE_peak_1_at_ENST00000444849_5end | |||
|id=chr10:91043420..91043437,+ | |||
|ontology_enrichment_celltype=CL:1000497!1.11e-12!18;CL:0002518!1.11e-12!18;CL:1000449!2.29e-10!16;CL:1000507!5.09e-10!12;CL:1000494!5.09e-10!12;CL:0002681!7.95e-09!13;CL:0002584!7.95e-09!13;CL:0000075!7.92e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:1000497;4.12e-43;17!CL:0002518;4.12e-43;17!CL:1000507;6.23e-43;10!CL:1000494;6.23e-43;10!CL:1000449;1.86e-34;15!CL:0002681;6.06e-28;12!CL:0002584;6.06e-28;12!CL:0000239;1.96e-17;3!CL:1000615;1.96e-17;3!CL:0002306;1.96e-17;3!CL:0002586;7.60e-17;3!CL:0002149;4.46e-14;6!CL:0002255;4.46e-14;6!CL:0000149;9.13e-13;4!CL:0000650;1.53e-11;2!CL:1000500;1.53e-11;2!CL:1000618;1.53e-11;2!CL:1001318;1.53e-11;2!CL:0002173;1.53e-11;2!CL:0000064;9.84e-08;3!CL:0000067;9.84e-08;3!CL:0005012;9.84e-08;3!CL:0002304;9.84e-08;3!CL:1000746;3.05e-07;7!CL:1000612;3.05e-07;7!CL:0000342;6.61e-07;1!CL:0002565;6.61e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.63e-43,17;CL:0002518,3.63e-43,17;CL:1000507,5.15e-43,10;CL:1000494,5.15e-43,10;CL:1000449,1.65e-34,15;CL:0002681,6.08e-28,12;CL:0002584,6.08e-28,12;CL:0000239,2.31e-17,3;CL:1000615,2.31e-17,3;CL:0002306,2.31e-17,3;CL:0002586,7.62e-17,3;CL:0002149,3.00e-14,6;CL:0002255,3.00e-14,6;CL:0000066,7.14e-13,253;CL:0000149,9.14e-13,4;CL:0000650,1.31e-11,2;CL:1000500,1.31e-11,2;CL:1000618,1.31e-11,2;CL:1001318,1.31e-11,2;CL:0002173,1.31e-11,2;CL:0000064,8.88e-08,3;CL:0000067,8.88e-08,3;CL:0005012,8.88e-08,3;CL:0002304,8.88e-08,3;CL:1000746,2.89e-07,7;CL:1000612,2.89e-07,7;CL:0000342,6.80e-07,1;CL:0002565,6.80e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.28e-08;10!UBERON:0007687;1.28e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;4.46e-14;6!DOID:4468;2.41e-12;2!DOID:120;6.51e-09;27!DOID:193;3.10e-08;29!DOID:299;3.79e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.00e-14,6;DOID:4468,2.42e-12,2;DOID:120,5.63e-09,27;DOID:193,2.71e-08,29;DOID:299,3.32e-07,25 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004211;6.23e-43;10!UBERON:0009773;6.23e-43;10!UBERON:0001231;6.23e-43;10!UBERON:0004810;6.23e-43;10!UBERON:0002113;5.75e-41;24!UBERON:0011143;5.75e-41;24!UBERON:0006555;1.86e-34;15!UBERON:0004819;1.86e-34;15!UBERON:0001285;1.86e-34;15!UBERON:0007684;1.86e-34;15!UBERON:0000489;2.19e-33;29!UBERON:0006554;3.58e-32;30!UBERON:0001008;3.58e-32;30!UBERON:0001225;6.06e-28;12!UBERON:0008987;6.06e-28;12!UBERON:0007625;1.07e-22;11!UBERON:0001851;4.12e-22;15!UBERON:0000353;4.12e-22;15!UBERON:0006853;1.96e-17;3!UBERON:0007685;1.96e-17;3!UBERON:0004134;1.96e-17;3!UBERON:0001781;7.60e-17;3!UBERON:0001782;7.60e-17;3!UBERON:0000019;8.98e-13;19!UBERON:0000047;8.98e-13;19!UBERON:0004088;8.98e-13;19!UBERON:0010230;8.98e-13;19!UBERON:0000488;2.06e-12;4!UBERON:0000970;4.33e-12;20!UBERON:0005172;1.04e-11;52!UBERON:0005173;1.04e-11;52!UBERON:0003567;1.53e-11;2!UBERON:0003838;1.53e-11;2!UBERON:0003586;1.53e-11;2!UBERON:0005169;1.53e-11;2!UBERON:0002321;1.53e-11;2!UBERON:0005215;1.53e-11;2!UBERON:0002303;1.53e-11;2!UBERON:0002319;1.53e-11;2!UBERON:0002104;1.80e-11;21!UBERON:0001456;1.80e-11;21!UBERON:0000020;2.14e-10;23!UBERON:0000966;2.62e-10;5!UBERON:0005388;2.62e-10;5!UBERON:0001802;2.62e-10;5!UBERON:0001032;6.32e-10;24!UBERON:0004456;6.32e-10;24!UBERON:0002417;1.93e-08;58!UBERON:0000916;1.93e-08;58!UBERON:0002203;1.96e-08;6!UBERON:0001768;1.96e-08;6!UBERON:0002200;1.96e-08;6!UBERON:0001778;9.84e-08;3!UBERON:0001775;9.84e-08;3!UBERON:0000995;1.33e-07;17!UBERON:0000074;3.05e-07;7!UBERON:0001229;3.05e-07;7!UBERON:0003975;3.64e-07;18!UBERON:0003103;5.63e-07;61!UBERON:0010371;5.63e-07;31!UBERON:0002506;6.61e-07;1!UBERON:0001769;6.61e-07;1 | |||
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|short_description=p1@ENST00000444849 | |||
}} | }} |
Latest revision as of 16:35, 23 July 2015
Short description: | p1@ENST00000444849 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000444849_5end |
Coexpression cluster: | C3056_epidermoid_Renal_anaplastic_clear_Iris_ductal_Retinal |
Association with transcript: | 26bp_to_ENST00000444849_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.63e-43 | 17 |
kidney epithelial cell | 3.63e-43 | 17 |
kidney tubule cell | 5.15e-43 | 10 |
nephron tubule epithelial cell | 5.15e-43 | 10 |
epithelial cell of nephron | 1.65e-34 | 15 |
kidney cortical cell | 6.08e-28 | 12 |
renal cortical epithelial cell | 6.08e-28 | 12 |
brush border epithelial cell | 2.31e-17 | 3 |
kidney cortex tubule cell | 2.31e-17 | 3 |
epithelial cell of proximal tubule | 2.31e-17 | 3 |
retinal pigment epithelial cell | 7.62e-17 | 3 |
epithelial cell of uterus | 3.00e-14 | 6 |
stromal cell of endometrium | 3.00e-14 | 6 |
epithelial cell | 7.14e-13 | 253 |
visual pigment cell | 9.14e-13 | 4 |
mesangial cell | 1.31e-11 | 2 |
kidney interstitial cell | 1.31e-11 | 2 |
juxtaglomerular complex cell | 1.31e-11 | 2 |
renal interstitial pericyte | 1.31e-11 | 2 |
extraglomerular mesangial cell | 1.31e-11 | 2 |
ciliated cell | 8.88e-08 | 3 |
ciliated epithelial cell | 8.88e-08 | 3 |
multi-ciliated epithelial cell | 8.88e-08 | 3 |
non-pigmented ciliary epithelial cell | 8.88e-08 | 3 |
glomerular cell | 2.89e-07 | 7 |
kidney corpuscule cell | 2.89e-07 | 7 |
pigment cell (sensu Vertebrata) | 6.80e-07 | 1 |
iris pigment epithelial cell | 6.80e-07 | 1 |
Ontology term | p-value | n |
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